FFCP PHASE1:Hg19::chr4:174451596..174451632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79804 | |EntrezGene=79804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502334,ENST00000502896,ENST00000502941,ENST00000503198,ENST00000503309,ENST00000503474,ENST00000504740,ENST00000505032,ENST00000505621,ENST00000507322,ENST00000507571,ENST00000507636,ENST00000508534,ENST00000509640,ENST00000509866,ENST00000510221,ENST00000510339,ENST00000511196,ENST00000511728,ENST00000512209,ENST00000512246,ENST00000512943,ENST00000515345,ENST00000515350,ENST00000515376,ENST00000515741,NR_003679,uc003itj.2,uc003itk.2,uc003itl.3,uc010irf.2,uc010irg.2,uc010irh.2,uc010iri.2,uc010irj.2,uc010irk.2,uc010irl.2,uc010irm.2,uc010irn.2,uc011ckd.1_5end | |association_with_transcript=0bp_to_ENST00000502334,ENST00000502896,ENST00000502941,ENST00000503198,ENST00000503309,ENST00000503474,ENST00000504740,ENST00000505032,ENST00000505621,ENST00000507322,ENST00000507571,ENST00000507636,ENST00000508534,ENST00000509640,ENST00000509866,ENST00000510221,ENST00000510339,ENST00000511196,ENST00000511728,ENST00000512209,ENST00000512246,ENST00000512943,ENST00000515345,ENST00000515350,ENST00000515376,ENST00000515741,NR_003679,uc003itj.2,uc003itk.2,uc003itl.3,uc010irf.2,uc010irg.2,uc010irh.2,uc010iri.2,uc010irj.2,uc010irk.2,uc010irl.2,uc010irm.2,uc010irn.2,uc011ckd.1_5end | ||
|cluster_id=chr4:174451596..174451632,+ | |||
|coexpression_cluster_id=C4394 | |||
|description=CAGE_peak_1_at_NBLA00301_5end | |description=CAGE_peak_1_at_NBLA00301_5end | ||
|id=chr4:174451596..174451632,+ | |id=chr4:174451596..174451632,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.08e-09;19!CL:0002541;3.07e-08;3!CL:0002569;3.56e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.05e-09,19;CL:0002541,3.11e-08,3;CL:0002569,3.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.68e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.16e-08;3!DOID:127;1.16e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.12e-08,3;DOID:127,1.12e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.72e-11!27;UBERON:0007023!9.49e-10!115;UBERON:0004872!7.83e-09!84;UBERON:0000948!3.43e-08!24;UBERON:0005498!3.43e-08!24;UBERON:0004140!3.43e-08!24;UBERON:0009881!3.43e-08!24;UBERON:0004141!3.43e-08!24;UBERON:0003084!3.43e-08!24;UBERON:0007005!3.43e-08!24;UBERON:0004139!3.43e-08!24;UBERON:0004291!3.43e-08!24;UBERON:0003914!9.56e-08!118;UBERON:0000478!1.99e-07!24;UBERON:0000468!2.18e-07!659;UBERON:0000059!2.25e-07!11;UBERON:0001155!5.20e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.25e-14;25!UBERON:0000478;1.41e-10;24!UBERON:0000160;1.19e-09;17!UBERON:0000948;3.07e-09;22!UBERON:0005409;7.68e-09;22!UBERON:0004151;2.40e-08;3!UBERON:0003978;2.52e-08;3!UBERON:0000946;2.52e-08;3!UBERON:0003124;3.07e-08;3!UBERON:0000920;3.07e-08;3!UBERON:0000059;1.16e-07;11!UBERON:0003422;3.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.49e-12,27;UBERON:0000478,1.40e-10,24;UBERON:0000160,1.10e-09,17;UBERON:0007023,1.89e-08,114;UBERON:0004797,2.21e-08,7;UBERON:0004151,2.49e-08,3;UBERON:0003978,2.68e-08,3;UBERON:0009751,2.68e-08,3;UBERON:0000946,2.68e-08,3;UBERON:0002523,2.68e-08,3;UBERON:0005983,2.68e-08,3;UBERON:0002165,2.68e-08,3;UBERON:0002062,2.68e-08,3;UBERON:0007280,2.68e-08,3;UBERON:0000920,3.11e-08,3;UBERON:0000948,3.31e-08,24;UBERON:0005498,3.31e-08,24;UBERON:0004140,3.31e-08,24;UBERON:0009881,3.31e-08,24;UBERON:0004141,3.31e-08,24;UBERON:0003084,3.31e-08,24;UBERON:0007005,3.31e-08,24;UBERON:0004139,3.31e-08,24;UBERON:0004291,3.31e-08,24;UBERON:0000059,1.11e-07,11;UBERON:0005409,1.33e-07,25;UBERON:0003422,3.48e-07,6 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.02290049474824,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,2.29469296599051,1.06400514659507,1.12135520028461,0,0,4.35695449559673,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,4.04006673489759,4.62938523526267,0,0,0,0,0.794025282120147,0,0.213557388818567,0.211931901159562,0.600182192168805,1.13357782162283,0,0.37223371266318,0,0,0,2.48534726334208,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,1.96565443335525,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87815147273333,0,0,7.1803291477915,10.4007436911366,0,0,0,34.3147184779554,43.9523500367069,20.5810084195192,0,30.2083156431164,14.2551337128017,4.52159065589379,0.871533458600294,1.3996218765488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60643540767028,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.435050081742686,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0.429374660225974,0,0.316379424718726,1.71567174531442,0,0,0.95460974377781,0,1.2591072030832,0.823611089208164,0.589062011728432,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0.876901770507525,0,0,0,0,1.40847801266121,7.45739031461068,7.07393095294472,0,4.25713276884717,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.796991953004279,1.65770349318689,0,0,0,0.622079175323615,0,0,0,13.2182163553491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5428921361189,0,0,0,0,11.803042910081,14.0144317904849,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,20.9005005526486,14.595498143051,20.1639947828096,0,0.247127877893006,0,0.202203398942031,0,0,0,0,0,2.36750641709634,18.1486074072996,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,3.20063754411784,0,0,0,0,0,0,0,12.3802736948824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,19.5497680890578,20.3952777370398,2.15361907373044,13.5781720339314,28.3289191770137,11.6049157869774,44.7441926761597,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,22.1555551175744,18.5385751702321,0,20.6339848666411,6.91377192961014,38.5373084929103,0,0,0,0,2.93104467356165,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55668868129634,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0,0,0,0,0,0,0.265841714557995,0,1.35231848097497,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,171.225800497931,1.41539347670307,137.385724845554,0,15.9431190076262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1058891937792,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,2.63806866539431,0,1.60710550763486,0,0,0,21.7320806898465,0,0,0,0,0,0,4.78807866388135,0,0,47.4842534664938,0,0,1.6439605160631,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.237840181555137,0.5647304101948,0,0,4.86197196080051,8.52382285965433,0,17.8958274880351,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,4.3820183294791,0,0,0,0,0,17.4578857370082,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,1.06090177505535,0.267964130156178,0,0,0.639701945702943,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.763765899337979,0.404234377916439,0.870866991587845,0.342233301085281,0.5388164241167,0.573777643141411,1.66330178273007,0,0,0,0,9.38563769613817,24.0815645040247,19.1241203808397,1.99727032255654,0.201273793591026,0 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|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.02290049474824,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,2.29469296599051,1.06400514659507,1.12135520028461,0,0,4.35695449559673,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,4.04006673489759,4.62938523526267,0,0,0,0,0.794025282120147,0,0.213557388818567,0.211931901159562,0.600182192168805,1.13357782162283,0,0.37223371266318,0,0,0,2.48534726334208,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,1.96565443335525,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87815147273333,0,0,7.1803291477915,10.4007436911366,0,0,0,34.3147184779554,43.9523500367069,20.5810084195192,0,30.2083156431164,14.2551337128017,4.52159065589379,0.871533458600294,1.3996218765488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60643540767028,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.435050081742686,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0.429374660225974,0,0.316379424718726,1.71567174531442,0,0,0.95460974377781,0,1.2591072030832,0.823611089208164,0.589062011728432,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0.876901770507525,0,0,0,0,1.40847801266121,7.45739031461068,7.07393095294472,0,4.25713276884717,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.796991953004279,1.65770349318689,0,0,0,0.622079175323615,0,0,0,13.2182163553491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5428921361189,0,0,0,0,11.803042910081,14.0144317904849,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,20.9005005526486,14.595498143051,20.1639947828096,0,0.247127877893006,0,0.202203398942031,0,0,0,0,0,2.36750641709634,18.1486074072996,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,3.20063754411784,0,0,0,0,0,0,0,12.3802736948824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,19.5497680890578,20.3952777370398,2.15361907373044,13.5781720339314,28.3289191770137,11.6049157869774,44.7441926761597,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,22.1555551175744,18.5385751702321,0,20.6339848666411,6.91377192961014,38.5373084929103,0,0,0,0,2.93104467356165,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55668868129634,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0,0,0,0,0,0,0.265841714557995,0,1.35231848097497,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,171.225800497931,1.41539347670307,137.385724845554,0,15.9431190076262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1058891937792,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,2.63806866539431,0,1.60710550763486,0,0,0,21.7320806898465,0,0,0,0,0,0,4.78807866388135,0,0,47.4842534664938,0,0,1.6439605160631,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.237840181555137,0.5647304101948,0,0,4.86197196080051,8.52382285965433,0,17.8958274880351,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,4.3820183294791,0,0,0,0,0,17.4578857370082,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,1.06090177505535,0.267964130156178,0,0,0.639701945702943,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.763765899337979,0.404234377916439,0.870866991587845,0.342233301085281,0.5388164241167,0.573777643141411,1.66330178273007,0,0,0,0,9.38563769613817,24.0815645040247,19.1241203808397,1.99727032255654,0.201273793591026,0 | ||
|short_description=p1@NBLA00301 | |short_description=p1@NBLA00301 | ||
}} | }} |
Latest revision as of 19:37, 16 September 2015
Short description: | p1@NBLA00301 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NBLA00301_5end |
Coexpression cluster: | C4394_neuroblastoma_Mesenchymal_rectum_heart_neuroectodermal_leiomyoma_gall |
Association with transcript: | 0bp_to_ENST00000502334, ENST00000502896, ENST00000502941, ENST00000503198, ENST00000503309, ENST00000503474, ENST00000504740, ENST00000505032, ENST00000505621, ENST00000507322, ENST00000507571, ENST00000507636, ENST00000508534, ENST00000509640, ENST00000509866, ENST00000510221, ENST00000510339, ENST00000511196, ENST00000511728, ENST00000512209, ENST00000512246, ENST00000512943, ENST00000515345, ENST00000515350, ENST00000515376, ENST00000515741, NR_003679, uc003itj.2, uc003itk.2, uc003itl.3, uc010irf.2, uc010irg.2, uc010irh.2, uc010iri.2, uc010irj.2, uc010irk.2, uc010irl.2, uc010irm.2, uc010irn.2, uc011ckd.1_5end |
EntrezGene: | NBLA00301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.05e-09 | 19 |
chorionic membrane mesenchymal stem cell | 3.11e-08 | 3 |
mesenchymal stem cell of umbilical cord | 3.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.49e-12 | 27 |
extraembryonic structure | 1.40e-10 | 24 |
intestine | 1.10e-09 | 17 |
adult organism | 1.89e-08 | 114 |
blood vessel layer | 2.21e-08 | 7 |
cardiac chamber | 2.49e-08 | 3 |
valve | 2.68e-08 | 3 |
cardiac mesenchyme | 2.68e-08 | 3 |
cardial valve | 2.68e-08 | 3 |
tunica intima | 2.68e-08 | 3 |
heart layer | 2.68e-08 | 3 |
endocardium | 2.68e-08 | 3 |
endocardial cushion | 2.68e-08 | 3 |
presumptive endocardium | 2.68e-08 | 3 |
egg chorion | 3.11e-08 | 3 |
heart | 3.31e-08 | 24 |
primitive heart tube | 3.31e-08 | 24 |
primary heart field | 3.31e-08 | 24 |
anterior lateral plate mesoderm | 3.31e-08 | 24 |
heart tube | 3.31e-08 | 24 |
heart primordium | 3.31e-08 | 24 |
cardiac mesoderm | 3.31e-08 | 24 |
cardiogenic plate | 3.31e-08 | 24 |
heart rudiment | 3.31e-08 | 24 |
large intestine | 1.11e-07 | 11 |
gastrointestinal system | 1.33e-07 | 25 |
mesenchyme of umbilical cord | 3.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.12e-08 | 3 |
leiomyoma | 1.12e-08 | 3 |