FFCP PHASE1:Hg19::chr3:156009131..156009143,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=305bp_to_ENST00000302490_5end | |||
|cluster_id=chr3:156009131..156009143,+ | |||
|coexpression_cluster_id=C2130 | |||
|description=CAGE_peak_20_at_KCNAB1_5end | |||
|id=chr3:156009131..156009143,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;4.10e-23;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.87e-23;1!UBERON:0010122;1.65e-12;2!UBERON:0006601;2.12e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.20e-45!32;UBERON:0001893!1.01e-42!34;UBERON:0002780!3.98e-42!41;UBERON:0001890!3.98e-42!41;UBERON:0006240!3.98e-42!41;UBERON:0003080!5.25e-41!42;UBERON:0002791!7.01e-40!33;UBERON:0002020!1.36e-38!34;UBERON:0003528!1.36e-38!34;UBERON:0000955!3.40e-32!69;UBERON:0006238!3.40e-32!69;UBERON:0001049!1.79e-31!57;UBERON:0005068!1.79e-31!57;UBERON:0006241!1.79e-31!57;UBERON:0007135!1.79e-31!57;UBERON:0002616!3.23e-30!59;UBERON:0003056!4.76e-29!61;UBERON:0005743!6.69e-29!86;UBERON:0002619!7.54e-29!22;UBERON:0001017!1.97e-28!82;UBERON:0000073!1.55e-25!94;UBERON:0001016!1.55e-25!94;UBERON:0000956!3.93e-25!25;UBERON:0000203!3.93e-25!25;UBERON:0001950!5.29e-23!20;UBERON:0003075!1.10e-22!86;UBERON:0007284!1.10e-22!86;UBERON:0002346!2.14e-21!90;UBERON:0002420!8.81e-21!9;UBERON:0007245!8.81e-21!9;UBERON:0010009!8.81e-21!9;UBERON:0010011!8.81e-21!9;UBERON:0000454!8.81e-21!9;UBERON:0007023!3.99e-20!115;UBERON:0009663!7.42e-20!7;UBERON:0000033!4.43e-18!123;UBERON:0000153!6.35e-17!129;UBERON:0007811!6.35e-17!129;UBERON:0000369!2.14e-16!4;UBERON:0002435!2.14e-16!4;UBERON:0000204!2.14e-16!4;UBERON:0010082!2.14e-16!4;UBERON:0000025!2.49e-16!194;UBERON:0002308!2.75e-15!9;UBERON:0000125!2.75e-15!9;UBERON:0000200!3.15e-15!6;UBERON:0000349!3.34e-13!5;UBERON:0005383!1.29e-12!3;UBERON:0005382!1.29e-12!3;UBERON:0004111!1.64e-11!241;UBERON:0002771!1.66e-11!3;UBERON:0001871!2.08e-11!7;UBERON:0004121!2.72e-11!169;UBERON:0000924!7.04e-11!173;UBERON:0006601!7.04e-11!173;UBERON:0000477!6.98e-10!286;UBERON:0000483!2.92e-09!309;UBERON:0000119!4.34e-09!312;UBERON:0001954!5.95e-09!2;UBERON:0003022!5.95e-09!2;UBERON:0002421!5.95e-09!2;UBERON:0002600!5.95e-09!2;UBERON:0001873!7.22e-09!2;UBERON:0010122!7.22e-09!2;UBERON:0001875!1.28e-08!2;UBERON:0006514!1.28e-08!2;UBERON:0002021!2.92e-07!5;UBERON:0001637!5.73e-07!42;UBERON:0003509!5.73e-07!42;UBERON:0004572!5.73e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;8.89e-61;9!UBERON:0007245;8.89e-61;9!UBERON:0010009;8.89e-61;9!UBERON:0010011;8.89e-61;9!UBERON:0000454;8.89e-61;9!UBERON:0009663;2.06e-50;7!UBERON:0000369;4.75e-50;4!UBERON:0002435;4.75e-50;4!UBERON:0000204;4.75e-50;4!UBERON:0000125;2.30e-39;9!UBERON:0002308;2.30e-39;9!UBERON:0005383;2.67e-30;3!UBERON:0005382;2.67e-30;3!UBERON:0002791;9.61e-25;32!UBERON:0001882;1.87e-23;1!UBERON:0005403;1.87e-23;1!UBERON:0001869;2.49e-23;32!UBERON:0001874;4.10e-23;1!UBERON:0003528;1.67e-20;34!UBERON:0002020;1.67e-20;34!UBERON:0001893;2.37e-20;34!UBERON:0002780;2.44e-19;41!UBERON:0001890;2.44e-19;41!UBERON:0000349;1.41e-18;5!UBERON:0000955;6.78e-14;68!UBERON:0001873;1.65e-12;2!UBERON:0001876;2.90e-12;2!UBERON:0001875;2.90e-12;2!UBERON:0006514;2.90e-12;2!UBERON:0001017;1.43e-11;75!UBERON:0000073;1.97e-10;53!UBERON:0002616;1.97e-10;53!UBERON:0001016;2.79e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,5.76e-61,9;UBERON:0007245,5.76e-61,9;UBERON:0010009,5.76e-61,9;UBERON:0010011,5.76e-61,9;UBERON:0000454,5.76e-61,9;UBERON:0009663,1.70e-50,7;UBERON:0000369,3.69e-50,4;UBERON:0002435,3.69e-50,4;UBERON:0000204,3.69e-50,4;UBERON:0010082,3.69e-50,4;UBERON:0000125,1.98e-39,9;UBERON:0002308,1.98e-39,9;UBERON:0005383,2.30e-30,3;UBERON:0005382,2.30e-30,3;UBERON:0002780,1.68e-25,41;UBERON:0001890,1.68e-25,41;UBERON:0003080,1.68e-25,41;UBERON:0006240,1.68e-25,41;UBERON:0002791,5.92e-24,32;UBERON:0001869,5.92e-24,32;UBERON:0001882,1.67e-23,1;UBERON:0005403,1.67e-23,1;UBERON:0001874,3.28e-23,1;UBERON:0003528,1.36e-22,34;UBERON:0002020,1.36e-22,34;UBERON:0001893,1.36e-22,34;UBERON:0000955,5.86e-20,68;UBERON:0006238,5.86e-20,68;UBERON:0000073,7.71e-20,53;UBERON:0002616,7.71e-20,53;UBERON:0001049,8.55e-19,56;UBERON:0005068,8.55e-19,56;UBERON:0006241,8.55e-19,56;UBERON:0007135,8.55e-19,56;UBERON:0000349,1.13e-18,5;UBERON:0003056,2.82e-17,61;UBERON:0001017,8.16e-17,81;UBERON:0001016,3.72e-15,89;UBERON:0003075,6.94e-13,82;UBERON:0007284,6.94e-13,82;UBERON:0001873,1.65e-12,2;UBERON:0010122,1.65e-12,2;UBERON:0001876,2.32e-12,2;UBERON:0002346,2.75e-12,86;UBERON:0001875,2.90e-12,2;UBERON:0006514,2.90e-12,2;UBERON:0010371,3.73e-10,104;UBERON:0007023,2.44e-09,114;UBERON:0010314,5.66e-08,132;UBERON:0004121,6.83e-08,171;UBERON:0000924,6.83e-08,171;UBERON:0006601,6.83e-08,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,5.98841394003583,0,0,0,0,0,0,0,0,0,3.54296554325536,0.482385754501632,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.376481328569,0,0,1.23069818544453,0.504143392443436,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,1.88538707899202,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p20@KCNAB1 | |||
}} |
Latest revision as of 06:07, 16 September 2015
Short description: | p20@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_KCNAB1_5end |
Coexpression cluster: | C2130_brain_putamen_temporal_diencephalon_caudate_amygdala_occipital |
Association with transcript: | 305bp_to_ENST00000302490_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data