FFCP PHASE1:Hg19::chr5:169122159..169122169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1794 | |EntrezGene=1794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2988 | |HGNC=2988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000523684_5end | |association_with_transcript=-13bp_to_ENST00000523684_5end | ||
|cluster_id=chr5:169122159..169122169,+ | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_5_at_DOCK2_5end | |description=CAGE_peak_5_at_DOCK2_5end | ||
|id=chr5:169122159..169122169,+ | |id=chr5:169122159..169122169,+ | ||
|ontology_enrichment_celltype=CL:1000497;2.48e-17;17!CL:0002518;2.48e-17;17!CL:1000507;7.90e-17;10!CL:1000494;7.90e-17;10!CL:1000449;1.92e-11;15!CL:0002262;2.85e-10;2!CL:1000398;2.85e-10;2!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0000346;2.88e-07;3!CL:1000428;2.88e-07;3!CL:0002306;2.88e-07;3!CL:0002681;6.74e-07;12!CL:0002584;6.74e-07;12 | |ontology_enrichment_celltype=CL:1000497!1.57e-09!18;CL:0002518!1.57e-09!18;CL:0000064!4.53e-09!3;CL:0005012!4.53e-09!3;CL:0000067!4.53e-09!3;CL:0002304!4.53e-09!3;CL:1000507!1.74e-08!12;CL:1000494!1.74e-08!12;CL:1000449!2.58e-08!16;CL:0000515!8.92e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:1000497;2.48e-17;17!CL:0002518;2.48e-17;17!CL:1000507;7.90e-17;10!CL:1000494;7.90e-17;10!CL:1000449;1.92e-11;15!CL:0002262;2.85e-10;2!CL:1000398;2.85e-10;2!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0000346;2.88e-07;3!CL:1000428;2.88e-07;3!CL:0002306;2.88e-07;3!CL:0002681;6.74e-07;12!CL:0002584;6.74e-07;12 | ||
|ontology_enrichment_disease=DOID:3093;4.64e-07;11 | |ontology_enrichment_celltype_v019_2=CL:1000497,3.06e-17,17;CL:0002518,3.06e-17,17;CL:1000507,1.06e-16,10;CL:1000494,1.06e-16,10;CL:1000449,2.34e-11,15;CL:0002262,2.99e-10,2;CL:1000398,2.99e-10,2;CL:0000346,2.63e-07,3;CL:1000428,2.63e-07,3;CL:0000239,3.35e-07,3;CL:1000615,3.35e-07,3;CL:0002306,3.35e-07,3;CL:0002681,7.59e-07,12;CL:0002584,7.59e-07,12 | ||
|ontology_enrichment_uberon=UBERON:0004211;7.90e-17;10!UBERON:0009773;7.90e-17;10!UBERON:0001231;7.90e-17;10!UBERON:0004810;7.90e-17;10!UBERON:0002113;2.17e-12;24!UBERON:0011143;2.17e-12;24!UBERON:0006555;1.92e-11;15!UBERON:0004819;1.92e-11;15!UBERON:0001285;1.92e-11;15!UBERON:0007684;1.92e-11;15!UBERON:0000353;2.30e-11;15!UBERON:0000489;2.60e-10;29!UBERON:0001281;2.85e-10;2!UBERON:0003497;2.85e-10;2!UBERON:0003909;2.85e-10;2!UBERON:0003835;2.85e-10;2!UBERON:0006554;5.59e-10;30!UBERON:0001008;5.59e-10;30!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0000412;2.88e-07;3!UBERON:0004134;2.88e-07;3!UBERON:0001992;2.88e-07;3!UBERON:0001280;2.88e-07;3!UBERON:0004647;2.88e-07;3!UBERON:0001225;6.74e-07;12!UBERON:0008987;6.74e-07;12 | |ontology_enrichment_development_v019=UBERON:0006238;1.26e-07;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;4.64e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.71e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.09e-12!11;UBERON:0000488!8.86e-12!4;UBERON:0001778!4.53e-09!3;UBERON:0001775!4.53e-09!3;UBERON:0009773!1.74e-08!12;UBERON:0001231!1.74e-08!12;UBERON:0004810!1.74e-08!12;UBERON:0004211!2.58e-08!16;UBERON:0001285!2.58e-08!16;UBERON:0007684!2.58e-08!16;UBERON:0003220!2.58e-08!16;UBERON:0004208!2.58e-08!16;UBERON:0002203!7.62e-08!6;UBERON:0001768!7.62e-08!6;UBERON:0006555!9.30e-08!17;UBERON:0005103!9.30e-08!17;UBERON:0000083!9.30e-08!17;UBERON:0009201!9.30e-08!17;UBERON:0004819!9.30e-08!17;UBERON:0006553!9.30e-08!17;UBERON:0003074!9.30e-08!17;UBERON:0003060!9.30e-08!17;UBERON:0000353!1.70e-07!17;UBERON:0000058!1.89e-07!26;UBERON:0002097!2.57e-07!40;UBERON:0000080!2.91e-07!18;UBERON:0002120!2.91e-07!18;UBERON:0004875!2.91e-07!18;UBERON:0005721!2.91e-07!18;UBERON:0005754!2.91e-07!18;UBERON:0007297!2.91e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.90e-17;10!UBERON:0009773;7.90e-17;10!UBERON:0001231;7.90e-17;10!UBERON:0004810;7.90e-17;10!UBERON:0002113;2.17e-12;24!UBERON:0011143;2.17e-12;24!UBERON:0006555;1.92e-11;15!UBERON:0004819;1.92e-11;15!UBERON:0001285;1.92e-11;15!UBERON:0007684;1.92e-11;15!UBERON:0000353;2.30e-11;15!UBERON:0000489;2.60e-10;29!UBERON:0001281;2.85e-10;2!UBERON:0003497;2.85e-10;2!UBERON:0003909;2.85e-10;2!UBERON:0003835;2.85e-10;2!UBERON:0006554;5.59e-10;30!UBERON:0001008;5.59e-10;30!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0000412;2.88e-07;3!UBERON:0004134;2.88e-07;3!UBERON:0001992;2.88e-07;3!UBERON:0001280;2.88e-07;3!UBERON:0004647;2.88e-07;3!UBERON:0001225;6.74e-07;12!UBERON:0008987;6.74e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.06e-16,10;UBERON:0002113,2.10e-11,26;UBERON:0003918,2.10e-11,26;UBERON:0011143,2.10e-11,26;UBERON:0005095,2.10e-11,26;UBERON:0007687,2.10e-11,26;UBERON:0004211,2.34e-11,15;UBERON:0009773,2.34e-11,15;UBERON:0001231,2.34e-11,15;UBERON:0001285,2.34e-11,15;UBERON:0007684,2.34e-11,15;UBERON:0004208,2.34e-11,15;UBERON:0000353,2.70e-11,15;UBERON:0006555,1.10e-10,16;UBERON:0004819,1.10e-10,16;UBERON:0001281,2.99e-10,2;UBERON:0003497,2.99e-10,2;UBERON:0003909,2.99e-10,2;UBERON:0003835,2.99e-10,2;UBERON:0000489,1.29e-09,31;UBERON:0005172,2.19e-08,54;UBERON:0005173,2.19e-08,54;UBERON:0002417,1.50e-07,60;UBERON:0000916,1.50e-07,60;UBERON:0000412,2.63e-07,3;UBERON:0001992,2.63e-07,3;UBERON:0001280,2.97e-07,3;UBERON:0004647,2.97e-07,3;UBERON:0005171,2.97e-07,3;UBERON:0006853,3.35e-07,3;UBERON:0007685,3.35e-07,3;UBERON:0004134,3.35e-07,3;UBERON:0001225,7.59e-07,12;UBERON:0008987,7.59e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0.451199612907412,1.15523005656622,0.784349769176855,0,2.21658420675039,0,0,0.863663664408557,0,0.270946437543853,0,1.01950509218015,0,0,0,0,0,0.984043937099117,0.325378394664303,0,0.183138929636687,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31037150325144,3.451893928307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0.226705925512272,0.694567422971502,0,1.4327107286519,0,0,0,0,0,0.512483037175893,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59113109462346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0.451199612907412,1.15523005656622,0.784349769176855,0,2.21658420675039,0,0,0.863663664408557,0,0.270946437543853,0,1.01950509218015,0,0,0,0,0,0.984043937099117,0.325378394664303,0,0.183138929636687,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31037150325144,3.451893928307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0.226705925512272,0.694567422971502,0,1.4327107286519,0,0,0,0,0,0.512483037175893,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59113109462346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@DOCK2 | |short_description=p5@DOCK2 | ||
}} | }} |
Latest revision as of 20:45, 16 September 2015
Short description: | p5@DOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DOCK2_5end |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | -13bp_to_ENST00000523684_5end |
EntrezGene: | DOCK2 |
HGNC: | 2988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.06e-17 | 17 |
kidney epithelial cell | 3.06e-17 | 17 |
kidney tubule cell | 1.06e-16 | 10 |
nephron tubule epithelial cell | 1.06e-16 | 10 |
epithelial cell of nephron | 2.34e-11 | 15 |
endothelial cell of sinusoid | 2.99e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.99e-10 | 2 |
hair follicle dermal papilla cell | 2.63e-07 | 3 |
stem cell of epidermis | 2.63e-07 | 3 |
brush border epithelial cell | 3.35e-07 | 3 |
kidney cortex tubule cell | 3.35e-07 | 3 |
epithelial cell of proximal tubule | 3.35e-07 | 3 |
kidney cortical cell | 7.59e-07 | 12 |
renal cortical epithelial cell | 7.59e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.06e-16 | 10 |
kidney | 2.10e-11 | 26 |
kidney mesenchyme | 2.10e-11 | 26 |
upper urinary tract | 2.10e-11 | 26 |
kidney rudiment | 2.10e-11 | 26 |
kidney field | 2.10e-11 | 26 |
nephron epithelium | 2.34e-11 | 15 |
renal tubule | 2.34e-11 | 15 |
nephron tubule | 2.34e-11 | 15 |
nephron | 2.34e-11 | 15 |
uriniferous tubule | 2.34e-11 | 15 |
nephrogenic mesenchyme | 2.34e-11 | 15 |
parenchyma | 2.70e-11 | 15 |
excretory tube | 1.10e-10 | 16 |
kidney epithelium | 1.10e-10 | 16 |
hepatic sinusoid | 2.99e-10 | 2 |
abdomen blood vessel | 2.99e-10 | 2 |
sinusoid | 2.99e-10 | 2 |
abdominal segment blood vessel | 2.99e-10 | 2 |
cavitated compound organ | 1.29e-09 | 31 |
abdomen element | 2.19e-08 | 54 |
abdominal segment element | 2.19e-08 | 54 |
abdominal segment of trunk | 1.50e-07 | 60 |
abdomen | 1.50e-07 | 60 |
dermal papilla | 2.63e-07 | 3 |
papillary layer of dermis | 2.63e-07 | 3 |
liver parenchyma | 2.97e-07 | 3 |
liver lobule | 2.97e-07 | 3 |
hepatic duct | 2.97e-07 | 3 |
renal cortex tubule | 3.35e-07 | 3 |
region of nephron tubule | 3.35e-07 | 3 |
proximal tubule | 3.35e-07 | 3 |
cortex of kidney | 7.59e-07 | 12 |
renal parenchyma | 7.59e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.71e-07 | 11 |