FFCP PHASE1:Hg19::chr13:113760098..113760110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2155 | |EntrezGene=2155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3544 | |HGNC=3544 | ||
|TSSclassifier=strong | |||
|UniProt=P08709,F5H8B0 | |UniProt=P08709,F5H8B0 | ||
|association_with_transcript=0bp_to_ENST00000346342,ENST00000541084,NM_000131,NM_019616,uc001vsv.2,uc001vsw.2,uc010agp.1,uc010tjt.1_5end | |association_with_transcript=0bp_to_ENST00000346342,ENST00000541084,NM_000131,NM_019616,uc001vsv.2,uc001vsw.2,uc010agp.1,uc010tjt.1_5end | ||
|cluster_id=chr13:113760098..113760110,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_F7_5end | |description=CAGE_peak_1_at_F7_5end | ||
|id=chr13:113760098..113760110,+ | |id=chr13:113760098..113760110,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.57e-28!12;CL:0000417!3.57e-28!12;CL:0000668!3.57e-28!12;CL:0000414!3.57e-28!12;CL:0000412!3.57e-28!12;CL:0000182!3.57e-28!12;CL:0002322!9.42e-10!5;CL:0000223!4.01e-09!59 | |ontology_enrichment_celltype=CL:0000181!3.57e-28!12;CL:0000417!3.57e-28!12;CL:0000668!3.57e-28!12;CL:0000414!3.57e-28!12;CL:0000412!3.57e-28!12;CL:0000182!3.57e-28!12;CL:0002322!9.42e-10!5;CL:0000223!4.01e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.97e-40;12!CL:0002563;7.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-40,12;CL:0000223,9.11e-16,58;CL:0002563,7.72e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.46e-32;11!UBERON:0009497;4.97e-27;13!UBERON:0001041;1.58e-15;30!UBERON:0003104;4.51e-15;31!CL:0000223;2.34e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.69e-41;19!UBERON:0006925;1.69e-41;19!UBERON:0002423;2.74e-31;25!UBERON:0002365;2.80e-24;31!UBERON:0002330;2.80e-24;31!UBERON:0002368;2.74e-21;33!UBERON:0000949;2.89e-15;43!UBERON:0001242;7.53e-11;4!UBERON:0001262;7.53e-11;4!UBERON:0004786;7.53e-11;4!UBERON:0004808;7.53e-11;4!UBERON:0001277;7.53e-11;4!UBERON:0001007;3.97e-10;81!UBERON:0002530;1.02e-09;57!UBERON:0005172;2.22e-09;52!UBERON:0005173;2.22e-09;52!UBERON:0000160;5.97e-09;17!UBERON:0002108;9.95e-09;4!UBERON:0002417;1.05e-08;58!UBERON:0000916;1.05e-08;58!UBERON:0005409;4.86e-07;22 | |||
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|short_description=p1@F7 | |short_description=p1@F7 | ||
}} | }} |
Latest revision as of 15:21, 16 September 2015
Short description: | p1@F7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_F7_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000346342, ENST00000541084, NM_000131, NM_019616, uc001vsv.2, uc001vsw.2, uc010agp.1, uc010tjt.1_5end |
EntrezGene: | F7 |
HGNC: | 3544 |
UniProt: | P08709F5H8B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.27e-40 | 12 |
endodermal cell | 9.11e-16 | 58 |
intestinal epithelial cell | 7.72e-11 | 4 |