FFCP PHASE1:Hg19::chr1:13840276..13840295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126755 | |EntrezGene=126755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27005 | |HGNC=27005 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT99 | |UniProt=Q5VT99 | ||
|association_with_transcript=-34bp_to_NM_001010847,uc001avb.2_5end | |association_with_transcript=-34bp_to_NM_001010847,uc001avb.2_5end | ||
|cluster_id=chr1:13840276..13840295,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_5_at_LRRC38_5end | |description=CAGE_peak_5_at_LRRC38_5end | ||
|id=chr1:13840276..13840295,- | |id=chr1:13840276..13840295,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;9.81e-07;2!CL:0000242;9.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;1.66e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.57e-12,1 | |||
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|short_description=p5@LRRC38 | |short_description=p5@LRRC38 | ||
}} | }} |
Latest revision as of 15:39, 16 September 2015
Short description: | p5@LRRC38 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC38_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -34bp_to_NM_001010847, uc001avb.2_5end |
EntrezGene: | LRRC38 |
HGNC: | 27005 |
UniProt: | Q5VT99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.57e-12 | 1 |