FFCP PHASE1:Hg19::chr16:3062916..3062930,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2051 | |||
|TSSclassifier=strong | |||
|UniProt=O95484 | |||
|association_with_transcript=459bp_to_ENST00000445369,NM_020982,uc010uwo.1_5end | |||
|cluster_id=chr16:3062916..3062930,+ | |||
|description=CAGE_peak_1_at_CLDN9_5end | |||
|id=chr16:3062916..3062930,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-12!254;CL:0002322!2.46e-09!5;CL:0000223!3.39e-07!59;CL:0000349!4.43e-07!3;CL:0002577!4.43e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.25e-18;19!CL:0002577;1.07e-12;3!CL:0002322;2.22e-11;5!CL:0000123;8.32e-09;2!CL:0000242;8.32e-09;2!CL:0002536;3.13e-08;2!CL:0002537;8.46e-08;5!CL:1000415;8.88e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.81e-18,19;CL:0002577,1.03e-12,3;CL:0002322,1.50e-11,5;CL:0000066,4.91e-11,253;CL:0000242,8.49e-09,2;CL:0002536,3.63e-08,2;CL:0002537,8.56e-08,5;CL:1000415,9.21e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.11e-17!106;DOID:0050687!9.30e-12!143;DOID:299!4.83e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;9.62e-11;25!DOID:5093;3.04e-09;4!DOID:1612;3.04e-09;4!DOID:305;1.29e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.24e-14,106;DOID:299,8.53e-11,25;DOID:5093,2.51e-09,4;DOID:1612,2.51e-09,4;DOID:0050687,7.44e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.58e-18!14;UBERON:0000158!3.58e-18!14;UBERON:0004119!2.97e-13!169;UBERON:0000925!2.97e-13!169;UBERON:0006595!2.97e-13!169;UBERON:0003124!3.36e-13!7;UBERON:0001007!1.28e-10!155;UBERON:0001555!1.28e-10!155;UBERON:0007026!1.28e-10!155;UBERON:0005911!8.94e-10!82;UBERON:0000478!3.60e-09!24;UBERON:0000466!5.93e-09!126;UBERON:0000464!1.06e-08!104;UBERON:0001987!1.15e-08!4;UBERON:0004340!1.15e-08!4;UBERON:0000077!5.86e-08!130;UBERON:0005177!2.66e-07!107;UBERON:0000305!3.81e-07!7;UBERON:0004921!4.59e-07!129;UBERON:0004185!4.59e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.54e-18;10!UBERON:0000158;8.54e-18;10!UBERON:0000478;4.82e-17;24!UBERON:0001987;6.01e-16;4!UBERON:0000305;1.17e-13;7!UBERON:0002294;1.83e-08;7!UBERON:0001173;1.83e-08;7!UBERON:0000007;1.94e-08;2!UBERON:0002108;2.46e-07;4!UBERON:0005409;7.27e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.64e-31,14;UBERON:0000158,8.64e-31,14;UBERON:0003124,4.28e-19,7;UBERON:0000478,6.15e-17,24;UBERON:0001987,6.62e-16,4;UBERON:0004340,6.62e-16,4;UBERON:0000305,1.32e-13,7;UBERON:0004871,7.32e-12,8;UBERON:0000007,2.09e-08,2;UBERON:0004923,5.32e-08,66;UBERON:0002108,2.41e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,2.18441372130172,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,1.95157929807353,0.927708378250397,1.2781333715647,3.83545903556871,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,41.0906286938823,26.613071024941,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.4972015736749,21.6366071363646,11.7932214398575,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,7.21919380651859,4.00479752942957,0,0,1.47772280450026,0,0,0,0,0,0,1.52925763827023,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.978126775359,26.4298565941048,21.194088444847,0,0,0.111308705022906,0,0,0,0,2.77126022639704,0,0,0,2.96565558786179,0,0,0,0,0,0,0,0,1.82299432759663,0,0,0.568967241427498,4.83081935556256,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.217294743844016,14.6740533476683,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,5.28294471116642,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0.347119476670262,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.20238230377301,0.213452994739353,1.59847687665704,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0,0,0,0,0.803765742325096,1.10031549277787,0,0,0,0,0,0.0788057072991982,2.51782023047991,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75296524548339,0,1.88645166119599,0.414239055347196,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,6.55668868129634,11.0139981744227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,5.88886311006154,0,0.183428598521679,3.46576998451015,0,0,0,0,0,1.56302802246618,0.261906694481422,0,35.781172864525,0,0,0,0,0,0,0,0,1.27762427639595,0,0,3.03482802118316,3.41493287026946,2.12885688390333,0,0,0,0.0657727735628491,0,0,0,0,5.0448989396482,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6196181689645,0,0,7.60616936224988,3.33710794291826,0,0,0,0,0,0.233939463462106,1.39265542612958,0,0,0,1.05673990496671,0.0771741581079447,2.40415516554353,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0.109265571963696,0,0.305966489225945,0.534434810531121,1.01084389488329,0,0,0,0,0,0,1.66645102024618,0.193766729508018,0.186224142887574,0.224263725161227,0,0.404234377916439,0,0,0,0.358611026963382,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CLDN9 | |||
}} |
Latest revision as of 08:19, 16 September 2015
Short description: | p1@CLDN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN9_5end |
Coexpression cluster: | NA |
Association with transcript: | 459bp_to_ENST00000445369, NM_020982, uc010uwo.1_5end |
EntrezGene: | CLDN9 |
HGNC: | 2051 |
UniProt: | O95484 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.81e-18 | 19 |
placental epithelial cell | 1.03e-12 | 3 |
embryonic stem cell | 1.50e-11 | 5 |
epithelial cell | 4.91e-11 | 253 |
Merkel cell | 8.49e-09 | 2 |
amniotic epithelial cell | 3.63e-08 | 2 |
amnion mesenchymal stem cell | 8.56e-08 | 5 |
epithelial cell of gall bladder | 9.21e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.64e-31 | 14 |
membranous layer | 8.64e-31 | 14 |
chorion | 4.28e-19 | 7 |
extraembryonic structure | 6.15e-17 | 24 |
placenta | 6.62e-16 | 4 |
allantois | 6.62e-16 | 4 |
amnion | 1.32e-13 | 7 |
somatic layer of lateral plate mesoderm | 7.32e-12 | 8 |
pituitary gland | 2.09e-08 | 2 |
organ component layer | 5.32e-08 | 66 |
small intestine | 2.41e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.24e-14 | 106 |
adenocarcinoma | 8.53e-11 | 25 |
thoracic cancer | 2.51e-09 | 4 |
breast cancer | 2.51e-09 | 4 |
cell type cancer | 7.44e-09 | 143 |