FFCP PHASE1:Hg19::chr4:174451350..174451363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9464 | |EntrezGene=9464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4808 | |HGNC=4808 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505300,uc010ire.1_5end | |association_with_transcript=0bp_to_ENST00000505300,uc010ire.1_5end | ||
|cluster_id=chr4:174451350..174451363,- | |||
|coexpression_cluster_id=C4394 | |coexpression_cluster_id=C4394 | ||
|description=CAGE_peak_3_at_HAND2_5end | |description=CAGE_peak_3_at_HAND2_5end | ||
|id=chr4:174451350..174451363,- | |id=chr4:174451350..174451363,- | ||
|ontology_enrichment_celltype=CL:0000055!9.00e-13!180;CL:0000187!4.80e-11!54;CL:0000192!1.08e-10!42;CL:0000514!1.08e-10!42;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000393!8.94e-10!60;CL:0000211!8.94e-10!60;CL:0000183!4.62e-09!59;CL:0000057!2.40e-08!75;CL:0000359!1.14e-07!32;CL:0002494!1.39e-07!16 | |ontology_enrichment_celltype=CL:0000055!9.00e-13!180;CL:0000187!4.80e-11!54;CL:0000192!1.08e-10!42;CL:0000514!1.08e-10!42;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000393!8.94e-10!60;CL:0000211!8.94e-10!60;CL:0000183!4.62e-09!59;CL:0000057!2.40e-08!75;CL:0000359!1.14e-07!32;CL:0002494!1.39e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.01e-14;19!CL:0000333;5.95e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.32e-13,19;CL:0000192,6.70e-08,43;CL:0000514,6.70e-08,43;CL:0000187,5.09e-07,55;CL:0000136,7.58e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.94e-18!84;UBERON:0007100!5.02e-16!27;UBERON:0000948!2.00e-13!24;UBERON:0005498!2.00e-13!24;UBERON:0004140!2.00e-13!24;UBERON:0009881!2.00e-13!24;UBERON:0004141!2.00e-13!24;UBERON:0003084!2.00e-13!24;UBERON:0007005!2.00e-13!24;UBERON:0004139!2.00e-13!24;UBERON:0004291!2.00e-13!24;UBERON:0000478!1.97e-12!24;UBERON:0002385!4.05e-11!63;UBERON:0001015!4.05e-11!63;UBERON:0000383!4.05e-11!63;UBERON:0001009!1.44e-10!113;UBERON:0004290!1.96e-10!70;UBERON:0004923!2.64e-10!57;UBERON:0003914!3.86e-10!118;UBERON:0001981!4.15e-10!60;UBERON:0007500!4.15e-10!60;UBERON:0004537!4.15e-10!60;UBERON:0006965!4.15e-10!60;UBERON:0001134!5.26e-10!61;UBERON:0002036!5.26e-10!61;UBERON:0003082!5.26e-10!61;UBERON:0001637!1.30e-09!42;UBERON:0003509!1.30e-09!42;UBERON:0004572!1.30e-09!42;UBERON:0005631!2.99e-09!14;UBERON:0000158!2.99e-09!14;UBERON:0000468!3.77e-09!659;UBERON:0004535!4.04e-09!110;UBERON:0000914!5.89e-09!83;UBERON:0002329!5.89e-09!83;UBERON:0003077!5.89e-09!83;UBERON:0003059!5.89e-09!83;UBERON:0007282!5.89e-09!83;UBERON:0009618!5.89e-09!83;UBERON:0007285!5.89e-09!83;UBERON:0000486!5.93e-08!82;UBERON:0000055!8.00e-08!69;UBERON:0000926!8.31e-08!448;UBERON:0004120!8.31e-08!448;UBERON:0006603!8.31e-08!448;UBERON:0004573!5.02e-07!33;UBERON:0004571!5.02e-07!33 | |ontology_enrichment_uberon=UBERON:0004872!2.94e-18!84;UBERON:0007100!5.02e-16!27;UBERON:0000948!2.00e-13!24;UBERON:0005498!2.00e-13!24;UBERON:0004140!2.00e-13!24;UBERON:0009881!2.00e-13!24;UBERON:0004141!2.00e-13!24;UBERON:0003084!2.00e-13!24;UBERON:0007005!2.00e-13!24;UBERON:0004139!2.00e-13!24;UBERON:0004291!2.00e-13!24;UBERON:0000478!1.97e-12!24;UBERON:0002385!4.05e-11!63;UBERON:0001015!4.05e-11!63;UBERON:0000383!4.05e-11!63;UBERON:0001009!1.44e-10!113;UBERON:0004290!1.96e-10!70;UBERON:0004923!2.64e-10!57;UBERON:0003914!3.86e-10!118;UBERON:0001981!4.15e-10!60;UBERON:0007500!4.15e-10!60;UBERON:0004537!4.15e-10!60;UBERON:0006965!4.15e-10!60;UBERON:0001134!5.26e-10!61;UBERON:0002036!5.26e-10!61;UBERON:0003082!5.26e-10!61;UBERON:0001637!1.30e-09!42;UBERON:0003509!1.30e-09!42;UBERON:0004572!1.30e-09!42;UBERON:0005631!2.99e-09!14;UBERON:0000158!2.99e-09!14;UBERON:0000468!3.77e-09!659;UBERON:0004535!4.04e-09!110;UBERON:0000914!5.89e-09!83;UBERON:0002329!5.89e-09!83;UBERON:0003077!5.89e-09!83;UBERON:0003059!5.89e-09!83;UBERON:0007282!5.89e-09!83;UBERON:0009618!5.89e-09!83;UBERON:0007285!5.89e-09!83;UBERON:0000486!5.93e-08!82;UBERON:0000055!8.00e-08!69;UBERON:0000926!8.31e-08!448;UBERON:0004120!8.31e-08!448;UBERON:0006603!8.31e-08!448;UBERON:0004573!5.02e-07!33;UBERON:0004571!5.02e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-15;24!UBERON:0007100;2.30e-13;25!UBERON:0000948;3.69e-10;22!UBERON:0005631;1.01e-09;10!UBERON:0000158;1.01e-09;10!UBERON:0000013;5.95e-07;5!UBERON:0002410;5.95e-07;5!UBERON:0000160;6.33e-07;17!UBERON:0000059;8.10e-07;11!UBERON:0000305;8.10e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.85e-15,27;UBERON:0000478,9.89e-15,24;UBERON:0004872,5.55e-13,83;UBERON:0005631,2.27e-12,14;UBERON:0000158,2.27e-12,14;UBERON:0000948,1.75e-11,24;UBERON:0005498,1.75e-11,24;UBERON:0004140,1.75e-11,24;UBERON:0009881,1.75e-11,24;UBERON:0004141,1.75e-11,24;UBERON:0003084,1.75e-11,24;UBERON:0007005,1.75e-11,24;UBERON:0004139,1.75e-11,24;UBERON:0004291,1.75e-11,24;UBERON:0003914,2.93e-10,117;UBERON:0004797,2.51e-08,7;UBERON:0001009,3.33e-08,112;UBERON:0003124,1.98e-07,7;UBERON:0000013,4.43e-07,5;UBERON:0002410,4.43e-07,5;UBERON:0000160,5.31e-07,17;UBERON:0007500,5.83e-07,59;UBERON:0001981,5.83e-07,59;UBERON:0004537,5.83e-07,59;UBERON:0006965,5.83e-07,59;UBERON:0000059,6.64e-07,11;UBERON:0000926,9.40e-07,315;UBERON:0004120,9.40e-07,315;UBERON:0006603,9.40e-07,315 | |||
|phase1_expression=3.45188920614058,5.35251309727458,4.22863212287913,7.00513088471913,5.81049422755474,2.61701557230111,5.06599756336621,1.26343974685366,0.522371256399677,0,0,1.31064823278103,1.05506791291381,0.37129905888014,0.662794751455832,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,3.35350429851818,2.30152611318355,0,0,0.144846518960824,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,1.67799774483962,0,0.626984899610432,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,3.03913227994991,2.25095607382472,2.58152958673932,5.67469411517371,6.72813120170769,0,0.49333509683432,6.84664277879486,2.15537075311501,3.59616186849609,0,0,0,0,0.570471821544449,1.64393548606981,0.469737994575059,0.323745888736263,0.561803226808994,0,0,0,0,0,1.82032272387605,0,4.54507507675979,5.38009635449446,0,0,0,0,2.26864366320042,0.89694817844431,8.11518077510556,1.48352330811693,0.900273288253207,4.01904864029912,0.772921620136887,1.48893485065272,0,0.68205903612839,1.7670364197088,10.0334389520106,0,0.355009592516614,1.10827308050404,0.169560592310488,0,0,0,0,0,1.85910308591229,0.725627385107593,0.504641701751257,0,0,0.643240938192885,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,8.6430542379594,11.7606969108434,0,0,7.68026878685825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78305348303778,0,0,6.11657668145202,10.4007436911366,1.02882949704857,0,1.3321108950805,26.5939068204154,72.1686735170619,46.1014588597231,0.325736184293735,31.6298834380866,16.630989331602,5.12446941001296,2.61460037580088,2.19940580600526,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,5.11608369537122,0,1.03473071292505,0,1.84369168541703,0,0,0,0,0,0,1.21251028578504,1.66435439510497,2.11673205330776,0.744323423456331,1.38115775959256,1.68396056659844,1.79394808957981,2.55853624533352,0.804269605718038,0,1.07946785661859,0.710246901252508,1.47828880824856,2.07701771673448,1.51073491997947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,3.29731237272711,0.0915694648183434,0.082509499920588,0,0,0,0.580024309752732,0,0,0,0.644521469209642,0.870100163485371,0,0.712256285173899,0,0,0,0,1.39453664789186,0.31481234683064,2.7881490806424,8.00887308457831,1.06461206063404,2.60979897622522,0.9266210955196,2.86249773483982,0.372158369359667,0,3.0500831027812,0.255897791311334,0,5.40945521474092,0,2.87795932133304,8.23611089208164,2.82749765629647,0.606547444719948,9.5106192703805,0.421258456238981,3.90106991271672,0,0,0.136499911407986,2.96951407102797,2.26016233240486,2.75682671773062,1.32687795048244,3.5076070820301,0,0.655894752046633,0.608731130888112,3.717881977197,5.07052084558035,11.3294968241201,8.15467040408906,0.35667105148125,1.06428319221179,1.68886108238131,0,0,0,0,0.670302275535787,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,3.81991175580304,1.18785872333055,1.22864280839693,0,0,0,0,0,11.556383318562,6.07824614168525,0,0,0,1.55519793830904,0,0,0,10.6534878087888,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,1.45802306691627,0,0,0,0,0,0,0,0,0,13.2354444626531,0,0,0,0,7.97502899329799,10.9917112082235,2.13213910407454,0,0,0,1.1279783030859,1.76456280885966,1.67821586975843,0.189753732724185,0,0,0,0,0,38.8152153120617,13.9762951915276,12.8316330436061,2.37216902944498,0.988511511572023,0.417687798021821,0.067401132980677,0.802577647298789,0,0,0,0,2.76209081994573,21.7783288887595,0,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,3.31980669659857,0,0,0,0,5.04342885739781,0,0.225980740780532,0,0,0,0,0,37.3542740793867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14882720709979,0,20.1083328916023,32.3116197856474,5.74298419661451,25.3592330633719,49.3609955357056,45.0806344032583,49.0439349153102,10.4486966227297,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0,29.302508381308,34.4287824590024,0,13.5749900438428,6.04955043840887,16.002780645361,0,0,0.170388021785422,0,4.39656701034247,7.95041333473328,0,0,0,0,0,0.157204305099666,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0.856396000634902,0,4.21501415226193,0.144921028610825,1.34329322598187,0,1.10961172300523,4.16686611605196,3.0188148210309,1.77962244319307,0.228840068396924,3.4783112465545,0.777186002913902,0.443565449968902,0.318593534327405,0.899606224327209,0.465788870628778,0,0,0,6.61133479587761,3.80805212168795,0.406870733204662,0.363697318405119,2.57785336901972,0.464033759878494,0.796191777397232,0,1.71697852591396,1.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| ||
|short_description=p3@HAND2 | |short_description=p3@HAND2 | ||
}} | }} |
Latest revision as of 19:33, 16 September 2015
Short description: | p3@HAND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAND2_5end |
Coexpression cluster: | C4394_neuroblastoma_Mesenchymal_rectum_heart_neuroectodermal_leiomyoma_gall |
Association with transcript: | 0bp_to_ENST00000505300, uc010ire.1_5end |
EntrezGene: | HAND2 |
HGNC: | 4808 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.32e-13 | 19 |
smooth muscle cell | 6.70e-08 | 43 |
smooth muscle myoblast | 6.70e-08 | 43 |
muscle cell | 5.09e-07 | 55 |
fat cell | 7.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.85e-15 | 27 |
extraembryonic structure | 9.89e-15 | 24 |
splanchnic layer of lateral plate mesoderm | 5.55e-13 | 83 |
extraembryonic membrane | 2.27e-12 | 14 |
membranous layer | 2.27e-12 | 14 |
heart | 1.75e-11 | 24 |
primitive heart tube | 1.75e-11 | 24 |
primary heart field | 1.75e-11 | 24 |
anterior lateral plate mesoderm | 1.75e-11 | 24 |
heart tube | 1.75e-11 | 24 |
heart primordium | 1.75e-11 | 24 |
cardiac mesoderm | 1.75e-11 | 24 |
cardiogenic plate | 1.75e-11 | 24 |
heart rudiment | 1.75e-11 | 24 |
epithelial tube | 2.93e-10 | 117 |
blood vessel layer | 2.51e-08 | 7 |
circulatory system | 3.33e-08 | 112 |
chorion | 1.98e-07 | 7 |
sympathetic nervous system | 4.43e-07 | 5 |
autonomic nervous system | 4.43e-07 | 5 |
intestine | 5.31e-07 | 17 |
epithelial tube open at both ends | 5.83e-07 | 59 |
blood vessel | 5.83e-07 | 59 |
blood vasculature | 5.83e-07 | 59 |
vascular cord | 5.83e-07 | 59 |
large intestine | 6.64e-07 | 11 |
mesoderm | 9.40e-07 | 315 |
mesoderm-derived structure | 9.40e-07 | 315 |
presumptive mesoderm | 9.40e-07 | 315 |