FFCP PHASE1:Hg19::chr20:43374443..43374458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60598 | |EntrezGene=60598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13814 | |HGNC=13814 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H427 | |UniProt=Q9H427 | ||
|association_with_transcript=22bp_to_ENST00000372861_5end | |association_with_transcript=22bp_to_ENST00000372861_5end | ||
|cluster_id=chr20:43374443..43374458,+ | |||
|coexpression_cluster_id=C4039 | |||
|description=CAGE_peak_2_at_KCNK15_5end | |description=CAGE_peak_2_at_KCNK15_5end | ||
|id=chr20:43374443..43374458,+ | |id=chr20:43374443..43374458,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000153;5.13e-13;9!CL:0000447;5.13e-13;9!CL:0000138;1.41e-10;6!CL:0000499;7.92e-09;28!CL:0002564;1.15e-08;3!CL:0002178;8.76e-08;3!CL:0002540;1.88e-07;6!CL:0000327;2.42e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.11e-13,9;CL:0000447,3.11e-13,9;CL:0000058,1.26e-10,6;CL:0000138,1.26e-10,6;CL:0000499,6.79e-09,28;CL:0002564,1.19e-08,3;CL:0002178,6.39e-08,3;CL:0000327,1.83e-07,15;CL:0002540,1.95e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!1.46e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;3.96e-10;25!DOID:5093;8.56e-07;4!DOID:1612;8.56e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.98e-10,25;DOID:305,5.64e-08,106;DOID:5093,8.69e-07,4;DOID:1612,8.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.18e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.21e-15;8!UBERON:0000982;2.21e-15;8!UBERON:0004770;2.21e-15;8!UBERON:0011135;1.80e-13;5!UBERON:0002216;1.80e-13;5!UBERON:0011134;1.80e-13;5!UBERON:0002209;1.80e-13;5!UBERON:0002213;1.80e-13;5!UBERON:0007844;1.80e-13;5!UBERON:0011138;1.80e-13;5!UBERON:0001130;1.80e-13;5!UBERON:0001066;1.80e-13;5!UBERON:0001468;1.80e-13;5!UBERON:0004765;7.58e-12;26!UBERON:0001737;1.78e-11;9!UBERON:0001557;1.78e-11;9!UBERON:0001434;2.25e-09;36!UBERON:0002418;1.12e-08;3!UBERON:0004755;1.12e-08;3!UBERON:0002242;1.15e-08;3!UBERON:0000075;5.38e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.34e-15,8;UBERON:0000982,1.34e-15,8;UBERON:0004770,1.34e-15,8;UBERON:0011135,1.71e-13,5;UBERON:0002216,1.71e-13,5;UBERON:0011134,1.71e-13,5;UBERON:0002209,1.71e-13,5;UBERON:0002213,1.71e-13,5;UBERON:0005856,1.71e-13,5;UBERON:0005866,1.71e-13,5;UBERON:0005863,1.71e-13,5;UBERON:0007844,1.71e-13,5;UBERON:0011138,1.71e-13,5;UBERON:0001130,1.71e-13,5;UBERON:0001066,1.71e-13,5;UBERON:0001468,1.71e-13,5;UBERON:0001737,2.41e-11,9;UBERON:0002418,1.13e-08,3;UBERON:0004755,1.13e-08,3;UBERON:0002242,1.19e-08,3;UBERON:0003068,1.19e-08,3;UBERON:0002328,1.19e-08,3;UBERON:0004880,1.19e-08,3;UBERON:0000075,4.32e-07,16 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0,0,0,3.58922423584135,12.2617029019329,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97583067623023,3.50936537445123,5.79386075843295,0,1.45990461090791,0.189069634328136,0,0.087834785693126,0.72038491523742,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0,1.95309476578576,0,0,0.640672166455702,1.27159140695737,0,0.309157587715317,0,0,0,0,0,0.552299391853796,1.13152239773168,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.464367928031979,0,1.53798840051797,1.01150814046861,1.44606617930089,1.10293972732394,0.871517776369625,0.949082476444386,1.21348177344148,1.56977172100277,1.92373578473195,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0,0,0,0,4.74122638775565,6.86788929675898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,1.41849132023278,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,11.41030872988,3.50119364741774,2.17012018959788,0.415941723061614,0.892144943985809,1.73472656537328,2.57711112983969,9.02838299183157,13.6444502433591,3.10419213877515,0,0,0.434418072340414,1.95801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,1.40953064181271,0,0.321707842287215,1.48418066444991,0,0.355123450626254,0.246381468041427,0,0.232420756919918,0.241718899183244,0,0.460404944679482,0.229628896329213,0.182091168006717,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48879851773927,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,2.45695363593188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,1.31843099381408,0,4.18420775327246,0,0.503865495708552,0,0,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,1.11136990144637,0,0.185536196323703,0,10.6775382044946,0,0.724999575434793,0,0,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,14.5277199261641,0.141353071433941,0,0,0.353830258013357,0,1.18608451472249,1.11207545051853,1.56632924258183,0,0,0,0,0.19566461893209,0,1.97292201424695,0,0,3.28570214068137,0,0,0,0,0.313932918407225,0,0.569219092059585,0,10.7607037767781,0,0,1.57254001417827,1.54787429224455,4.93457289574334,5.62787741563629,5.3375047084586,0.193978032976839,2.11814704059601,0.225980740780532,0,0,0.0633107959558787,8.21315807486173,0,1.49417096317547,1.59847687665704,3.16998917739033,0,0,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0.837847203816763,1.14580212005842,1.43574604915363,0,0.429226048136571,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.315222829196793,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0.26446520348538,0.342173675768659,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0.544017803369474,1.2534494701135,0.612691153526923,1.31149052283922,0.157054096250234,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0.758245587708239,0,0,0,0.144921028610825,0.447764408660622,1.16856654923612,1.10961172300523,28.4104507912634,33.9616667365976,17.7962244319307,0.457680136793847,0.604923695052956,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,1.01024846629776,0,0,0,0.260994291965212,0,0,1.22368352253234,0,0.308801447160972,0,0,0,0,0,0,2.12701969324168,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0.139879507719444,0,0.383683113910955,0.431299245586727,0.157265941855896,0,0,0,0,0,0,0,0,2.46873160583479,0,0,0,0.159633859057151,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0.577628330751691,0,0,0,1.42899623863589,1.81534561833168,0,0,1.31017534008077,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0.197318320688547,1.77290761325952,2.33585943973345,0.235479278551542,0.942693539496011,0,0,0,0,0.428859265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| ||
|short_description=p2@KCNK15 | |short_description=p2@KCNK15 | ||
}} | }} |
Latest revision as of 08:43, 16 September 2015
Short description: | p2@KCNK15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNK15_5end |
Coexpression cluster: | C4039_mesenchymal_Osteoblast_tenocyte_clear_endometrioid_Anulus_breast |
Association with transcript: | 22bp_to_ENST00000372861_5end |
EntrezGene: | KCNK15 |
HGNC: | 13814 |
UniProt: | Q9H427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.11e-13 | 9 |
carbohydrate secreting cell | 3.11e-13 | 9 |
chondroblast | 1.26e-10 | 6 |
chondrocyte | 1.26e-10 | 6 |
stromal cell | 6.79e-09 | 28 |
nucleus pulposus cell of intervertebral disc | 1.19e-08 | 3 |
epithelial cell of stomach | 6.39e-08 | 3 |
extracellular matrix secreting cell | 1.83e-07 | 15 |
mesenchymal stem cell of the bone marrow | 1.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.34e-15 | 8 |
skeletal joint | 1.34e-15 | 8 |
articular system | 1.34e-15 | 8 |
intervertebral cartilage | 1.71e-13 | 5 |
symphysis | 1.71e-13 | 5 |
nonsynovial joint | 1.71e-13 | 5 |
fibrous joint | 1.71e-13 | 5 |
cartilaginous joint | 1.71e-13 | 5 |
developing mesenchymal condensation | 1.71e-13 | 5 |
pre-cartilage condensation | 1.71e-13 | 5 |
cartilaginous condensation | 1.71e-13 | 5 |
cartilage element | 1.71e-13 | 5 |
post-cranial axial skeletal system | 1.71e-13 | 5 |
vertebral column | 1.71e-13 | 5 |
intervertebral disk | 1.71e-13 | 5 |
intervertebral joint | 1.71e-13 | 5 |
larynx | 2.41e-11 | 9 |
cartilage tissue | 1.13e-08 | 3 |
skeletal tissue | 1.13e-08 | 3 |
nucleus pulposus | 1.19e-08 | 3 |
axial mesoderm | 1.19e-08 | 3 |
notochord | 1.19e-08 | 3 |
chordamesoderm | 1.19e-08 | 3 |
subdivision of skeletal system | 4.32e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.98e-10 | 25 |
carcinoma | 5.64e-08 | 106 |
thoracic cancer | 8.69e-07 | 4 |
breast cancer | 8.69e-07 | 4 |