FFCP PHASE1:Hg19::chrX:75648162..75648175,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:75648162..75648175,+
|short_description=p2@MAGEE1
|description=CAGE_peak_2_at_MAGEE1_5end
|association_with_transcript=45bp_to_uc004ecm.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57692 | |EntrezGene=57692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24934 | |HGNC=24934 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCI5 | |UniProt=Q9HCI5 | ||
|association_with_transcript=45bp_to_uc004ecm.1_5end | |||
|cluster_id=chrX:75648162..75648175,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_MAGEE1_5end | |||
|id=chrX:75648162..75648175,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.49e-10!18;CL:0000789!3.49e-10!18;CL:0002420!3.49e-10!18;CL:0002419!3.49e-10!18;CL:0000790!3.49e-10!18;CL:0000624!4.93e-08!6;CL:0000084!2.56e-07!25;CL:0000827!2.56e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.00e-08;18!CL:0000789;5.00e-08;18!CL:0002419;5.00e-08;18!CL:0000624;5.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.45e-08,18;CL:0000789,3.45e-08,18;CL:0002420,3.45e-08,18;CL:0002419,3.45e-08,18;CL:0000790,3.45e-08,18;CL:0000624,4.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.43e-11;82!UBERON:0010122;6.55e-10;2!CL:0000790;5.00e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.44e-36!82;UBERON:0005743!4.37e-35!86;UBERON:0001049!1.21e-32!57;UBERON:0005068!1.21e-32!57;UBERON:0006241!1.21e-32!57;UBERON:0007135!1.21e-32!57;UBERON:0000073!4.11e-31!94;UBERON:0001016!4.11e-31!94;UBERON:0002020!7.88e-29!34;UBERON:0003528!7.88e-29!34;UBERON:0001893!9.87e-29!34;UBERON:0007023!1.20e-28!115;UBERON:0000955!2.56e-28!69;UBERON:0006238!2.56e-28!69;UBERON:0002791!1.85e-27!33;UBERON:0001869!1.01e-26!32;UBERON:0002616!3.52e-26!59;UBERON:0002780!1.09e-25!41;UBERON:0001890!1.09e-25!41;UBERON:0006240!1.09e-25!41;UBERON:0003080!8.11e-25!42;UBERON:0002346!1.38e-23!90;UBERON:0003075!3.96e-23!86;UBERON:0007284!3.96e-23!86;UBERON:0002619!3.88e-22!22;UBERON:0001950!1.01e-19!20;UBERON:0000956!1.04e-18!25;UBERON:0000203!1.04e-18!25;UBERON:0003056!5.41e-17!61;UBERON:0000153!2.29e-15!129;UBERON:0007811!2.29e-15!129;UBERON:0000033!2.07e-14!123;UBERON:0000924!4.33e-14!173;UBERON:0006601!4.33e-14!173;UBERON:0004121!1.50e-13!169;UBERON:0002420!3.57e-12!9;UBERON:0007245!3.57e-12!9;UBERON:0010009!3.57e-12!9;UBERON:0010011!3.57e-12!9;UBERON:0000454!3.57e-12!9;UBERON:0002308!5.56e-12!9;UBERON:0000125!5.56e-12!9;UBERON:0009663!1.24e-09!7;UBERON:0003076!6.80e-09!15;UBERON:0003057!6.80e-09!15;UBERON:0000025!7.15e-09!194;UBERON:0001872!4.25e-08!5;UBERON:0002298!4.92e-08!8;UBERON:0000349!6.16e-08!5;UBERON:0002021!1.13e-07!5;UBERON:0000369!8.46e-07!4;UBERON:0002435!8.46e-07!4;UBERON:0000204!8.46e-07!4;UBERON:0010082!8.46e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.37e-59;22!UBERON:0001869;3.22e-58;32!UBERON:0003528;8.65e-58;34!UBERON:0002020;8.65e-58;34!UBERON:0001893;1.97e-55;34!UBERON:0002791;1.55e-53;32!UBERON:0000956;1.45e-51;25!UBERON:0000203;1.45e-51;25!UBERON:0001950;3.06e-51;20!UBERON:0002780;1.25e-37;41!UBERON:0001890;1.25e-37;41!UBERON:0000073;3.26e-28;53!UBERON:0002616;3.26e-28;53!UBERON:0001872;9.43e-23;5!UBERON:0000955;1.82e-22;68!UBERON:0000349;1.17e-21;5!UBERON:0001017;3.14e-20;75!UBERON:0000369;1.93e-18;4!UBERON:0002435;1.93e-18;4!UBERON:0000204;1.93e-18;4!UBERON:0002420;2.61e-17;9!UBERON:0000125;2.61e-17;9!UBERON:0007245;2.61e-17;9!UBERON:0002308;2.61e-17;9!UBERON:0010009;2.61e-17;9!UBERON:0010011;2.61e-17;9!UBERON:0000454;2.61e-17;9!UBERON:0002021;3.45e-15;5!UBERON:0001016;7.85e-15;83!UBERON:0005383;3.49e-14;3!UBERON:0005382;3.49e-14;3!UBERON:0000988;1.71e-13;3!UBERON:0000200;2.03e-12;6!UBERON:0002298;1.18e-11;6!UBERON:0009663;1.40e-10;7!UBERON:0001871;2.87e-10;6!UBERON:0001873;6.55e-10;2!UBERON:0001876;1.45e-09;2!UBERON:0001954;1.45e-09;2!UBERON:0002148;1.45e-09;2!UBERON:0006331;1.45e-09;2!UBERON:0009662;1.45e-09;2!UBERON:0003022;1.45e-09;2!UBERON:0002421;1.45e-09;2!UBERON:0002600;1.45e-09;2!UBERON:0007023;7.67e-09;114!UBERON:0011216;6.77e-07;132!UBERON:0001870;7.15e-07;3 | |||
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|short_description=p2@MAGEE1 | |||
}} | }} |
Latest revision as of 11:14, 16 September 2015
Short description: | p2@MAGEE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAGEE1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 45bp_to_uc004ecm.1_5end |
EntrezGene: | MAGEE1 |
HGNC: | 24934 |
UniProt: | Q9HCI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.45e-08 | 18 |
alpha-beta T cell | 3.45e-08 | 18 |
immature T cell | 3.45e-08 | 18 |
mature T cell | 3.45e-08 | 18 |
immature alpha-beta T cell | 3.45e-08 | 18 |
CD4-positive, alpha-beta T cell | 4.95e-07 | 6 |