FFCP PHASE1:Hg19::chr9:19789028..19789050,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:19789028..19789050,-
|short_description=p1@SLC24A2
|description=CAGE_peak_1_at_SLC24A2_5end
|association_with_transcript=-220bp_to_uc003zod.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25769 | |EntrezGene=25769 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10976 | |HGNC=10976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-220bp_to_uc003zod.1_5end | |||
|cluster_id=chr9:19789028..19789050,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SLC24A2_5end | |||
|id=chr9:19789028..19789050,- | |||
|ontology_enrichment_celltype=CL:0000047!1.39e-10!8;CL:0000540!2.14e-08!6;CL:0000031!2.14e-08!6;CL:0000404!2.14e-08!6;CL:0002322!7.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.70e-12;6!CL:0000404;3.70e-12;6!CL:0002319;4.80e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.56e-15,8;CL:0000540,3.78e-12,6;CL:0000031,3.78e-12,6;CL:0000404,3.78e-12,6;CL:0002319,5.21e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-24;82!CL:0000031;3.70e-12;6!UBERON:0006241;4.94e-08;3!UBERON:0003057;4.94e-08;3!UBERON:0006215;1.44e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@SLC24A2 | |||
}} | }} |
Latest revision as of 21:29, 16 September 2015
Short description: | p1@SLC24A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC24A2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -220bp_to_uc003zod.1_5end |
EntrezGene: | SLC24A2 |
HGNC: | 10976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.56e-15 | 8 |
neuron | 3.78e-12 | 6 |
neuroblast | 3.78e-12 | 6 |
electrically signaling cell | 3.78e-12 | 6 |
neural cell | 5.21e-07 | 25 |