FFCP PHASE1:Hg19::chr3:174581572..174581585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254827 | |EntrezGene=254827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23219 | |HGNC=23219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000473253_5end | |association_with_transcript=-20bp_to_ENST00000473253_5end | ||
|cluster_id=chr3:174581572..174581585,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_6_at_NAALADL2_5end | |description=CAGE_peak_6_at_NAALADL2_5end | ||
|id=chr3:174581572..174581585,+ | |id=chr3:174581572..174581585,+ | ||
|ontology_enrichment_celltype=CL:0002537!2.55e-12!5;CL:0002541!2.24e-09!3 | |ontology_enrichment_celltype=CL:0002537!2.55e-12!5;CL:0002541!2.24e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.76e-45;5!CL:0000349;2.32e-21;19!CL:0002541;1.47e-09;3!CL:0002327;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.20e-45,5;CL:0000349,2.09e-21,19;CL:0002541,1.41e-09,3;CL:0002327,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.72e-26;1!UBERON:0008425;6.72e-26;1 | |||
|ontology_enrichment_disease=DOID:0050615!2.60e-09!16;DOID:178!1.10e-07!1;DOID:326!1.10e-07!1;DOID:3978!1.10e-07!1;DOID:3394!1.10e-07!1;DOID:5844!1.10e-07!1;DOID:5093!2.28e-07!4;DOID:1612!2.28e-07!4;DOID:1799!2.50e-07!1;DOID:10165!2.50e-07!1;DOID:1798!2.50e-07!1;DOID:0050619!3.84e-07!1;DOID:1357!3.84e-07!1 | |ontology_enrichment_disease=DOID:0050615!2.60e-09!16;DOID:178!1.10e-07!1;DOID:326!1.10e-07!1;DOID:3978!1.10e-07!1;DOID:3394!1.10e-07!1;DOID:5844!1.10e-07!1;DOID:5093!2.28e-07!4;DOID:1612!2.28e-07!4;DOID:1799!2.50e-07!1;DOID:10165!2.50e-07!1;DOID:1798!2.50e-07!1;DOID:0050619!3.84e-07!1;DOID:1357!3.84e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.05e-25;4!DOID:1612;1.05e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.26e-25,4;DOID:1612,1.26e-25,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.19e-16!14;UBERON:0000158!5.19e-16!14;UBERON:0003127!2.81e-13!2;UBERON:0000341!4.60e-13!2;UBERON:0000476!2.24e-09!3;UBERON:0000920!2.24e-09!3;UBERON:0000478!4.30e-09!24;UBERON:0000305!6.29e-09!7;UBERON:0003124!1.04e-08!7;UBERON:0000915!3.49e-08!52;UBERON:0004871!7.30e-08!8;UBERON:0006122!1.33e-07!1;UBERON:0007029!1.83e-07!1;UBERON:0001301!3.20e-07!1;UBERON:0001764!3.84e-07!1;UBERON:0001825!3.84e-07!1;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1 | |ontology_enrichment_uberon=UBERON:0005631!5.19e-16!14;UBERON:0000158!5.19e-16!14;UBERON:0003127!2.81e-13!2;UBERON:0000341!4.60e-13!2;UBERON:0000476!2.24e-09!3;UBERON:0000920!2.24e-09!3;UBERON:0000478!4.30e-09!24;UBERON:0000305!6.29e-09!7;UBERON:0003124!1.04e-08!7;UBERON:0000915!3.49e-08!52;UBERON:0004871!7.30e-08!8;UBERON:0006122!1.33e-07!1;UBERON:0007029!1.83e-07!1;UBERON:0001301!3.20e-07!1;UBERON:0001764!3.84e-07!1;UBERON:0001825!3.84e-07!1;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.25e-40;10!UBERON:0000158;5.25e-40;10!UBERON:0000305;1.28e-32;7!UBERON:0000478;4.82e-26;24!UBERON:0000310;6.44e-11;10!UBERON:0001443;5.17e-10;11!UBERON:0003124;1.47e-09;3!UBERON:0000920;1.47e-09;3!UBERON:0001987;1.75e-07;4!UBERON:0001911;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.34e-44,14;UBERON:0000158,2.34e-44,14;UBERON:0000305,1.09e-32,7;UBERON:0004871,1.02e-28,8;UBERON:0000478,4.46e-26,24;UBERON:0003124,4.37e-15,7;UBERON:0000310,6.94e-11,10;UBERON:0001443,5.54e-10,11;UBERON:0004923,1.13e-09,66;UBERON:0000920,1.41e-09,3;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4;UBERON:0001911,1.92e-07,4;UBERON:0005333,1.92e-07,4;UBERON:0008425,1.92e-07,4;UBERON:0005311,1.92e-07,4 | |||
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|short_description=p6@NAALADL2 | |short_description=p6@NAALADL2 | ||
}} | }} |
Latest revision as of 19:16, 16 September 2015
Short description: | p6@NAALADL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NAALADL2_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -20bp_to_ENST00000473253_5end |
EntrezGene: | NAALADL2 |
HGNC: | 23219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.20e-45 | 5 |
extraembryonic cell | 2.09e-21 | 19 |
chorionic membrane mesenchymal stem cell | 1.41e-09 | 3 |
mammary gland epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.34e-44 | 14 |
membranous layer | 2.34e-44 | 14 |
amnion | 1.09e-32 | 7 |
somatic layer of lateral plate mesoderm | 1.02e-28 | 8 |
extraembryonic structure | 4.46e-26 | 24 |
chorion | 4.37e-15 | 7 |
breast | 6.94e-11 | 10 |
chest | 5.54e-10 | 11 |
organ component layer | 1.13e-09 | 66 |
egg chorion | 1.41e-09 | 3 |
placenta | 1.80e-07 | 4 |
allantois | 1.80e-07 | 4 |
mammary gland | 1.92e-07 | 4 |
mammary bud | 1.92e-07 | 4 |
mammary ridge | 1.92e-07 | 4 |
mammary placode | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.26e-25 | 4 |
breast cancer | 1.26e-25 | 4 |