FFCP PHASE1:Hg19::chr5:150019938..150019967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11346 | |EntrezGene=11346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30672 | |HGNC=30672 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3V7 | |UniProt=Q8N3V7 | ||
|association_with_transcript=-239bp_to_NM_001109974,NM_007286_5end | |association_with_transcript=-239bp_to_NM_001109974,NM_007286_5end | ||
|cluster_id=chr5:150019938..150019967,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_14_at_SYNPO_5end | |description=CAGE_peak_14_at_SYNPO_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.26e-20!24;CL:0000115!3.77e-18!35;CL:0000222!1.27e-17!119;CL:0002078!6.87e-17!44;CL:0000071!1.03e-16!18;CL:0002546!1.03e-16!18;CL:0000213!7.04e-16!57;CL:0000215!7.04e-16!57;CL:0000220!1.33e-14!246;CL:0002321!1.69e-14!248;CL:1000413!2.63e-09!9;CL:0000076!2.12e-07!62;CL:0000066!7.04e-07!254 | |ontology_enrichment_celltype=CL:0002139!1.26e-20!24;CL:0000115!3.77e-18!35;CL:0000222!1.27e-17!119;CL:0002078!6.87e-17!44;CL:0000071!1.03e-16!18;CL:0002546!1.03e-16!18;CL:0000213!7.04e-16!57;CL:0000215!7.04e-16!57;CL:0000220!1.33e-14!246;CL:0002321!1.69e-14!248;CL:1000413!2.63e-09!9;CL:0000076!2.12e-07!62;CL:0000066!7.04e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.13e-44;24!CL:0000071;1.98e-38;18!CL:0000115;2.16e-38;36!CL:0002078;2.59e-25;45!CL:0000213;5.46e-25;58!CL:0000215;5.46e-25;58!CL:1000413;2.54e-20;9!CL:0002544;5.57e-14;6!CL:0002543;1.08e-13;6!CL:0000076;4.96e-09;63!CL:0002138;4.11e-08;6!CL:0002188;5.50e-08;5!CL:0002144;1.15e-07;3!CL:0002618;2.00e-07;3!CL:0000064;4.13e-07;3!CL:0000067;4.13e-07;3!CL:0005012;4.13e-07;3!CL:0002304;4.13e-07;3 | |ontology_enrichment_celltype_v019=CL:0002139;2.13e-44;24!CL:0000071;1.98e-38;18!CL:0000115;2.16e-38;36!CL:0002078;2.59e-25;45!CL:0000213;5.46e-25;58!CL:0000215;5.46e-25;58!CL:1000413;2.54e-20;9!CL:0002544;5.57e-14;6!CL:0002543;1.08e-13;6!CL:0000076;4.96e-09;63!CL:0002138;4.11e-08;6!CL:0002188;5.50e-08;5!CL:0002144;1.15e-07;3!CL:0002618;2.00e-07;3!CL:0000064;4.13e-07;3!CL:0000067;4.13e-07;3!CL:0005012;4.13e-07;3!CL:0002304;4.13e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.05e-46,36;CL:0002139,1.97e-44,24;CL:0000213,4.44e-42,58;CL:0000215,4.44e-42,58;CL:0002078,1.71e-40,45;CL:0000071,2.31e-38,18;CL:0002546,2.31e-38,18;CL:0000222,1.31e-28,121;CL:1000413,2.55e-20,9;CL:0002321,2.50e-16,250;CL:0000076,8.77e-15,63;CL:0002544,5.42e-14,6;CL:0002543,1.15e-13,6;CL:0005020,3.45e-08,6;CL:0002138,3.45e-08,6;CL:0005022,3.45e-08,6;CL:0002188,5.45e-08,5;CL:0000066,8.77e-08,253;CL:0002144,1.26e-07,3;CL:0002618,2.10e-07,3;CL:0000064,4.11e-07,3;CL:0000067,4.11e-07,3;CL:0005012,4.11e-07,3;CL:0002304,4.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.98e-38;18!CL:0000222;2.10e-09;121!CL:0005022;4.11e-08;6 | |ontology_enrichment_development_v019=CL:0002546;1.98e-38;18!CL:0000222;2.10e-09;121!CL:0005022;4.11e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.71e-28!79;UBERON:0007798!6.71e-28!79;UBERON:0000055!1.08e-26!69;UBERON:0001981!1.41e-23!60;UBERON:0007500!1.41e-23!60;UBERON:0004537!1.41e-23!60;UBERON:0006965!1.41e-23!60;UBERON:0004872!2.76e-21!84;UBERON:0000477!6.55e-20!286;UBERON:0004535!1.54e-19!110;UBERON:0004111!7.00e-19!241;UBERON:0001009!7.56e-19!113;UBERON:0000119!7.75e-19!312;UBERON:0000483!1.06e-17!309;UBERON:0000025!3.12e-17!194;UBERON:0003914!6.12e-17!118;UBERON:0001986!1.03e-16!18;UBERON:0004638!1.03e-16!18;UBERON:0004852!1.03e-16!18;UBERON:0001637!8.99e-16!42;UBERON:0003509!8.99e-16!42;UBERON:0004572!8.99e-16!42;UBERON:0000487!2.09e-13!22;UBERON:0006914!2.59e-12!25;UBERON:0000490!3.35e-12!138;UBERON:0004573!9.64e-12!33;UBERON:0004571!9.64e-12!33;UBERON:0000481!1.58e-11!347;UBERON:0000467!1.63e-09!625;UBERON:0000480!2.19e-09!626;UBERON:0003915!2.63e-09!9;UBERON:0004700!2.63e-09!9;UBERON:0001917!2.63e-09!9;UBERON:0000468!6.35e-09!659;UBERON:0000475!1.13e-08!365;UBERON:0000947!1.62e-08!21;UBERON:0010191!1.62e-08!21;UBERON:0007625!4.37e-07!11;UBERON:0000923!6.61e-07!604;UBERON:0005291!6.61e-07!604;UBERON:0006598!6.61e-07!604;UBERON:0002532!6.61e-07!604;UBERON:0000922!7.31e-07!612;UBERON:0002050!8.48e-07!605;UBERON:0005423!8.48e-07!605 | |ontology_enrichment_uberon=UBERON:0002049!6.71e-28!79;UBERON:0007798!6.71e-28!79;UBERON:0000055!1.08e-26!69;UBERON:0001981!1.41e-23!60;UBERON:0007500!1.41e-23!60;UBERON:0004537!1.41e-23!60;UBERON:0006965!1.41e-23!60;UBERON:0004872!2.76e-21!84;UBERON:0000477!6.55e-20!286;UBERON:0004535!1.54e-19!110;UBERON:0004111!7.00e-19!241;UBERON:0001009!7.56e-19!113;UBERON:0000119!7.75e-19!312;UBERON:0000483!1.06e-17!309;UBERON:0000025!3.12e-17!194;UBERON:0003914!6.12e-17!118;UBERON:0001986!1.03e-16!18;UBERON:0004638!1.03e-16!18;UBERON:0004852!1.03e-16!18;UBERON:0001637!8.99e-16!42;UBERON:0003509!8.99e-16!42;UBERON:0004572!8.99e-16!42;UBERON:0000487!2.09e-13!22;UBERON:0006914!2.59e-12!25;UBERON:0000490!3.35e-12!138;UBERON:0004573!9.64e-12!33;UBERON:0004571!9.64e-12!33;UBERON:0000481!1.58e-11!347;UBERON:0000467!1.63e-09!625;UBERON:0000480!2.19e-09!626;UBERON:0003915!2.63e-09!9;UBERON:0004700!2.63e-09!9;UBERON:0001917!2.63e-09!9;UBERON:0000468!6.35e-09!659;UBERON:0000475!1.13e-08!365;UBERON:0000947!1.62e-08!21;UBERON:0010191!1.62e-08!21;UBERON:0007625!4.37e-07!11;UBERON:0000923!6.61e-07!604;UBERON:0005291!6.61e-07!604;UBERON:0006598!6.61e-07!604;UBERON:0002532!6.61e-07!604;UBERON:0000922!7.31e-07!612;UBERON:0002050!8.48e-07!605;UBERON:0005423!8.48e-07!605 | ||
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| ||
|short_description=p14@SYNPO | |short_description=p14@SYNPO | ||
}} | }} |
Latest revision as of 05:27, 16 September 2015
Short description: | p14@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SYNPO_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -239bp_to_NM_001109974, NM_007286_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | Q8N3V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.05e-46 | 36 |
endothelial cell of vascular tree | 1.97e-44 | 24 |
lining cell | 4.44e-42 | 58 |
barrier cell | 4.44e-42 | 58 |
meso-epithelial cell | 1.71e-40 | 45 |
blood vessel endothelial cell | 2.31e-38 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.31e-38 | 18 |
mesodermal cell | 1.31e-28 | 121 |
endothelial cell of artery | 2.55e-20 | 9 |
embryonic cell | 2.50e-16 | 250 |
squamous epithelial cell | 8.77e-15 | 63 |
aortic endothelial cell | 5.42e-14 | 6 |
vein endothelial cell | 1.15e-13 | 6 |
lymphangioblast | 3.45e-08 | 6 |
endothelial cell of lymphatic vessel | 3.45e-08 | 6 |
vascular lymphangioblast | 3.45e-08 | 6 |
glomerular endothelial cell | 5.45e-08 | 5 |
epithelial cell | 8.77e-08 | 253 |
capillary endothelial cell | 1.26e-07 | 3 |
endothelial cell of umbilical vein | 2.10e-07 | 3 |
ciliated cell | 4.11e-07 | 3 |
ciliated epithelial cell | 4.11e-07 | 3 |
multi-ciliated epithelial cell | 4.11e-07 | 3 |
non-pigmented ciliary epithelial cell | 4.11e-07 | 3 |