FFCP PHASE1:Hg19::chr16:51185511..51185522,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:51185511..51185522,-
|short_description=p9@SALL1
|description=CAGE_peak_9_at_SALL1_5end
|association_with_transcript=-328bp_to_NM_002968,uc010cbv.2,uc010v...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6299 | |EntrezGene=6299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10524 | |HGNC=10524 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSC2 | |UniProt=Q9NSC2 | ||
|association_with_transcript=-328bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | |||
|cluster_id=chr16:51185511..51185522,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_9_at_SALL1_5end | |||
|id=chr16:51185511..51185522,- | |||
|ontology_enrichment_celltype=CL:1000507!5.86e-10!12;CL:1000494!5.86e-10!12;CL:0002322!3.54e-09!5;CL:0002319!6.37e-09!25;CL:1000497!3.12e-07!18;CL:0002518!3.12e-07!18;CL:1000449!6.10e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.68e-21;5!CL:0000239;1.56e-09;3!CL:1000615;1.56e-09;3!CL:0000346;1.56e-09;3!CL:1000428;1.56e-09;3!CL:0002306;1.56e-09;3!CL:0002321;4.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.77e-21,5;CL:0000346,1.21e-09,3;CL:1000428,1.21e-09,3;CL:0000239,1.50e-09,3;CL:1000615,1.50e-09,3;CL:0002306,1.50e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.38e-10;3!UBERON:0003057;4.38e-10;3!UBERON:0005425;9.07e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.75e-38!82;UBERON:0005743!5.47e-37!86;UBERON:0000073!1.11e-33!94;UBERON:0001016!1.11e-33!94;UBERON:0001049!1.89e-33!57;UBERON:0005068!1.89e-33!57;UBERON:0006241!1.89e-33!57;UBERON:0007135!1.89e-33!57;UBERON:0000955!4.15e-32!69;UBERON:0006238!4.15e-32!69;UBERON:0002616!9.74e-28!59;UBERON:0003080!2.17e-27!42;UBERON:0002780!3.69e-26!41;UBERON:0001890!3.69e-26!41;UBERON:0006240!3.69e-26!41;UBERON:0003075!1.61e-22!86;UBERON:0007284!1.61e-22!86;UBERON:0002346!3.43e-22!90;UBERON:0001893!3.37e-21!34;UBERON:0002791!3.33e-20!33;UBERON:0003056!1.04e-19!61;UBERON:0002020!2.40e-19!34;UBERON:0003528!2.40e-19!34;UBERON:0001869!1.78e-18!32;UBERON:0000153!7.90e-18!129;UBERON:0007811!7.90e-18!129;UBERON:0007023!1.22e-17!115;UBERON:0000033!2.38e-17!123;UBERON:0000924!8.96e-17!173;UBERON:0006601!8.96e-17!173;UBERON:0004121!1.02e-16!169;UBERON:0000956!9.65e-15!25;UBERON:0000203!9.65e-15!25;UBERON:0002619!2.27e-11!22;UBERON:0001950!6.99e-11!20;UBERON:0000489!1.77e-10!32;UBERON:0009773!5.86e-10!12;UBERON:0001231!5.86e-10!12;UBERON:0004810!5.86e-10!12;UBERON:0000475!6.95e-10!365;UBERON:0002298!7.88e-10!8;UBERON:0000025!1.80e-09!194;UBERON:0002113!1.64e-08!27;UBERON:0003918!1.64e-08!27;UBERON:0005095!1.64e-08!27;UBERON:0007687!1.64e-08!27;UBERON:0000062!1.99e-08!511;UBERON:0000200!2.18e-08!6;UBERON:0000483!7.68e-08!309;UBERON:0000119!1.32e-07!312;UBERON:0004111!1.64e-07!241;UBERON:0003076!2.29e-07!15;UBERON:0003057!2.29e-07!15;UBERON:0004211!6.10e-07!16;UBERON:0001285!6.10e-07!16;UBERON:0007684!6.10e-07!16;UBERON:0003220!6.10e-07!16;UBERON:0004208!6.10e-07!16;UBERON:0000468!7.68e-07!659;UBERON:0006554!8.66e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;1.91e-15;4!UBERON:0001905;2.29e-14;2!UBERON:0002757;2.29e-14;2!UBERON:0010134;2.29e-14;2!UBERON:0005408;2.29e-14;2!UBERON:0001899;2.29e-14;2!UBERON:0005162;7.50e-14;2!UBERON:0000122;7.50e-14;2!UBERON:0000489;2.14e-10;29!UBERON:0002240;4.38e-10;3!UBERON:0005174;4.38e-10;3!UBERON:0001137;4.38e-10;3!UBERON:0006853;1.56e-09;3!UBERON:0007685;1.56e-09;3!UBERON:0000412;1.56e-09;3!UBERON:0004134;1.56e-09;3!UBERON:0001992;1.56e-09;3!UBERON:0001894;4.84e-09;7!UBERON:0002336;9.07e-08;1!UBERON:0002038;9.07e-08;1!UBERON:0000941;9.07e-08;1!UBERON:0001785;9.07e-08;1!UBERON:0002464;9.07e-08;1!UBERON:0004904;9.07e-08;1!UBERON:0011215;9.07e-08;1!UBERON:0001018;9.07e-08;1!UBERON:0001021;9.07e-08;1!UBERON:0009661;9.07e-08;1!UBERON:0002950;9.07e-08;1!UBERON:0002473;9.07e-08;1!UBERON:0005340;9.07e-08;1!UBERON:0003544;9.07e-08;1!UBERON:0005970;9.07e-08;1!UBERON:0002316;9.07e-08;1!UBERON:0001020;9.07e-08;1!UBERON:0001891;9.07e-08;1!UBERON:0002437;9.07e-08;1!UBERON:0003296;1.31e-07;4!UBERON:0010133;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,4.61e-15,4;UBERON:0001905,3.92e-14,2;UBERON:0002757,3.92e-14,2;UBERON:0010134,3.92e-14,2;UBERON:0005408,3.92e-14,2;UBERON:0001899,3.92e-14,2;UBERON:0005162,4.18e-14,2;UBERON:0000122,4.18e-14,2;UBERON:0002240,4.80e-10,3;UBERON:0005174,4.80e-10,3;UBERON:0001137,4.80e-10,3;UBERON:0000489,9.70e-10,31;UBERON:0001049,1.17e-09,56;UBERON:0005068,1.17e-09,56;UBERON:0006241,1.17e-09,56;UBERON:0007135,1.17e-09,56;UBERON:0000412,1.21e-09,3;UBERON:0001992,1.21e-09,3;UBERON:0006853,1.50e-09,3;UBERON:0007685,1.50e-09,3;UBERON:0004134,1.50e-09,3;UBERON:0001894,7.94e-09,7;UBERON:0006222,7.94e-09,7;UBERON:0002038,4.99e-08,1;UBERON:0009661,4.99e-08,1;UBERON:0002950,4.99e-08,1;UBERON:0001891,4.99e-08,1;UBERON:0009616,4.99e-08,1;UBERON:0010286,4.99e-08,1;UBERON:0002336,5.70e-08,1;UBERON:0011215,5.70e-08,1;UBERON:0001018,5.70e-08,1;UBERON:0002473,5.70e-08,1;UBERON:0005340,5.70e-08,1;UBERON:0003544,5.70e-08,1;UBERON:0005970,5.70e-08,1;UBERON:0002316,5.70e-08,1;UBERON:0001020,5.70e-08,1;UBERON:0002437,5.70e-08,1;UBERON:0010314,5.73e-08,132;UBERON:0010371,6.36e-08,104;UBERON:0001016,7.15e-08,89;UBERON:0000941,7.97e-08,1;UBERON:0001785,7.97e-08,1;UBERON:0002464,7.97e-08,1;UBERON:0004904,7.97e-08,1;UBERON:0001021,7.97e-08,1;UBERON:0003902,7.97e-08,1;UBERON:0005425,7.97e-08,1;UBERON:0003296,1.70e-07,4;UBERON:0010133,1.70e-07,4;UBERON:0003075,1.83e-07,82;UBERON:0007284,1.83e-07,82;UBERON:0001017,1.90e-07,81;UBERON:0002346,4.93e-07,86 | |||
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| ||
|short_description=p9@SALL1 | |||
}} | }} |
Latest revision as of 21:38, 16 September 2015
Short description: | p9@SALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SALL1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -328bp_to_NM_002968, uc010cbv.2, uc010vgs.1_5end |
EntrezGene: | SALL1 |
HGNC: | 10524 |
UniProt: | Q9NSC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.77e-21 | 5 |
hair follicle dermal papilla cell | 1.21e-09 | 3 |
stem cell of epidermis | 1.21e-09 | 3 |
brush border epithelial cell | 1.50e-09 | 3 |
kidney cortex tubule cell | 1.50e-09 | 3 |
epithelial cell of proximal tubule | 1.50e-09 | 3 |