FFCP PHASE1:Hg19::chr12:121416455..121416479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6927 | |EntrezGene=6927 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11621 | |HGNC=11621 | ||
|TSSclassifier=strong | |||
|UniProt=E0YMK0,E0YMK1,E0YMJ5,F5H3Z5 | |UniProt=E0YMK0,E0YMK1,E0YMJ5,F5H3Z5 | ||
|association_with_transcript=1bp_to_ENST00000535955,ENST00000538626,ENST00000538646,ENST00000541924,ENST00000543427,ENST00000544574_5end | |association_with_transcript=1bp_to_ENST00000535955,ENST00000538626,ENST00000538646,ENST00000541924,ENST00000543427,ENST00000544574_5end | ||
|cluster_id=chr12:121416455..121416479,+ | |||
|coexpression_cluster_id=C3246 | |||
|description=CAGE_peak_2_at_HNF1A_5end | |description=CAGE_peak_2_at_HNF1A_5end | ||
|id=chr12:121416455..121416479,+ | |id=chr12:121416455..121416479,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.37e-23!12;CL:0000417!1.37e-23!12;CL:0000668!1.37e-23!12;CL:0000414!1.37e-23!12;CL:0000412!1.37e-23!12;CL:0000182!1.37e-23!12;CL:0000223!5.88e-14!59;CL:1000507!1.47e-08!12;CL:1000494!1.47e-08!12;CL:0000066!4.40e-08!254;CL:1000497!6.71e-08!18;CL:0002518!6.71e-08!18;CL:0002178!7.17e-07!3 | |ontology_enrichment_celltype=CL:0000181!1.37e-23!12;CL:0000417!1.37e-23!12;CL:0000668!1.37e-23!12;CL:0000414!1.37e-23!12;CL:0000412!1.37e-23!12;CL:0000182!1.37e-23!12;CL:0000223!5.88e-14!59;CL:1000507!1.47e-08!12;CL:1000494!1.47e-08!12;CL:0000066!4.40e-08!254;CL:1000497!6.71e-08!18;CL:0002518!6.71e-08!18;CL:0002178!7.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.39e-27;12!CL:0002563;3.01e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-27,12;CL:0000223,1.93e-14,58;CL:0002563,3.30e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.90e-44;13!UBERON:0004161;2.10e-40;11!UBERON:0001041;1.45e-18;30!UBERON:0003104;2.26e-17;31!UBERON:0006242;1.37e-10;1!CL:0000223;2.28e-09;58!UBERON:0006595;8.78e-08;86 | |||
|ontology_enrichment_disease=DOID:299!6.36e-10!25;DOID:3493!8.60e-10!2;DOID:305!1.41e-09!106;DOID:3119!9.82e-08!14;DOID:0050687!6.12e-07!143 | |ontology_enrichment_disease=DOID:299!6.36e-10!25;DOID:3493!8.60e-10!2;DOID:305!1.41e-09!106;DOID:3119!9.82e-08!14;DOID:0050687!6.12e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:7;3.18e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.87e-10,106;DOID:7,3.96e-08,39;DOID:0050687,3.05e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;2.45e-28;25!UBERON:0002107;5.55e-23;19!UBERON:0006925;5.55e-23;19!UBERON:0005409;1.24e-18;22!UBERON:0000160;8.95e-18;17!UBERON:0002108;5.92e-17;4!UBERON:0002365;1.47e-13;31!UBERON:0002330;1.47e-13;31!UBERON:0002368;3.46e-11;33!UBERON:0004921;5.02e-11;33!UBERON:0001242;3.01e-10;4!UBERON:0001262;3.01e-10;4!UBERON:0004786;3.01e-10;4!UBERON:0004808;3.01e-10;4!UBERON:0001277;3.01e-10;4!UBERON:0001007;2.64e-09;81!UBERON:0000949;2.13e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.42e-28,25;UBERON:0000015,2.42e-28,25;UBERON:0002423,2.42e-28,25;UBERON:0006235,2.42e-28,25;UBERON:0004161,2.42e-28,25;UBERON:0008835,1.43e-25,22;UBERON:0003894,1.43e-25,22;UBERON:0009854,2.02e-24,23;UBERON:0002107,5.55e-23,19;UBERON:0006925,5.55e-23,19;UBERON:0008836,5.55e-23,19;UBERON:0003929,1.70e-22,54;UBERON:0007499,2.15e-22,25;UBERON:0009856,1.70e-21,26;UBERON:0004921,2.28e-19,118;UBERON:0000160,9.79e-18,17;UBERON:0001007,2.26e-17,145;UBERON:0001555,2.26e-17,145;UBERON:0007026,2.26e-17,145;UBERON:0002108,7.36e-17,4;UBERON:0005911,1.00e-16,82;UBERON:0005409,2.14e-16,25;UBERON:0004119,1.75e-15,160;UBERON:0000925,1.75e-15,160;UBERON:0006595,1.75e-15,160;UBERON:0002365,8.06e-14,31;UBERON:0002330,8.06e-14,31;UBERON:0002368,3.70e-12,35;UBERON:0001242,3.30e-10,4;UBERON:0001262,3.30e-10,4;UBERON:0004786,3.30e-10,4;UBERON:0004808,3.30e-10,4;UBERON:0001277,3.30e-10,4;UBERON:0011216,4.39e-10,223;UBERON:0005172,6.70e-10,54;UBERON:0005173,6.70e-10,54;UBERON:0000949,2.72e-09,45;UBERON:0002530,5.45e-09,59;UBERON:0001041,5.60e-09,87;UBERON:0002417,8.28e-09,60;UBERON:0000916,8.28e-09,60;UBERON:0000490,5.73e-07,148 | |||
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| ||
|short_description=p2@HNF1A | |short_description=p2@HNF1A | ||
}} | }} |
Latest revision as of 21:06, 16 September 2015
Short description: | p2@HNF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNF1A_5end |
Coexpression cluster: | C3246_hepatoma_hepatocellular_rhabdomyosarcoma_hepatoblastoma_liver_Prostate_Intestinal |
Association with transcript: | 1bp_to_ENST00000535955, ENST00000538626, ENST00000538646, ENST00000541924, ENST00000543427, ENST00000544574_5end |
EntrezGene: | HNF1A |
HGNC: | 11621 |
UniProt: | E0YMK0E0YMK1E0YMJ5F5H3Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-27 | 12 |
endodermal cell | 1.93e-14 | 58 |
intestinal epithelial cell | 3.30e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.87e-10 | 106 |
disease of anatomical entity | 3.96e-08 | 39 |
cell type cancer | 3.05e-07 | 143 |