FFCP PHASE1:Hg19::chr5:161275267..161275278,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |||
|TSSclassifier=strong | |||
|UniProt=P14867 | |||
|association_with_transcript=-171bp_to_ENST00000437025_5end | |||
|cluster_id=chr5:161275267..161275278,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_GABRA1_5end | |||
|id=chr5:161275267..161275278,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.49e-18;82!UBERON:0006215;1.28e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.85e-105!57;UBERON:0005068!2.85e-105!57;UBERON:0006241!2.85e-105!57;UBERON:0007135!2.85e-105!57;UBERON:0002616!9.21e-97!59;UBERON:0002780!2.24e-92!41;UBERON:0001890!2.24e-92!41;UBERON:0006240!2.24e-92!41;UBERON:0003080!5.17e-90!42;UBERON:0000955!1.28e-88!69;UBERON:0006238!1.28e-88!69;UBERON:0001017!1.19e-87!82;UBERON:0005743!9.18e-87!86;UBERON:0001893!5.46e-82!34;UBERON:0002020!6.71e-82!34;UBERON:0003528!6.71e-82!34;UBERON:0001869!1.05e-81!32;UBERON:0000073!6.45e-81!94;UBERON:0001016!6.45e-81!94;UBERON:0002791!1.55e-78!33;UBERON:0003075!1.02e-76!86;UBERON:0007284!1.02e-76!86;UBERON:0002346!7.45e-73!90;UBERON:0002619!8.49e-69!22;UBERON:0003056!3.51e-63!61;UBERON:0001950!1.02e-62!20;UBERON:0000956!3.73e-60!25;UBERON:0000203!3.73e-60!25;UBERON:0007023!2.34e-58!115;UBERON:0000153!4.64e-52!129;UBERON:0007811!4.64e-52!129;UBERON:0000033!2.22e-50!123;UBERON:0004121!1.48e-40!169;UBERON:0000924!2.27e-39!173;UBERON:0006601!2.27e-39!173;UBERON:0000025!4.47e-25!194;UBERON:0002420!1.26e-22!9;UBERON:0007245!1.26e-22!9;UBERON:0010009!1.26e-22!9;UBERON:0010011!1.26e-22!9;UBERON:0000454!1.26e-22!9;UBERON:0002308!1.46e-22!9;UBERON:0000125!1.46e-22!9;UBERON:0000200!1.13e-21!6;UBERON:0001871!1.45e-20!7;UBERON:0004111!4.18e-18!241;UBERON:0001872!1.02e-17!5;UBERON:0002021!1.17e-17!5;UBERON:0004733!3.08e-17!12;UBERON:0002028!3.08e-17!12;UBERON:0007277!3.08e-17!12;UBERON:0000483!3.98e-17!309;UBERON:0000349!5.39e-17!5;UBERON:0003076!6.99e-17!15;UBERON:0003057!6.99e-17!15;UBERON:0000119!7.51e-17!312;UBERON:0009663!1.49e-16!7;UBERON:0000477!2.22e-16!286;UBERON:0000064!3.27e-16!219;UBERON:0004732!8.41e-16!13;UBERON:0002680!1.20e-13!9;UBERON:0001895!1.20e-13!9;UBERON:0010092!1.20e-13!9;UBERON:0000369!1.21e-13!4;UBERON:0002435!1.21e-13!4;UBERON:0000204!1.21e-13!4;UBERON:0010082!1.21e-13!4;UBERON:0000475!1.31e-13!365;UBERON:0001894!8.53e-12!7;UBERON:0006222!8.53e-12!7;UBERON:0002771!1.77e-11!3;UBERON:0000988!8.53e-11!3;UBERON:0005383!1.66e-10!3;UBERON:0005382!1.66e-10!3;UBERON:0002298!3.15e-10!8;UBERON:0000481!3.18e-09!347;UBERON:0001870!1.36e-08!2;UBERON:0000062!4.31e-08!511;UBERON:0001876!6.42e-08!2;UBERON:0002148!7.61e-08!2;UBERON:0009662!7.61e-08!2;UBERON:0001905!1.07e-07!2;UBERON:0002757!1.07e-07!2;UBERON:0010134!1.07e-07!2;UBERON:0002784!1.07e-07!2;UBERON:0005408!1.07e-07!2;UBERON:0001899!1.07e-07!2;UBERON:0001954!1.27e-07!2;UBERON:0003022!1.27e-07!2;UBERON:0002421!1.27e-07!2;UBERON:0002600!1.27e-07!2;UBERON:0002360!1.65e-07!2;UBERON:0000094!1.65e-07!2;UBERON:0007645!1.65e-07!2;UBERON:0001875!1.77e-07!2;UBERON:0006514!1.77e-07!2;UBERON:0001873!1.83e-07!2;UBERON:0010122!1.83e-07!2;UBERON:0001897!2.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.00e-84;22!UBERON:0001869;3.30e-80;32!UBERON:0003528;3.69e-79;34!UBERON:0002020;3.69e-79;34!UBERON:0001950;9.76e-76;20!UBERON:0000956;2.01e-74;25!UBERON:0000203;2.01e-74;25!UBERON:0002791;3.91e-74;32!UBERON:0001893;3.40e-71;34!UBERON:0002780;2.12e-64;41!UBERON:0001890;2.12e-64;41!UBERON:0000073;1.35e-58;53!UBERON:0002616;1.35e-58;53!UBERON:0000955;4.40e-44;68!UBERON:0001017;1.66e-35;75!UBERON:0000200;2.55e-31;6!UBERON:0001016;7.26e-27;83!UBERON:0002021;2.30e-25;5!UBERON:0000349;1.85e-24;5!UBERON:0002680;7.95e-20;9!UBERON:0001895;7.95e-20;9!UBERON:0004733;1.17e-19;12!UBERON:0002028;1.17e-19;12!UBERON:0002420;5.09e-19;9!UBERON:0007245;5.09e-19;9!UBERON:0010009;5.09e-19;9!UBERON:0010011;5.09e-19;9!UBERON:0000454;5.09e-19;9!UBERON:0000125;5.89e-19;9!UBERON:0002308;5.89e-19;9!UBERON:0001871;4.31e-18;6!UBERON:0004732;4.45e-18;13!UBERON:0007023;2.09e-17;114!UBERON:0001872;3.96e-17;5!UBERON:0001870;9.83e-17;3!UBERON:0000988;3.57e-15;3!UBERON:0002298;4.67e-13;6!UBERON:0011216;8.37e-12;132!UBERON:0002702;1.12e-11;2!UBERON:0000369;1.69e-11;4!UBERON:0002435;1.69e-11;4!UBERON:0000204;1.69e-11;4!UBERON:0001894;1.77e-11;7!UBERON:0002784;1.99e-11;4!UBERON:0002771;2.09e-11;2!UBERON:0009663;2.87e-11;7!UBERON:0001876;5.97e-11;2!UBERON:0002148;7.50e-11;2!UBERON:0006331;7.50e-11;2!UBERON:0009662;7.50e-11;2!UBERON:0001905;1.30e-10;2!UBERON:0001954;1.30e-10;2!UBERON:0002757;1.30e-10;2!UBERON:0010134;1.30e-10;2!UBERON:0003022;1.30e-10;2!UBERON:0005408;1.30e-10;2!UBERON:0002421;1.30e-10;2!UBERON:0001899;1.30e-10;2!UBERON:0002600;1.30e-10;2!UBERON:0010314;1.04e-08;132!UBERON:0002037;1.54e-08;6!UBERON:0005383;2.81e-07;3!UBERON:0005382;2.81e-07;3!UBERON:0004121;7.48e-07;165!UBERON:0007190;8.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-114,53;UBERON:0002616,1.48e-114,53;UBERON:0001049,3.59e-108,56;UBERON:0005068,3.59e-108,56;UBERON:0006241,3.59e-108,56;UBERON:0007135,3.59e-108,56;UBERON:0000955,1.72e-97,68;UBERON:0006238,1.72e-97,68;UBERON:0002780,2.64e-95,41;UBERON:0001890,2.64e-95,41;UBERON:0003080,2.64e-95,41;UBERON:0006240,2.64e-95,41;UBERON:0003528,4.27e-92,34;UBERON:0002020,4.27e-92,34;UBERON:0001869,6.65e-91,32;UBERON:0001017,8.77e-86,81;UBERON:0001893,2.15e-85,34;UBERON:0002619,1.12e-84,22;UBERON:0002791,2.89e-83,32;UBERON:0001016,1.02e-76,89;UBERON:0001950,9.15e-76,20;UBERON:0000956,2.22e-74,25;UBERON:0000203,2.22e-74,25;UBERON:0003075,3.68e-72,82;UBERON:0007284,3.68e-72,82;UBERON:0002346,1.58e-68,86;UBERON:0003056,1.42e-62,61;UBERON:0007023,2.90e-57,114;UBERON:0010371,1.33e-55,104;UBERON:0010314,3.58e-45,132;UBERON:0004121,2.97e-37,171;UBERON:0000924,2.97e-37,171;UBERON:0006601,2.97e-37,171;UBERON:0000200,2.55e-31,6;UBERON:0011216,1.20e-28,223;UBERON:0000025,4.57e-27,192;UBERON:0002021,2.30e-25,5;UBERON:0000349,2.21e-24,5;UBERON:0004111,2.91e-20,240;UBERON:0002680,7.08e-20,9;UBERON:0001895,7.08e-20,9;UBERON:0010092,7.08e-20,9;UBERON:0004733,1.11e-19,12;UBERON:0002028,1.11e-19,12;UBERON:0007277,1.11e-19,12;UBERON:0002420,4.62e-19,9;UBERON:0007245,4.62e-19,9;UBERON:0010009,4.62e-19,9;UBERON:0010011,4.62e-19,9;UBERON:0000454,4.62e-19,9;UBERON:0000125,5.43e-19,9;UBERON:0002308,5.43e-19,9;UBERON:0001871,4.08e-18,6;UBERON:0004732,4.23e-18,13;UBERON:0001872,3.96e-17,5;UBERON:0001870,8.85e-17,3;UBERON:0003076,1.44e-15,15;UBERON:0003057,1.44e-15,15;UBERON:0000988,3.31e-15,3;UBERON:0000483,2.31e-14,306;UBERON:0000119,3.73e-14,309;UBERON:0002298,4.67e-13,6;UBERON:0002702,1.06e-11,2;UBERON:0000369,1.54e-11,4;UBERON:0002435,1.54e-11,4;UBERON:0000204,1.54e-11,4;UBERON:0010082,1.54e-11,4;UBERON:0001894,1.72e-11,7;UBERON:0006222,1.72e-11,7;UBERON:0002784,1.85e-11,4;UBERON:0002771,2.20e-11,2;UBERON:0009663,2.68e-11,7;UBERON:0001876,5.83e-11,2;UBERON:0002148,7.50e-11,2;UBERON:0006331,7.50e-11,2;UBERON:0009662,7.50e-11,2;UBERON:0001905,1.24e-10,2;UBERON:0002757,1.24e-10,2;UBERON:0010134,1.24e-10,2;UBERON:0005408,1.24e-10,2;UBERON:0001899,1.24e-10,2;UBERON:0001954,1.58e-10,2;UBERON:0003022,1.58e-10,2;UBERON:0002421,1.58e-10,2;UBERON:0002600,1.58e-10,2;UBERON:0002037,1.47e-08,6;UBERON:0006215,1.47e-08,6;UBERON:0005383,2.59e-07,3;UBERON:0005382,2.59e-07,3;UBERON:0000923,4.89e-07,560;UBERON:0010316,4.89e-07,560;UBERON:0005291,4.89e-07,560;UBERON:0006598,4.89e-07,560;UBERON:0010317,4.89e-07,560;UBERON:0002532,4.89e-07,560;UBERON:0002050,6.22e-07,564;UBERON:0007190,8.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,3.37606599385231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75466196876175,8.07082454008106,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.5677537021303,24.4130778107333,9.50981635408532,8.27533333069933,6.58156191461918,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0.802577647298789,9.13631338328823,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,12.8520915790434,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.17925449778521,0,0,0,0,0,9.05168394204568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,3.04134984008187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0631590594388,12.2026264901963,8.76336514945499,0,0.887432412294818,1.24192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80685431837269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,6.93675631041763,12.7526918693026,3.67157875831448,7.58930547690793,1.51243017733031,11.410946656596,7.42787969906515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3049041698237,9.37293718336617,8.26747186004736,10.7806877329642,0.546974809018219,0,0,0,0,2.67850917939143,2.35398605553177,0,0,0,0,0,1.69924332442079,9.27396107236172,0,0,0,2.67096502857203,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83889372481891,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,2.48750831837634,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@GABRA1 | |||
}} |
Latest revision as of 17:22, 16 September 2015
Short description: | p6@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -171bp_to_ENST00000437025_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data