FFCP PHASE1:Hg19::chr13:24144796..24144809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55504 | |EntrezGene=55504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11915 | |HGNC=11915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS68 | |UniProt=Q9NS68 | ||
|association_with_transcript=0bp_to_ENST00000403372_5end | |association_with_transcript=0bp_to_ENST00000403372_5end | ||
|cluster_id=chr13:24144796..24144809,+ | |||
|coexpression_cluster_id=C1297 | |coexpression_cluster_id=C1297 | ||
|description=CAGE_peak_6_at_TNFRSF19_5end | |description=CAGE_peak_6_at_TNFRSF19_5end | ||
|id=chr13:24144796..24144809,+ | |id=chr13:24144796..24144809,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.30e-10;12!CL:0002566;7.26e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.38e-10,12;CL:0002566,7.85e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;7.06e-12;30!UBERON:0004161;1.46e-11;11!UBERON:0009497;8.30e-10;13!UBERON:0006298;3.44e-09;1!UBERON:0008801;3.44e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;2.21e-09;1!DOID:0050177;2.21e-09;1!DOID:0050427;2.21e-09;1!DOID:0050619;7.26e-09;1!DOID:1357;7.26e-09;1!DOID:3905;2.94e-08;9!DOID:0050615;7.56e-08;16!DOID:3908;3.74e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.04e-09,1;DOID:0050177,2.04e-09,1;DOID:0050427,2.04e-09,1;DOID:0050619,6.22e-09,1;DOID:1357,6.22e-09,1;DOID:3905,2.50e-08,9;DOID:0050615,6.47e-08,16;DOID:3908,3.68e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.86e-17;2!UBERON:0001829;1.17e-16;2!UBERON:0001044;1.70e-12;6!UBERON:0003293;1.70e-12;6!UBERON:0003294;1.70e-12;6!UBERON:0010047;1.70e-12;6!UBERON:0003408;1.70e-12;6!UBERON:0000167;1.70e-12;6!UBERON:0002365;4.21e-11;31!UBERON:0002330;4.21e-11;31!UBERON:0001831;3.44e-09;1!UBERON:0001736;3.44e-09;1!UBERON:0001567;3.44e-09;1!UBERON:0001764;7.26e-09;1!UBERON:0001825;7.26e-09;1!UBERON:0002107;9.58e-07;19!UBERON:0006925;9.58e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.19e-17,2;UBERON:0001829,1.17e-16,2;UBERON:0001044,1.70e-12,6;UBERON:0003293,1.70e-12,6;UBERON:0003294,1.70e-12,6;UBERON:0010047,1.70e-12,6;UBERON:0000167,1.70e-12,6;UBERON:0002365,1.32e-11,31;UBERON:0002330,1.32e-11,31;UBERON:0001041,7.78e-11,87;UBERON:0001831,3.05e-09,1;UBERON:0001567,3.05e-09,1;UBERON:0008801,3.05e-09,1;UBERON:0001736,3.88e-09,1;UBERON:0006298,3.88e-09,1;UBERON:0001764,6.22e-09,1;UBERON:0001825,6.22e-09,1;UBERON:0003408,1.09e-07,10;UBERON:0007499,1.29e-07,25;UBERON:0002530,2.16e-07,59;UBERON:0004921,2.35e-07,118;UBERON:0009856,2.57e-07,26;UBERON:0001004,3.17e-07,74;UBERON:0002107,9.96e-07,19;UBERON:0006925,9.96e-07,19;UBERON:0008836,9.96e-07,19 | |||
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| ||
|short_description=p6@TNFRSF19 | |short_description=p6@TNFRSF19 | ||
}} | }} |
Latest revision as of 20:55, 16 September 2015
Short description: | p6@TNFRSF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFRSF19_5end |
Coexpression cluster: | C1297_trachea_salivary_seminal_ductus_eye_submaxillary_throat |
Association with transcript: | 0bp_to_ENST00000403372_5end |
EntrezGene: | TNFRSF19 |
HGNC: | 11915 |
UniProt: | Q9NS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.38e-10 | 12 |
dark melanocyte | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.19e-17 | 2 |
major salivary gland | 1.17e-16 | 2 |
saliva-secreting gland | 1.70e-12 | 6 |
gland of oral region | 1.70e-12 | 6 |
gland of foregut | 1.70e-12 | 6 |
oral gland | 1.70e-12 | 6 |
oral cavity | 1.70e-12 | 6 |
exocrine gland | 1.32e-11 | 31 |
exocrine system | 1.32e-11 | 31 |
foregut | 7.78e-11 | 87 |
parotid gland | 3.05e-09 | 1 |
cheek | 3.05e-09 | 1 |
parotid gland primordium | 3.05e-09 | 1 |
submandibular gland | 3.88e-09 | 1 |
submandibular gland primordium | 3.88e-09 | 1 |
maxillary sinus | 6.22e-09 | 1 |
paranasal sinus | 6.22e-09 | 1 |
gland of gut | 1.09e-07 | 10 |
epithelial sac | 1.29e-07 | 25 |
gland | 2.16e-07 | 59 |
subdivision of digestive tract | 2.35e-07 | 118 |
sac | 2.57e-07 | 26 |
respiratory system | 3.17e-07 | 74 |
liver | 9.96e-07 | 19 |
digestive gland | 9.96e-07 | 19 |
liver bud | 9.96e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.04e-09 | 1 |
monogenic disease | 2.04e-09 | 1 |
xeroderma pigmentosum | 2.04e-09 | 1 |
paranasal sinus cancer | 6.22e-09 | 1 |
maxillary sinus cancer | 6.22e-09 | 1 |
lung carcinoma | 2.50e-08 | 9 |
respiratory system cancer | 6.47e-08 | 16 |
non-small cell lung carcinoma | 3.68e-07 | 5 |