FFCP PHASE1:Hg19::chr12:120241296..120241310,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:120241296..120241310,- to FFCP PHASE1:Hg19::chr12:120241296..120241310,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11113 | |EntrezGene=11113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1985 | |HGNC=1985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000488203_5end | |||
|cluster_id=chr12:120241296..120241310,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CIT_5end | |||
|id=chr12:120241296..120241310,- | |||
|ontology_enrichment_celltype=CL:0002620!3.60e-09!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-18;82!UBERON:0006215;3.63e-07;3!UBERON:0006241;7.44e-07;3!UBERON:0003057;7.44e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.54e-49!57;UBERON:0005068!1.54e-49!57;UBERON:0006241!1.54e-49!57;UBERON:0007135!1.54e-49!57;UBERON:0001017!1.32e-43!82;UBERON:0005743!4.25e-42!86;UBERON:0007023!2.35e-41!115;UBERON:0002616!9.92e-41!59;UBERON:0000073!4.92e-40!94;UBERON:0001016!4.92e-40!94;UBERON:0003075!8.06e-39!86;UBERON:0007284!8.06e-39!86;UBERON:0002780!1.53e-38!41;UBERON:0001890!1.53e-38!41;UBERON:0006240!1.53e-38!41;UBERON:0003080!3.03e-37!42;UBERON:0000955!2.27e-36!69;UBERON:0006238!2.27e-36!69;UBERON:0002346!5.26e-36!90;UBERON:0001893!3.44e-31!34;UBERON:0002020!3.55e-31!34;UBERON:0003528!3.55e-31!34;UBERON:0002791!4.40e-30!33;UBERON:0000153!2.82e-29!129;UBERON:0007811!2.82e-29!129;UBERON:0001869!3.01e-29!32;UBERON:0003056!1.80e-28!61;UBERON:0000033!3.89e-28!123;UBERON:0004121!3.41e-26!169;UBERON:0000924!6.47e-25!173;UBERON:0006601!6.47e-25!173;UBERON:0002619!4.38e-24!22;UBERON:0001950!5.53e-22!20;UBERON:0000956!8.97e-22!25;UBERON:0000203!8.97e-22!25;UBERON:0000475!4.98e-19!365;UBERON:0000481!6.96e-15!347;UBERON:0003076!5.07e-13!15;UBERON:0003057!5.07e-13!15;UBERON:0000468!1.08e-11!659;UBERON:0000062!1.10e-11!511;UBERON:0000467!1.13e-11!625;UBERON:0000480!1.43e-11!626;UBERON:0000064!3.86e-11!219;UBERON:0004732!4.62e-11!13;UBERON:0002420!5.16e-11!9;UBERON:0007245!5.16e-11!9;UBERON:0010009!5.16e-11!9;UBERON:0010011!5.16e-11!9;UBERON:0000454!5.16e-11!9;UBERON:0002308!6.56e-11!9;UBERON:0000125!6.56e-11!9;UBERON:0004733!3.88e-10!12;UBERON:0002028!3.88e-10!12;UBERON:0007277!3.88e-10!12;UBERON:0000477!6.70e-10!286;UBERON:0000483!3.05e-09!309;UBERON:0000119!6.64e-09!312;UBERON:0009663!6.99e-09!7;UBERON:0001894!1.02e-08!7;UBERON:0006222!1.02e-08!7;UBERON:0000200!1.89e-08!6;UBERON:0000922!2.51e-08!612;UBERON:0000025!3.15e-08!194;UBERON:0002050!9.10e-08!605;UBERON:0005423!9.10e-08!605;UBERON:0004111!9.23e-08!241;UBERON:0001871!1.01e-07!7;UBERON:0000923!1.96e-07!604;UBERON:0005291!1.96e-07!604;UBERON:0006598!1.96e-07!604;UBERON:0002532!1.96e-07!604;UBERON:0002680!2.53e-07!9;UBERON:0001895!2.53e-07!9;UBERON:0010092!2.53e-07!9;UBERON:0000479!2.59e-07!787;UBERON:0002021!3.79e-07!5;UBERON:0001872!4.02e-07!5;UBERON:0002298!4.17e-07!8;UBERON:0000349!6.66e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.94e-47;41!UBERON:0001890;4.94e-47;41!UBERON:0001893;4.28e-45;34!UBERON:0003528;1.27e-44;34!UBERON:0002020;1.27e-44;34!UBERON:0001869;3.56e-44;32!UBERON:0000073;4.92e-44;53!UBERON:0002616;4.92e-44;53!UBERON:0002791;5.85e-44;32!UBERON:0002619;4.54e-42;22!UBERON:0001950;2.52e-38;20!UBERON:0000956;2.35e-36;25!UBERON:0000203;2.35e-36;25!UBERON:0000955;1.36e-29;68!UBERON:0001017;1.36e-28;75!UBERON:0001016;1.52e-24;83!UBERON:0002420;2.41e-18;9!UBERON:0007245;2.41e-18;9!UBERON:0010009;2.41e-18;9!UBERON:0010011;2.41e-18;9!UBERON:0000454;2.41e-18;9!UBERON:0000125;3.61e-18;9!UBERON:0002308;3.61e-18;9!UBERON:0009663;1.44e-14;7!UBERON:0001894;3.09e-14;7!UBERON:0004732;3.72e-14;13!UBERON:0011216;4.84e-14;132!UBERON:0000200;9.21e-14;6!UBERON:0007023;3.60e-13;114!UBERON:0004733;1.37e-12;12!UBERON:0002028;1.37e-12;12!UBERON:0002298;5.41e-12;6!UBERON:0002021;1.81e-11;5!UBERON:0001872;1.91e-11;5!UBERON:0000349;4.93e-11;5!UBERON:0001871;6.63e-11;6!UBERON:0000369;2.28e-09;4!UBERON:0002435;2.28e-09;4!UBERON:0000204;2.28e-09;4!UBERON:0002784;4.59e-09;4!UBERON:0003296;8.51e-09;4!UBERON:0010133;8.51e-09;4!UBERON:0010314;2.96e-08;132!UBERON:0002680;5.53e-08;9!UBERON:0001895;5.53e-08;9!UBERON:0001870;1.00e-07;3!UBERON:0005383;1.85e-07;3!UBERON:0005382;1.85e-07;3!UBERON:0000988;6.28e-07;3!UBERON:0002240;7.44e-07;3!UBERON:0005174;7.44e-07;3!UBERON:0001137;7.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.54e-83,56;UBERON:0005068,3.54e-83,56;UBERON:0006241,3.54e-83,56;UBERON:0007135,3.54e-83,56;UBERON:0000073,1.32e-77,53;UBERON:0002616,1.32e-77,53;UBERON:0001017,5.31e-67,81;UBERON:0002780,3.53e-66,41;UBERON:0001890,3.53e-66,41;UBERON:0003080,3.53e-66,41;UBERON:0006240,3.53e-66,41;UBERON:0000955,8.61e-65,68;UBERON:0006238,8.61e-65,68;UBERON:0003075,1.07e-63,82;UBERON:0007284,1.07e-63,82;UBERON:0001016,2.65e-63,89;UBERON:0002346,5.69e-60,86;UBERON:0001893,4.44e-53,34;UBERON:0003528,4.69e-53,34;UBERON:0002020,4.69e-53,34;UBERON:0001869,1.28e-49,32;UBERON:0002791,2.36e-49,32;UBERON:0010371,1.33e-48,104;UBERON:0003056,9.81e-48,61;UBERON:0002619,4.74e-42,22;UBERON:0007023,5.33e-42,114;UBERON:0010314,4.23e-41,132;UBERON:0001950,2.65e-38,20;UBERON:0004121,2.70e-37,171;UBERON:0000924,2.70e-37,171;UBERON:0006601,2.70e-37,171;UBERON:0000956,2.43e-36,25;UBERON:0000203,2.43e-36,25;UBERON:0011216,8.18e-30,223;UBERON:0002420,2.63e-18,9;UBERON:0007245,2.63e-18,9;UBERON:0010009,2.63e-18,9;UBERON:0010011,2.63e-18,9;UBERON:0000454,2.63e-18,9;UBERON:0000125,4.01e-18,9;UBERON:0002308,4.01e-18,9;UBERON:0003076,1.59e-17,15;UBERON:0003057,1.59e-17,15;UBERON:0000025,3.21e-16,192;UBERON:0009663,1.57e-14,7;UBERON:0001894,3.04e-14,7;UBERON:0006222,3.04e-14,7;UBERON:0004732,3.45e-14,13;UBERON:0000200,9.15e-14,6;UBERON:0004111,1.14e-12,240;UBERON:0004733,1.26e-12,12;UBERON:0002028,1.26e-12,12;UBERON:0007277,1.26e-12,12;UBERON:0002298,4.87e-12,6;UBERON:0002021,1.81e-11,5;UBERON:0001872,2.01e-11,5;UBERON:0000349,4.90e-11,5;UBERON:0001871,6.59e-11,6;UBERON:0000483,6.71e-10,306;UBERON:0000119,1.18e-09,309;UBERON:0000369,2.28e-09,4;UBERON:0002435,2.28e-09,4;UBERON:0000204,2.28e-09,4;UBERON:0010082,2.28e-09,4;UBERON:0002784,4.60e-09,4;UBERON:0003296,8.28e-09,4;UBERON:0010133,8.28e-09,4;UBERON:0002680,5.54e-08,9;UBERON:0001895,5.54e-08,9;UBERON:0010092,5.54e-08,9;UBERON:0001870,1.00e-07,3;UBERON:0005383,1.85e-07,3;UBERON:0005382,1.85e-07,3;UBERON:0000988,6.35e-07,3;UBERON:0002240,7.61e-07,3;UBERON:0005174,7.61e-07,3;UBERON:0001137,7.61e-07,3;UBERON:0000922,7.71e-07,592;UBERON:0001896,9.28e-07,3;UBERON:0005290,9.28e-07,3;UBERON:0010096,9.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.990130823680373,1.32558950291166,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.0843174571537,0.50133791063589,0.579386075843295,0,0,1.03988298880475,0,0.087834785693126,6.67993285038334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0.624320153660641,0,1.94283284717341,0.117434498643765,0.323745888736263,0.140450806702248,1.22492502752936,0.491337269247072,1.03325781175765,3.56400857184616,0.989067717114227,0,0,0,0.250237039743928,0.277064115484183,1.75591048352335,0,1.35214253015937,0,0.358779271377724,0.640672166455702,0,0.300091096084402,0.92747276314595,0.257640540045629,0.744467425326359,0.675105328965065,0.194874010322397,0.252433774244115,1.01254888506529,3.23292113637624,0.710019185033229,0.503760491138201,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0.76228387266739,1.30139853857622,1.54657762555539,0.670065061337395,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,4.34418072340414,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,1.23190734020714,0,0.464841513839837,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.48335359146061,0,0,0,0.644521469209642,0.435050081742686,0.0852266274161009,0.356128142586949,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,1.31178950409327,0,0,0.281695602532241,0.143411352204052,0,0,0,1.05553817648832,2.96365403663912,0.75894634753143,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,29.8244294329889,48.6716180780374,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,33.9266461133326,40.3541227004053,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,49.601517605575,44.8618751686518,30.5163472634166,42.0201187738654,15.3684761855845,30.2751848072482,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.884575645033392,9.77648231893801,0,0,0,9.77316428219817,0.802577647298789,28.1117334870407,0,0,0,0,0,2.75465485467441,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.678923115418936,6.08967274171352,1.35588444468319,0,0,46.2801918437473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2155506822622,19.851279939339,0,0,0,1.39641200636127,0.916641696046735,0,0.199679000498991,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,28.6282688331349,35.6852924012328,0.482259445395058,0.412618309791701,0,0,0,45.6229170501765,0,1.49730843868477,3.67182116944987,0,0,0,0,0,0,1.08599920350743,0,1.30634944043764,0,0,0,0,0,0,30.1229288322413,18.5125642439766,0,0,0,0.943225830597996,0,0.496166021811951,0,0,0,0,0,0,0,0,63.796908957623,50.0307686098049,96.2718257132984,7.45431954397093,7.87596265911651,12.0467021706284,0,0,0,0,0,0,0,0.149254802886874,0,0,1.89403005275089,0.754703705257725,3.55924488638614,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,101.758209007674,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,1.07824811396682,0,0,0,0,0,0,0.636008701306837,0,0,2.1160556621441,0,41.235162511927,90.6858088483744,114.138209225863,74.6623565836348,4.53729053199093,58.6453500896568,68.4656737479049,7.13847101295772,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,43.1565165711542,65.6105602835632,113.677738075651,51.8107169284219,7.11067251723685,0,0.496211178389294,0,0,14.4639495687137,61.8762048882636,7.28358725083958,10.9277851848623,0,0,0,7.27276142852099,51.8947183410879,0,0,0.313972371402056,38.8075507092525,0,4.56579360254748,0,0,3.71678029718613,0,1.51113852978563,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,1.45713297917742,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,22.7717821853337,7.12911360785006,16.906229103336,0,0,0.322289439867886,0,0,0,0,5.11235471772562,0,7.02363957442111,0,42.4266898791308,3.49080552272302,2.645134202577,2.97596014533401,3.23522940041993,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,0.151557396436479,0,29.8500998205161,29.6852698123639,0.639701945702943,1.42838658878244,0.0645889098360061,0.12414942859171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| ||
|short_description=p2@CIT | |||
}} | }} |
Latest revision as of 19:00, 16 September 2015
Short description: | p2@CIT |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CIT_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -6bp_to_ENST00000488203_5end |
EntrezGene: | CIT |
HGNC: | 1985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data