FFCP PHASE1:Hg19::chr4:177190304..177190315,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:177190304..177190315,-
|short_description=p3@ASB5
|description=CAGE_peak_3_at_ASB5_5end
|association_with_transcript=-29bp_to_uc003iuq.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140458 | |EntrezGene=140458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17180 | |HGNC=17180 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWX0 | |UniProt=Q8WWX0 | ||
|association_with_transcript=-29bp_to_uc003iuq.1_5end | |||
|cluster_id=chr4:177190304..177190315,- | |||
|coexpression_cluster_id=C1107 | |||
|description=CAGE_peak_3_at_ASB5_5end | |||
|id=chr4:177190304..177190315,- | |||
|ontology_enrichment_celltype=CL:0000188!8.61e-24!9;CL:0000515!2.68e-15!4 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.16e-26;4!CL:0000680;3.73e-23;7!CL:0000515;1.07e-20;3!CL:0000188;1.15e-11;9!CL:0002321;1.02e-10;15!CL:0002622;1.53e-09;3!CL:0000228;1.04e-07;1!CL:0002372;1.04e-07;1!CL:0000222;1.59e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.28e-26,4;CL:0000188,1.01e-11,9;CL:0002622,1.71e-09,3;CL:0000228,1.04e-07,1;CL:0002372,1.04e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.16e-26;4!UBERON:0004874;5.90e-08;1!UBERON:0009143;1.04e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;5.04e-48;16!UBERON:0002036;5.04e-48;16!UBERON:0002385;1.85e-28;31!UBERON:0001015;1.85e-28;31!UBERON:0000383;1.85e-28;31!UBERON:0005090;1.31e-14;2!UBERON:0001630;1.31e-14;2!UBERON:0000341;2.55e-14;2!UBERON:0001723;5.13e-10;3!UBERON:0001033;5.13e-10;3!UBERON:0002426;3.55e-08;1!UBERON:0003831;3.55e-08;1!UBERON:0003898;3.55e-08;1!UBERON:0004830;3.55e-08;1!UBERON:0003830;3.55e-08;1!UBERON:0005175;3.55e-08;1!UBERON:0001774;3.55e-08;1!UBERON:0001103;3.55e-08;1!UBERON:0001389;3.93e-08;1!UBERON:0000026;3.93e-08;1!UBERON:0008784;3.93e-08;1!UBERON:0006058;3.93e-08;1!UBERON:0003663;3.93e-08;1!UBERON:0004256;3.93e-08;1!UBERON:0004708;3.93e-08;1!UBERON:0002101;3.93e-08;1!UBERON:0004709;3.93e-08;1!UBERON:0002529;3.93e-08;1!UBERON:0010538;3.93e-08;1!UBERON:0003661;3.93e-08;1!UBERON:0010890;3.93e-08;1!UBERON:0002471;3.93e-08;1!UBERON:0001383;3.93e-08;1!UBERON:0010758;3.93e-08;1!UBERON:0010707;3.93e-08;1!UBERON:0000978;3.93e-08;1!UBERON:0002103;3.93e-08;1!UBERON:0001665;3.93e-08;1!UBERON:0003823;3.93e-08;1!UBERON:0000154;3.93e-08;1!UBERON:0010709;3.93e-08;1!UBERON:0000989;5.90e-08;1!UBERON:0008811;5.90e-08;1!UBERON:0007029;1.04e-07;1!UBERON:0001301;1.59e-07;1!UBERON:0001282;1.59e-07;1!UBERON:0009842;1.59e-07;1!UBERON:0003704;1.59e-07;1!UBERON:0001171;1.59e-07;1!UBERON:0001172;1.59e-07;1!UBERON:0003101;4.55e-07;22!UBERON:0000079;4.55e-07;22 | |||
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| ||
|short_description=p3@ASB5 | |||
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Latest revision as of 22:19, 16 September 2015
Short description: | p3@ASB5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASB5_5end |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | -29bp_to_uc003iuq.1_5end |
EntrezGene: | ASB5 |
HGNC: | 17180 |
UniProt: | Q8WWX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.28e-26 | 4 |
cell of skeletal muscle | 1.01e-11 | 9 |
prostate stromal cell | 1.71e-09 | 3 |
multinucleate cell | 1.04e-07 | 1 |
myotube | 1.04e-07 | 1 |