FFCP PHASE1:Hg19::chr1:1361245..1361298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643965 | |EntrezGene=643965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37099 | |HGNC=37099 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKF7 | |UniProt=A6NKF7 | ||
|association_with_transcript=-209bp_to_NM_001146685,uc010nyp.1_5end | |association_with_transcript=-209bp_to_NM_001146685,uc010nyp.1_5end | ||
|cluster_id=chr1:1361245..1361298,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_TMEM88B_5end | |description=CAGE_peak_1_at_TMEM88B_5end | ||
|id=chr1:1361245..1361298,+ | |id=chr1:1361245..1361298,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.68e-07!5 | |ontology_enrichment_celltype=CL:0002322!6.68e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.38e-18;82!UBERON:0006241;4.55e-10;3!UBERON:0003057;4.55e-10;3!UBERON:0006215;9.16e-09;3!UBERON:0002532;3.50e-08;206!UBERON:0010316;3.50e-08;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-48!57;UBERON:0005068!2.24e-48!57;UBERON:0006241!2.24e-48!57;UBERON:0007135!2.24e-48!57;UBERON:0005743!1.85e-46!86;UBERON:0001017!2.07e-44!82;UBERON:0000073!3.55e-42!94;UBERON:0001016!3.55e-42!94;UBERON:0003075!6.29e-40!86;UBERON:0007284!6.29e-40!86;UBERON:0000955!3.92e-39!69;UBERON:0006238!3.92e-39!69;UBERON:0002616!4.88e-39!59;UBERON:0007023!6.89e-39!115;UBERON:0002346!2.52e-37!90;UBERON:0002020!1.96e-32!34;UBERON:0003528!1.96e-32!34;UBERON:0001893!2.35e-32!34;UBERON:0002780!3.46e-32!41;UBERON:0001890!3.46e-32!41;UBERON:0006240!3.46e-32!41;UBERON:0003080!3.67e-31!42;UBERON:0002791!5.14e-31!33;UBERON:0001869!2.29e-29!32;UBERON:0000153!5.70e-27!129;UBERON:0007811!5.70e-27!129;UBERON:0004121!2.39e-26!169;UBERON:0003056!3.48e-26!61;UBERON:0000924!3.10e-25!173;UBERON:0006601!3.10e-25!173;UBERON:0000033!9.03e-25!123;UBERON:0002619!1.51e-21!22;UBERON:0000956!4.49e-20!25;UBERON:0000203!4.49e-20!25;UBERON:0001950!6.00e-19!20;UBERON:0003076!1.79e-18!15;UBERON:0003057!1.79e-18!15;UBERON:0004732!1.12e-15!13;UBERON:0002308!1.44e-14!9;UBERON:0000125!1.44e-14!9;UBERON:0004733!3.72e-14!12;UBERON:0002028!3.72e-14!12;UBERON:0007277!3.72e-14!12;UBERON:0002420!3.76e-14!9;UBERON:0007245!3.76e-14!9;UBERON:0010009!3.76e-14!9;UBERON:0010011!3.76e-14!9;UBERON:0000454!3.76e-14!9;UBERON:0009663!1.45e-11!7;UBERON:0000064!5.67e-11!219;UBERON:0000025!9.68e-11!194;UBERON:0002298!2.53e-10!8;UBERON:0002680!6.55e-10!9;UBERON:0001895!6.55e-10!9;UBERON:0010092!6.55e-10!9;UBERON:0000200!1.01e-09!6;UBERON:0000349!2.68e-08!5;UBERON:0000483!4.69e-08!309;UBERON:0000119!8.41e-08!312;UBERON:0004111!2.58e-07!241;UBERON:0001871!5.18e-07!7;UBERON:0000369!6.04e-07!4;UBERON:0002435!6.04e-07!4;UBERON:0000204!6.04e-07!4;UBERON:0010082!6.04e-07!4;UBERON:0000475!7.71e-07!365;UBERON:0000062!9.39e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!2.24e-48!57;UBERON:0005068!2.24e-48!57;UBERON:0006241!2.24e-48!57;UBERON:0007135!2.24e-48!57;UBERON:0005743!1.85e-46!86;UBERON:0001017!2.07e-44!82;UBERON:0000073!3.55e-42!94;UBERON:0001016!3.55e-42!94;UBERON:0003075!6.29e-40!86;UBERON:0007284!6.29e-40!86;UBERON:0000955!3.92e-39!69;UBERON:0006238!3.92e-39!69;UBERON:0002616!4.88e-39!59;UBERON:0007023!6.89e-39!115;UBERON:0002346!2.52e-37!90;UBERON:0002020!1.96e-32!34;UBERON:0003528!1.96e-32!34;UBERON:0001893!2.35e-32!34;UBERON:0002780!3.46e-32!41;UBERON:0001890!3.46e-32!41;UBERON:0006240!3.46e-32!41;UBERON:0003080!3.67e-31!42;UBERON:0002791!5.14e-31!33;UBERON:0001869!2.29e-29!32;UBERON:0000153!5.70e-27!129;UBERON:0007811!5.70e-27!129;UBERON:0004121!2.39e-26!169;UBERON:0003056!3.48e-26!61;UBERON:0000924!3.10e-25!173;UBERON:0006601!3.10e-25!173;UBERON:0000033!9.03e-25!123;UBERON:0002619!1.51e-21!22;UBERON:0000956!4.49e-20!25;UBERON:0000203!4.49e-20!25;UBERON:0001950!6.00e-19!20;UBERON:0003076!1.79e-18!15;UBERON:0003057!1.79e-18!15;UBERON:0004732!1.12e-15!13;UBERON:0002308!1.44e-14!9;UBERON:0000125!1.44e-14!9;UBERON:0004733!3.72e-14!12;UBERON:0002028!3.72e-14!12;UBERON:0007277!3.72e-14!12;UBERON:0002420!3.76e-14!9;UBERON:0007245!3.76e-14!9;UBERON:0010009!3.76e-14!9;UBERON:0010011!3.76e-14!9;UBERON:0000454!3.76e-14!9;UBERON:0009663!1.45e-11!7;UBERON:0000064!5.67e-11!219;UBERON:0000025!9.68e-11!194;UBERON:0002298!2.53e-10!8;UBERON:0002680!6.55e-10!9;UBERON:0001895!6.55e-10!9;UBERON:0010092!6.55e-10!9;UBERON:0000200!1.01e-09!6;UBERON:0000349!2.68e-08!5;UBERON:0000483!4.69e-08!309;UBERON:0000119!8.41e-08!312;UBERON:0004111!2.58e-07!241;UBERON:0001871!5.18e-07!7;UBERON:0000369!6.04e-07!4;UBERON:0002435!6.04e-07!4;UBERON:0000204!6.04e-07!4;UBERON:0010082!6.04e-07!4;UBERON:0000475!7.71e-07!365;UBERON:0000062!9.39e-07!511 | ||
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|short_description=p1@TMEM88B | |short_description=p1@TMEM88B | ||
}} | }} |
Latest revision as of 15:24, 16 September 2015
Short description: | p1@TMEM88B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM88B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -209bp_to_NM_001146685, uc010nyp.1_5end |
EntrezGene: | TMEM88B |
HGNC: | 37099 |
UniProt: | A6NKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data