FFCP PHASE1:Hg19::chr19:1446310..1446318,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:1446310..1446318,+
|short_description=p5@APC2
|description=CAGE_peak_5_at_APC2_5end
|association_with_transcript=1bp_to_AF110334,AL078616_5end
|EntrezGen...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10297 | |EntrezGene=10297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24036 | |HGNC=24036 | ||
|TSSclassifier=strong | |||
|UniProt=O95996 | |UniProt=O95996 | ||
|association_with_transcript=1bp_to_AF110334,AL078616_5end | |||
|cluster_id=chr19:1446310..1446318,+ | |||
|coexpression_cluster_id=C1126 | |||
|description=CAGE_peak_5_at_APC2_5end | |||
|id=chr19:1446310..1446318,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.50e-54;3!UBERON:0006222;2.97e-19;1!UBERON:0006601;3.17e-09;82!UBERON:0006241;2.71e-07;3!UBERON:0003057;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.42e-82!57;UBERON:0005068!8.42e-82!57;UBERON:0006241!8.42e-82!57;UBERON:0007135!8.42e-82!57;UBERON:0001017!1.17e-76!82;UBERON:0000073!3.40e-74!94;UBERON:0001016!3.40e-74!94;UBERON:0005743!1.13e-72!86;UBERON:0000955!6.51e-72!69;UBERON:0006238!6.51e-72!69;UBERON:0002616!5.11e-70!59;UBERON:0003075!5.40e-57!86;UBERON:0007284!5.40e-57!86;UBERON:0002780!2.05e-56!41;UBERON:0001890!2.05e-56!41;UBERON:0006240!2.05e-56!41;UBERON:0003080!6.31e-55!42;UBERON:0002346!4.93e-54!90;UBERON:0002020!1.12e-49!34;UBERON:0003528!1.12e-49!34;UBERON:0001893!1.51e-49!34;UBERON:0002791!9.72e-47!33;UBERON:0001869!4.40e-44!32;UBERON:0004121!1.60e-40!169;UBERON:0000924!2.46e-39!173;UBERON:0006601!2.46e-39!173;UBERON:0003056!1.50e-38!61;UBERON:0002619!3.62e-38!22;UBERON:0001950!1.80e-37!20;UBERON:0000033!2.18e-36!123;UBERON:0007023!3.31e-36!115;UBERON:0000153!2.99e-34!129;UBERON:0007811!2.99e-34!129;UBERON:0000956!2.96e-33!25;UBERON:0000203!2.96e-33!25;UBERON:0003076!3.52e-27!15;UBERON:0003057!3.52e-27!15;UBERON:0004733!4.39e-23!12;UBERON:0002028!4.39e-23!12;UBERON:0007277!4.39e-23!12;UBERON:0004732!3.65e-21!13;UBERON:0002298!8.55e-21!8;UBERON:0000200!7.53e-20!6;UBERON:0002308!5.30e-18!9;UBERON:0000125!5.30e-18!9;UBERON:0002420!7.22e-18!9;UBERON:0007245!7.22e-18!9;UBERON:0010009!7.22e-18!9;UBERON:0010011!7.22e-18!9;UBERON:0000454!7.22e-18!9;UBERON:0000025!2.20e-17!194;UBERON:0001871!1.39e-14!7;UBERON:0002680!2.49e-14!9;UBERON:0001895!2.49e-14!9;UBERON:0010092!2.49e-14!9;UBERON:0004111!3.67e-12!241;UBERON:0009663!5.11e-12!7;UBERON:0000988!1.09e-11!3;UBERON:0001896!2.97e-11!3;UBERON:0005290!2.97e-11!3;UBERON:0010096!2.97e-11!3;UBERON:0006331!5.89e-11!3;UBERON:0000349!6.27e-11!5;UBERON:0002021!1.11e-10!5;UBERON:0002771!3.20e-10!3;UBERON:0000064!1.73e-09!219;UBERON:0000483!1.76e-09!309;UBERON:0000119!2.69e-09!312;UBERON:0000475!5.28e-09!365;UBERON:0000477!8.17e-09!286;UBERON:0001894!2.88e-08!7;UBERON:0006222!2.88e-08!7;UBERON:0002148!3.20e-08!2;UBERON:0009662!3.20e-08!2;UBERON:0000369!3.22e-08!4;UBERON:0002435!3.22e-08!4;UBERON:0000204!3.22e-08!4;UBERON:0010082!3.22e-08!4;UBERON:0001870!3.44e-08!2;UBERON:0001897!4.54e-08!2;UBERON:0001876!4.87e-08!2;UBERON:0001872!6.35e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;9.92e-54;12!UBERON:0002028;9.92e-54;12!UBERON:0002680;4.59e-50;9!UBERON:0001895;4.59e-50;9!UBERON:0004732;1.31e-49;13!UBERON:0002037;1.02e-27;6!UBERON:0002298;1.17e-27;6!UBERON:0000988;4.31e-25;3!UBERON:0000073;5.05e-18;53!UBERON:0002616;5.05e-18;53!UBERON:0000955;3.76e-14;68!UBERON:0001017;1.40e-12;75!UBERON:0001016;2.10e-12;83!UBERON:0001894;2.42e-11;7!UBERON:0001897;1.64e-10;2!UBERON:0010225;1.64e-10;2!UBERON:0001876;2.60e-10;2!UBERON:0002148;2.60e-10;2!UBERON:0001875;2.60e-10;2!UBERON:0006331;2.60e-10;2!UBERON:0009662;2.60e-10;2!UBERON:0006514;2.60e-10;2!UBERON:0007023;2.45e-09;114!UBERON:0002420;6.10e-09;9!UBERON:0000125;6.10e-09;9!UBERON:0007245;6.10e-09;9!UBERON:0002308;6.10e-09;9!UBERON:0010009;6.10e-09;9!UBERON:0010011;6.10e-09;9!UBERON:0000454;6.10e-09;9!UBERON:0001896;2.71e-07;3!UBERON:0002240;2.71e-07;3!UBERON:0005174;2.71e-07;3!UBERON:0005290;2.71e-07;3!UBERON:0001137;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.65e-58,15;UBERON:0003057,3.65e-58,15;UBERON:0004733,9.50e-54,12;UBERON:0002028,9.50e-54,12;UBERON:0007277,9.50e-54,12;UBERON:0002680,5.09e-50,9;UBERON:0001895,5.09e-50,9;UBERON:0010092,5.09e-50,9;UBERON:0004732,1.25e-49,13;UBERON:0001049,1.74e-37,56;UBERON:0005068,1.74e-37,56;UBERON:0006241,1.74e-37,56;UBERON:0007135,1.74e-37,56;UBERON:0000073,9.99e-33,53;UBERON:0002616,9.99e-33,53;UBERON:0002037,1.02e-27,6;UBERON:0006215,1.02e-27,6;UBERON:0002298,1.12e-27,6;UBERON:0001017,1.34e-25,81;UBERON:0003075,1.34e-25,82;UBERON:0007284,1.34e-25,82;UBERON:0000955,3.84e-25,68;UBERON:0006238,3.84e-25,68;UBERON:0000988,4.87e-25,3;UBERON:0002346,2.13e-24,86;UBERON:0001016,4.81e-23,89;UBERON:0010371,4.01e-20,104;UBERON:0007023,1.73e-18,114;UBERON:0010314,9.24e-16,132;UBERON:0004121,6.88e-12,171;UBERON:0000924,6.88e-12,171;UBERON:0006601,6.88e-12,171;UBERON:0001894,2.98e-11,7;UBERON:0006222,2.98e-11,7;UBERON:0000025,1.20e-10,192;UBERON:0001897,1.72e-10,2;UBERON:0010225,1.72e-10,2;UBERON:0001876,1.89e-10,2;UBERON:0001875,2.07e-10,2;UBERON:0006514,2.07e-10,2;UBERON:0002148,2.99e-10,2;UBERON:0006331,2.99e-10,2;UBERON:0009662,2.99e-10,2;UBERON:0002420,4.80e-09,9;UBERON:0007245,4.80e-09,9;UBERON:0010009,4.80e-09,9;UBERON:0010011,4.80e-09,9;UBERON:0000454,4.80e-09,9;UBERON:0000125,5.87e-09,9;UBERON:0002308,5.87e-09,9;UBERON:0011216,6.17e-09,223;UBERON:0004111,2.27e-08,240;UBERON:0001896,2.47e-07,3;UBERON:0005290,2.47e-07,3;UBERON:0010096,2.47e-07,3;UBERON:0002240,3.16e-07,3;UBERON:0005174,3.16e-07,3;UBERON:0001137,3.16e-07,3;UBERON:0002780,3.25e-07,41;UBERON:0001890,3.25e-07,41;UBERON:0003080,3.25e-07,41;UBERON:0006240,3.25e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,1.9882952955326,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0.723578631752448,3.05163472634166,1.65868889896837,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,1.1713222286267,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.625954653532499,1.72022758707021,0.554645257684261,0.496771223531068,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.504143392443436,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.697573912132975,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,2.58284985311961,0.986591603442736,0,0,0,0.471346769748006,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.611923411718232,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,2.48750831837634,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,1.9882952955326,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0.723578631752448,3.05163472634166,1.65868889896837,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,1.1713222286267,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.625954653532499,1.72022758707021,0.554645257684261,0.496771223531068,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0.504143392443436,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.697573912132975,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,2.58284985311961,0.986591603442736,0,0,0,0.471346769748006,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.611923411718232,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,2.48750831837634,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@APC2 | |||
}} | }} |
Latest revision as of 04:18, 16 September 2015
Short description: | p5@APC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APC2_5end |
Coexpression cluster: | C1126_thalamus_cerebellum_amygdala_locus_pons_spinal_medulla |
Association with transcript: | 1bp_to_AF110334, AL078616_5end |
EntrezGene: | APC2 |
HGNC: | 24036 |
UniProt: | O95996 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data