FFCP PHASE1:Hg19::chr14:95027755..95027770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5104,5267 | |EntrezGene=5104,5267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8723,8948 | |HGNC=8723,8948 | ||
|TSSclassifier=strong | |||
|UniProt=G3V264 | |UniProt=G3V264 | ||
|association_with_transcript=-8bp_to_ENST00000553780,ENST00000554220,ENST00000555095,uc010avd.2_5end | |association_with_transcript=-8bp_to_ENST00000553780,ENST00000554220,ENST00000555095,uc010avd.2_5end | ||
|cluster_id=chr14:95027755..95027770,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_SERPINA4_5end,CAGE_peak_4_at_SERPINA5_5end | |description=CAGE_peak_2_at_SERPINA4_5end,CAGE_peak_4_at_SERPINA5_5end | ||
|id=chr14:95027755..95027770,+ | |id=chr14:95027755..95027770,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.19e-22!12;CL:0000417!1.19e-22!12;CL:0000668!1.19e-22!12;CL:0000414!1.19e-22!12;CL:0000412!1.19e-22!12;CL:0000182!1.19e-22!12;CL:0000223!8.46e-10!59 | |ontology_enrichment_celltype=CL:0000181!1.19e-22!12;CL:0000417!1.19e-22!12;CL:0000668!1.19e-22!12;CL:0000414!1.19e-22!12;CL:0000412!1.19e-22!12;CL:0000182!1.19e-22!12;CL:0000223!8.46e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.84e-34;12!CL:0002563;1.41e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.05e-34,12;CL:0000223,3.29e-14,58;CL:0002563,1.30e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.22e-38;11!UBERON:0009497;6.97e-32;13!UBERON:0003104;1.73e-23;31!UBERON:0007297;2.28e-14;2!UBERON:0001041;4.21e-10;30!CL:0000223;2.83e-09;58!UBERON:0006242;2.61e-08;1!UBERON:0005754;4.71e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;8.36e-34;19!UBERON:0006925;8.36e-34;19!UBERON:0002423;9.59e-31;25!UBERON:0006947;2.23e-20;3!UBERON:0004054;2.23e-20;3!UBERON:0002365;1.33e-19;31!UBERON:0002330;1.33e-19;31!UBERON:0002368;4.88e-17;33!UBERON:0005904;1.96e-15;4!UBERON:0000949;1.38e-12;43!UBERON:0005172;3.74e-12;52!UBERON:0005173;3.74e-12;52!UBERON:0005409;4.75e-10;22!UBERON:0002417;1.05e-09;58!UBERON:0000916;1.05e-09;58!UBERON:0002530;9.43e-09;57!UBERON:0001007;1.39e-08;81!UBERON:0000998;4.71e-08;1!UBERON:0006868;4.71e-08;1!UBERON:0001301;5.22e-08;1!UBERON:0001000;9.61e-08;1!UBERON:0005352;9.61e-08;1!UBERON:0001242;1.41e-07;4!UBERON:0001262;1.41e-07;4!UBERON:0004786;1.41e-07;4!UBERON:0004808;1.41e-07;4!UBERON:0001277;1.41e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.13e-34,19;UBERON:0006925,9.13e-34,19;UBERON:0008836,9.13e-34,19;UBERON:0009497,1.02e-30,25;UBERON:0000015,1.02e-30,25;UBERON:0002423,1.02e-30,25;UBERON:0006235,1.02e-30,25;UBERON:0004161,1.02e-30,25;UBERON:0008835,6.18e-29,22;UBERON:0003894,6.18e-29,22;UBERON:0009854,1.32e-27,23;UBERON:0007499,2.91e-25,25;UBERON:0005172,6.38e-25,54;UBERON:0005173,6.38e-25,54;UBERON:0009856,3.16e-24,26;UBERON:0002417,3.91e-22,60;UBERON:0000916,3.91e-22,60;UBERON:0003929,1.31e-21,54;UBERON:0006947,1.71e-20,3;UBERON:0004054,1.71e-20,3;UBERON:0002365,4.79e-20,31;UBERON:0002330,4.79e-20,31;UBERON:0002368,1.46e-17,35;UBERON:0000949,3.49e-16,45;UBERON:0005904,1.60e-15,4;UBERON:0002530,4.11e-14,59;UBERON:0005177,8.11e-14,101;UBERON:0005911,2.66e-13,82;UBERON:0004921,6.73e-13,118;UBERON:0001007,2.52e-11,145;UBERON:0001555,2.52e-11,145;UBERON:0007026,2.52e-11,145;UBERON:0009569,1.71e-10,112;UBERON:0004119,6.14e-10,160;UBERON:0000925,6.14e-10,160;UBERON:0006595,6.14e-10,160;UBERON:0005256,2.20e-09,122;UBERON:0001041,6.49e-09,87;UBERON:0005409,7.63e-09,25;UBERON:0003104,1.18e-08,160;UBERON:0009142,1.18e-08,160;UBERON:0000998,4.71e-08,1;UBERON:0006868,4.71e-08,1;UBERON:0001301,5.05e-08,1;UBERON:0001000,7.59e-08,1;UBERON:0005352,7.59e-08,1;UBERON:0001242,1.30e-07,4;UBERON:0001262,1.30e-07,4;UBERON:0004786,1.30e-07,4;UBERON:0004808,1.30e-07,4;UBERON:0001277,1.30e-07,4;UBERON:0003914,3.11e-07,117;UBERON:0000080,3.81e-07,9;UBERON:0002120,3.81e-07,9;UBERON:0004875,3.81e-07,9;UBERON:0005721,3.81e-07,9;UBERON:0005754,3.81e-07,9;UBERON:0007297,3.81e-07,9 | |||
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|short_description=p2@SERPINA4,p4@SERPINA5 | |short_description=p2@SERPINA4,p4@SERPINA5 | ||
}} | }} |
Latest revision as of 18:35, 16 September 2015
Short description: | p2@SERPINA4, p4@SERPINA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SERPINA4_5end, CAGE_peak_4_at_SERPINA5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -8bp_to_ENST00000553780, ENST00000554220, ENST00000555095, uc010avd.2_5end |
EntrezGene: | 5104,5267 |
HGNC: | 8948&submit=Submit 8723, 8948 |
UniProt: | G3V264 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.05e-34 | 12 |
endodermal cell | 3.29e-14 | 58 |
intestinal epithelial cell | 1.30e-07 | 4 |