FFCP PHASE1:Hg19::chr11:17297848..17297868,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:17297848..17297868,+
|short_description=p9@NUCB2
|description=CAGE_peak_9_at_NUCB2_5end
|association_with_transcript=-409bp_to_ENST00000525637_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4925 | |EntrezGene=4925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8044 | |HGNC=8044 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-409bp_to_ENST00000525637_5end | |||
|cluster_id=chr11:17297848..17297868,+ | |||
|description=CAGE_peak_9_at_NUCB2_5end | |||
|id=chr11:17297848..17297868,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.55e-10;2!CL:0000558;6.55e-10;2!CL:0000763;9.43e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.57e-23,108;CL:0000049,2.57e-23,108;CL:0000037,5.28e-22,168;CL:0000988,1.56e-20,177;CL:0002032,8.72e-20,161;CL:0000837,8.72e-20,161;CL:0000764,5.57e-10,2;CL:0000765,5.57e-10,2;CL:0000050,5.57e-10,2;CL:0000038,5.57e-10,2;CL:0000558,5.57e-10,2;CL:0000547,5.57e-10,2;CL:0000549,5.57e-10,2;CL:0000550,5.57e-10,2;CL:0000552,5.57e-10,2;CL:0000134,3.14e-08,354;CL:0002320,6.26e-08,361;CL:0000034,4.45e-07,441;CL:0000219,7.04e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;5.95e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.86e-28!51;DOID:0060083!1.86e-28!51;DOID:1240!2.17e-27!39;DOID:8692!1.81e-21!31;DOID:0050686!7.63e-15!137;DOID:14566!2.60e-14!239;DOID:162!1.02e-13!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.03e-64;31!DOID:1240;6.72e-58;39!DOID:2531;1.80e-39;51!DOID:0060083;1.80e-39;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.47e-77,39;DOID:8692,9.50e-69,31;DOID:2531,2.54e-62,51;DOID:0060083,2.54e-62,51;DOID:0050686,4.10e-19,137;DOID:162,1.47e-09,235;DOID:14566,3.12e-09,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.55e-10;2!UBERON:0005058;6.55e-10;2!UBERON:0009113;6.55e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.48e-11,4;UBERON:0005058,4.48e-11,4;UBERON:0009113,4.48e-11,4;UBERON:0003295,4.48e-11,4;UBERON:0005562,4.48e-11,4;UBERON:0002384,2.94e-08,371;UBERON:0003351,1.57e-07,6 | |||
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| ||
|short_description=p9@NUCB2 | |||
}} | }} |
Latest revision as of 00:02, 17 September 2015
Short description: | p9@NUCB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NUCB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -409bp_to_ENST00000525637_5end |
EntrezGene: | NUCB2 |
HGNC: | 8044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.57e-23 | 108 |
common myeloid progenitor | 2.57e-23 | 108 |
hematopoietic stem cell | 5.28e-22 | 168 |
hematopoietic cell | 1.56e-20 | 177 |
hematopoietic oligopotent progenitor cell | 8.72e-20 | 161 |
hematopoietic multipotent progenitor cell | 8.72e-20 | 161 |
erythroid lineage cell | 5.57e-10 | 2 |
erythroblast | 5.57e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 5.57e-10 | 2 |
erythroid progenitor cell | 5.57e-10 | 2 |
reticulocyte | 5.57e-10 | 2 |
proerythroblast | 5.57e-10 | 2 |
basophilic erythroblast | 5.57e-10 | 2 |
polychromatophilic erythroblast | 5.57e-10 | 2 |
orthochromatic erythroblast | 5.57e-10 | 2 |
mesenchymal cell | 3.14e-08 | 354 |
connective tissue cell | 6.26e-08 | 361 |
stem cell | 4.45e-07 | 441 |
motile cell | 7.04e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.48e-11 | 4 |
hemolymphoid system gland | 4.48e-11 | 4 |
thymic region | 4.48e-11 | 4 |
pharyngeal gland | 4.48e-11 | 4 |
thymus primordium | 4.48e-11 | 4 |
connective tissue | 2.94e-08 | 371 |
pharyngeal epithelium | 1.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.47e-77 | 39 |
myeloid leukemia | 9.50e-69 | 31 |
hematologic cancer | 2.54e-62 | 51 |
immune system cancer | 2.54e-62 | 51 |
organ system cancer | 4.10e-19 | 137 |
cancer | 1.47e-09 | 235 |
disease of cellular proliferation | 3.12e-09 | 239 |