FFCP PHASE1:Hg19::chr9:139693802..139693815,+: Difference between revisions
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|id=chr9:139693802..139693815,+
|short_description=p8@KIAA1984
|description=CAGE_peak_8_at_KIAA1984_5end
|association_with_transcript=-51bp_to_ENST00000430612_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84960 | |EntrezGene=84960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28236 | |HGNC=28236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000430612_5end | |||
|cluster_id=chr9:139693802..139693815,+ | |||
|description=CAGE_peak_8_at_KIAA1984_5end | |||
|id=chr9:139693802..139693815,+ | |||
|ontology_enrichment_celltype=CL:0000784!6.66e-08!3;CL:0002553!8.21e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.59e-25;12!CL:0002535;1.17e-17;2!CL:0002327;1.27e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12;CL:0002535,1.07e-17,2;CL:0002327,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.05e-34;1!UBERON:0004161;9.31e-28;11!UBERON:0009497;1.24e-23;13!UBERON:0001041;1.04e-10;30!UBERON:0003104;3.55e-10;31 | |||
|ontology_enrichment_disease=DOID:305!4.84e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:7;2.10e-13;39!DOID:5093;1.27e-09;4!DOID:1612;1.27e-09;4!DOID:4362;7.25e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.56e-14,39;DOID:5093,1.44e-09,4;DOID:1612,1.44e-09,4;DOID:305,3.00e-08,106;DOID:4362,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005409!8.70e-13!35;UBERON:0000059!1.08e-11!11;UBERON:0000160!8.59e-11!27;UBERON:0004907!5.79e-10!5;UBERON:0001155!2.40e-09!9;UBERON:0004921!4.28e-09!129;UBERON:0004185!4.28e-09!129;UBERON:0001007!6.40e-08!155;UBERON:0001555!6.40e-08!155;UBERON:0007026!6.40e-08!155;UBERON:0004119!6.08e-07!169;UBERON:0000925!6.08e-07!169;UBERON:0006595!6.08e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.17e-17;2!UBERON:0004801;1.17e-17;2!UBERON:0002365;1.00e-16;31!UBERON:0002330;1.00e-16;31!UBERON:0002107;1.89e-16;19!UBERON:0006925;1.89e-16;19!UBERON:0002423;1.07e-12;25!UBERON:0001911;1.27e-09;4!UBERON:0002368;4.13e-09;33!UBERON:0000949;3.43e-07;43!UBERON:0000002;9.23e-07;6!UBERON:0001560;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.07e-17,2;UBERON:0004801,1.07e-17,2;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002107,1.75e-16,19;UBERON:0006925,1.75e-16,19;UBERON:0008836,1.75e-16,19;UBERON:0008835,2.38e-14,22;UBERON:0003894,2.38e-14,22;UBERON:0009854,9.23e-14,23;UBERON:0007499,1.01e-12,25;UBERON:0009497,1.01e-12,25;UBERON:0000015,1.01e-12,25;UBERON:0002423,1.01e-12,25;UBERON:0006235,1.01e-12,25;UBERON:0004161,1.01e-12,25;UBERON:0009856,2.90e-12,26;UBERON:0001911,1.44e-09,4;UBERON:0005333,1.44e-09,4;UBERON:0008425,1.44e-09,4;UBERON:0005311,1.44e-09,4;UBERON:0002530,1.45e-09,59;UBERON:0002368,2.65e-09,35;UBERON:0000949,2.18e-07,45;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
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|short_description=p8@KIAA1984 | |||
}} | }} |
Latest revision as of 13:23, 16 September 2015
Short description: | p8@KIAA1984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KIAA1984_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_ENST00000430612_5end |
EntrezGene: | KIAA1984 |
HGNC: | 28236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
epithelial cell of cervix | 1.07e-17 | 2 |
mammary gland epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.07e-17 | 2 |
cervix epithelium | 1.07e-17 | 2 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
liver | 1.75e-16 | 19 |
digestive gland | 1.75e-16 | 19 |
liver bud | 1.75e-16 | 19 |
hepatic diverticulum | 2.38e-14 | 22 |
liver primordium | 2.38e-14 | 22 |
digestive tract diverticulum | 9.23e-14 | 23 |
epithelial sac | 1.01e-12 | 25 |
epithelium of foregut-midgut junction | 1.01e-12 | 25 |
anatomical boundary | 1.01e-12 | 25 |
hepatobiliary system | 1.01e-12 | 25 |
foregut-midgut junction | 1.01e-12 | 25 |
septum transversum | 1.01e-12 | 25 |
sac | 2.90e-12 | 26 |
mammary gland | 1.44e-09 | 4 |
mammary bud | 1.44e-09 | 4 |
mammary ridge | 1.44e-09 | 4 |
mammary placode | 1.44e-09 | 4 |
gland | 1.45e-09 | 59 |
endocrine gland | 2.65e-09 | 35 |
endocrine system | 2.18e-07 | 45 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.56e-14 | 39 |
thoracic cancer | 1.44e-09 | 4 |
breast cancer | 1.44e-09 | 4 |
carcinoma | 3.00e-08 | 106 |
cervical cancer | 7.01e-08 | 5 |