FFCP PHASE1:Hg19::chr11:12696002..12696022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7003 | |EntrezGene=7003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11714 | |HGNC=11714 | ||
|TSSclassifier=strong | |||
|UniProt=P28347,A4FUP2,Q59EF3 | |UniProt=P28347,A4FUP2,Q59EF3 | ||
|association_with_transcript=33bp_to_ENST00000361905,NM_021961,uc001mkj.3_5end | |||
|cluster_id=chr11:12696002..12696022,+ | |||
|description=CAGE_peak_2_at_TEAD1_5end | |||
|id=chr11:12696002..12696022,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.77e-18!180;CL:0000057!1.14e-13!75;CL:0002620!1.05e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.52e-09;23!CL:0000349;8.27e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.90e-14,76;CL:0002620,3.24e-09,23;CL:0000349,7.31e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.70e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!5.14e-18!238;UBERON:0009142!5.14e-18!238;UBERON:0000481!3.22e-16!347;UBERON:0003102!2.42e-15!95;UBERON:0002100!6.64e-15!216;UBERON:0000475!3.55e-14!365;UBERON:0005256!1.40e-12!143;UBERON:0004119!1.96e-12!169;UBERON:0000925!1.96e-12!169;UBERON:0006595!1.96e-12!169;UBERON:0001007!3.28e-12!155;UBERON:0001555!3.28e-12!155;UBERON:0007026!3.28e-12!155;UBERON:0000468!4.50e-11!659;UBERON:0004923!2.10e-10!57;UBERON:0000062!2.75e-09!511;UBERON:0000914!5.23e-09!83;UBERON:0002329!5.23e-09!83;UBERON:0003077!5.23e-09!83;UBERON:0003059!5.23e-09!83;UBERON:0007282!5.23e-09!83;UBERON:0009618!5.23e-09!83;UBERON:0007285!5.23e-09!83;UBERON:0000077!6.03e-09!130;UBERON:0002097!1.99e-08!40;UBERON:0000467!4.18e-08!625;UBERON:0000064!4.72e-08!219;UBERON:0000480!5.45e-08!626;UBERON:0004921!6.05e-08!129;UBERON:0004185!6.05e-08!129;UBERON:0002199!1.62e-07!45;UBERON:0002416!1.62e-07!45;UBERON:0004290!2.06e-07!70;UBERON:0000486!3.23e-07!82;UBERON:0002385!5.25e-07!63;UBERON:0001015!5.25e-07!63;UBERON:0000383!5.25e-07!63;UBERON:0005631!5.44e-07!14;UBERON:0000158!5.44e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.91e-07;10!UBERON:0000158;1.91e-07;10!UBERON:0004923;3.25e-07;55!UBERON:0000478;8.78e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.47e-15,99;UBERON:0003104,7.46e-13,160;UBERON:0009142,7.46e-13,160;UBERON:0004923,2.75e-12,66;UBERON:0004119,4.50e-12,160;UBERON:0000925,4.50e-12,160;UBERON:0006595,4.50e-12,160;UBERON:0001007,5.55e-12,145;UBERON:0001555,5.55e-12,145;UBERON:0007026,5.55e-12,145;UBERON:0002100,1.21e-11,199;UBERON:0005256,2.25e-09,122;UBERON:0002097,1.46e-08,41;UBERON:0002199,1.50e-07,46;UBERON:0002416,1.50e-07,46;UBERON:0005631,2.23e-07,14;UBERON:0000158,2.23e-07,14;UBERON:0004921,2.46e-07,118;UBERON:0007524,8.23e-07,73;UBERON:0000478,9.09e-07,24;UBERON:0002329,9.35e-07,71;UBERON:0003059,9.35e-07,71;UBERON:0007282,9.35e-07,71;UBERON:0004290,9.35e-07,71;UBERON:0009618,9.35e-07,71 | |||
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|phase1_expression=2.18014055124668,3.8538094300377,4.93340414335899,4.00293193412522,4.91657203870017,3.48935409640147,0,0.631719873426831,2.35067065379855,0.491467873003018,1.39560233594486,6.11635841964482,3.4289707169699,0.990130823680373,2.31978163009541,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,1.84681587115182,1.42800483870977,1.25381888591235,2.28988789704845,2.32686522623903,2.63639543149086,0,0,0,0,0,0.154816123316076,2.75826367343678,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,4.34732710268003,4.3372698286148,2.00535164254356,4.92478164466801,1.5905718941022,1.94653948121054,1.70162670895322,1.55210578223795,1.58102614247627,2.22664428346111,2.5500670180478,1.48313777113772,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0.838998872419812,0,0,0.258416759169329,1.42306505074684,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0,0.446498641420399,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,2.18047026071267,5.4666914686485,3.41902381494365,6.3556406790345,5.16305917347865,2.4826786753885,1.68203280042692,4.2699598291882,0.98667019366864,3.7345324247972,1.48181739276657,0.817309515567294,1.21085942115945,0.576175924479999,3.28050004567315,4.68240115245481,1.71141546463335,3.58676833324323,2.58355897016283,2.42809416552197,3.23036855415172,4.08308342509786,2.94802361548243,4.64966015290945,8.31602000097437,9.89067717114228,0,2.87447256726495,2.86171393721913,2.87772595705518,8.58898758000967,6.14568669233173,5.82326812018137,11.8688066536211,1.70148274740032,4.84352016359927,8.11518077510556,5.08636562782948,3.60109315301283,4.43125875725287,4.89517026086695,5.21127197728451,5.06328996723799,3.60516919096435,7.57301322732343,4.87864462804187,4.36444353410792,7.10019185033229,3.62707553619505,4.74769658469365,1.93260853163297,1.09098448236334,1.72082757233402,1.09776335516636,0.530119073285941,0.929551542956147,1.34759371519982,0.756962552626885,1.09493207722749,1.56449532329816,1.28648187638577,1.38134921352481,7.89425477654364,4.33127689001751,3.07597680103594,3.70886318171824,5.54325368732009,4.74264082749294,6.31850387867978,6.8808479542218,3.50561401216427,4.70931516300831,4.23221872641029,0,0,4.5273141246454,7.3504355692771,1.26755034821831,0.982827216677626,0.590789906681404,0,2.7057456479485,1.88724591328378,2.85350742062426,2.24803506515239,2.81481122752566,1.574003567695,1.3032332212413,2.07986957055916,2.88662684050547,1.04337364477569,4.22671299248958,0.433099343283221,0,0.570762456703795,0,1.71697232418975,0,0,0,0,2.01578553838631,1.84307626415102,2.5971971583826,1.74380363108377,1.91691339582606,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.571481048629521,1.90994212779139,0,0,2.26220483947312,2.40274446275134,3.14409075893636,0.897048674762886,0.87192013766656,0.80672114403045,4.65378176728,7.15312891703765,0,9.0418959638856,6.24044621468197,2.31486636835928,1.41849132023278,1.5985330740966,4.86125178437702,5.42621605391443,1.64648067356154,0.65147236858747,5.33087923113819,4.75171123760058,3.91871190177462,2.61460037580088,4.29883862082845,0,0,0,3.83399768786532,3.44585807502342,2.85273810081437,4.05387658669222,1.2328579353023,2.50685348535854,0,0,0,0,2.7950408664471,1.30139853857622,0,1.00509759200609,0.637938751653163,0,0,0.414415513436035,3.0672872929785,1.00034104211935,2.17012018959788,8.11086359970148,6.42344359669782,11.1968714674094,17.9226364938851,1.50473049863859,2.27407504055985,2.0694614258501,3.32112799267718,3.87175253937577,5.90808578382963,0.195801157462741,0.686286847621712,0,0,0,3.33440328590885,1.66435439510497,2.41912234663744,2.48107807818777,6.29194090481056,3.64858122762996,4.35673107469383,5.11707249066703,5.46903331888265,0,1.69630663182921,1.59805552781814,2.21743321237285,0.519254429183621,2.67283870457906,2.29632954224082,3.00759705454927,3.03867263488458,2.52591785962135,6.00900854422166,7.21184282276833,3.15839729035188,2.46449078734127,1.56869953835371,1.46139224653261,0.949964660035881,0,0,1.0795795805107,0,1.08378575017541,1.00337954770971,3.82314409567557,4.15538004464362,1.79099803777743,0,0,2.05160100093111,2.29610251989794,1.30151357865721,2.57602529119306,1.46511143709349,1.23764249880882,2.29706215198469,1.95018073810956,9.64103579064957,1.83674364755032,1.69453478826109,0.614014698904518,2.89456802217514,2.68550612170684,2.0302337147992,2.47157219506693,3.82837753280971,0.495854746082934,1.72971060628596,5.74257206225629,1.51736671283325,3.253918845081,3.1481234683064,2.0911118104818,2.7723022215848,1.59691809095107,3.47973196830029,0.55597265731176,2.28999818787186,3.34942532423701,2.53103539774981,6.29079639948622,2.04718233049067,2.1396949401696,1.27281299170375,1.56989728039846,4.8565563547495,4.11805544604082,4.12343408209902,1.2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| ||
|short_description=p2@TEAD1 | |||
}} | }} |
Latest revision as of 15:30, 16 September 2015
Short description: | p2@TEAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TEAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000361905, NM_021961, uc001mkj.3_5end |
EntrezGene: | TEAD1 |
HGNC: | 11714 |
UniProt: | P28347A4FUP2Q59EF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.90e-14 | 76 |
skin fibroblast | 3.24e-09 | 23 |
extraembryonic cell | 7.31e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.47e-15 | 99 |
mesenchyme | 7.46e-13 | 160 |
entire embryonic mesenchyme | 7.46e-13 | 160 |
organ component layer | 2.75e-12 | 66 |
endoderm-derived structure | 4.50e-12 | 160 |
endoderm | 4.50e-12 | 160 |
presumptive endoderm | 4.50e-12 | 160 |
digestive system | 5.55e-12 | 145 |
digestive tract | 5.55e-12 | 145 |
primitive gut | 5.55e-12 | 145 |
trunk | 1.21e-11 | 199 |
trunk mesenchyme | 2.25e-09 | 122 |
skin of body | 1.46e-08 | 41 |
integument | 1.50e-07 | 46 |
integumental system | 1.50e-07 | 46 |
extraembryonic membrane | 2.23e-07 | 14 |
membranous layer | 2.23e-07 | 14 |
subdivision of digestive tract | 2.46e-07 | 118 |
dense mesenchyme tissue | 8.23e-07 | 73 |
extraembryonic structure | 9.09e-07 | 24 |
somite | 9.35e-07 | 71 |
presomitic mesoderm | 9.35e-07 | 71 |
presumptive segmental plate | 9.35e-07 | 71 |
dermomyotome | 9.35e-07 | 71 |
trunk paraxial mesoderm | 9.35e-07 | 71 |