FFCP PHASE1:Hg19::chr12:96337080..96337093,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144193 | |EntrezGene=144193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28577 | |HGNC=28577 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NU7,B3KVC5 | |UniProt=Q96NU7,B3KVC5 | ||
|association_with_transcript=9bp_to_ENST00000266736,NM_152435,uc001tel.1,uc009zth.1_5end | |association_with_transcript=9bp_to_ENST00000266736,NM_152435,uc001tel.1,uc009zth.1_5end | ||
|cluster_id=chr12:96337080..96337093,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_AMDHD1_5end | |description=CAGE_peak_3_at_AMDHD1_5end | ||
|id=chr12:96337080..96337093,+ | |id=chr12:96337080..96337093,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.69e-19;12!CL:0000235;1.35e-10;6!CL:0002032;1.14e-07;1!CL:0000557;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.23e-19,12;CL:0000235,1.45e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.25e-15;11!UBERON:0001041;9.24e-13;30!UBERON:0009497;1.84e-12;13!UBERON:0003104;4.21e-07;31 | |||
|ontology_enrichment_disease=DOID:305!3.17e-10!106;DOID:0050687!3.28e-07!143 | |ontology_enrichment_disease=DOID:305!3.17e-10!106;DOID:0050687!3.28e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.14e-07;1!DOID:0070004;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.26e-07,1;DOID:0070004,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000077!2.13e-09!130;UBERON:0001007!6.28e-09!155;UBERON:0001555!6.28e-09!155;UBERON:0007026!6.28e-09!155;UBERON:0004119!2.82e-08!169;UBERON:0000925!2.82e-08!169;UBERON:0006595!2.82e-08!169;UBERON:0004921!1.03e-07!129;UBERON:0004185!1.03e-07!129;UBERON:0000949!4.46e-07!45 | |ontology_enrichment_uberon=UBERON:0000077!2.13e-09!130;UBERON:0001007!6.28e-09!155;UBERON:0001555!6.28e-09!155;UBERON:0007026!6.28e-09!155;UBERON:0004119!2.82e-08!169;UBERON:0000925!2.82e-08!169;UBERON:0006595!2.82e-08!169;UBERON:0004921!1.03e-07!129;UBERON:0004185!1.03e-07!129;UBERON:0000949!4.46e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.43e-21;19!UBERON:0006925;2.43e-21;19!UBERON:0002368;3.54e-16;33!UBERON:0002423;6.09e-16;25!UBERON:0000949;3.45e-13;43!UBERON:0002365;3.47e-12;31!UBERON:0002330;3.47e-12;31!UBERON:0002371;9.73e-09;12!UBERON:0007195;1.14e-07;1!UBERON:0003296;2.93e-07;4!UBERON:0010133;2.93e-07;4!UBERON:0002390;9.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.81e-21,19;UBERON:0006925,1.81e-21,19;UBERON:0008836,1.81e-21,19;UBERON:0008835,2.20e-18,22;UBERON:0003894,2.20e-18,22;UBERON:0009854,1.56e-17,23;UBERON:0002368,3.81e-17,35;UBERON:0007499,4.89e-16,25;UBERON:0009497,4.89e-16,25;UBERON:0000015,4.89e-16,25;UBERON:0002423,4.89e-16,25;UBERON:0006235,4.89e-16,25;UBERON:0004161,4.89e-16,25;UBERON:0000949,1.02e-15,45;UBERON:0009856,2.24e-15,26;UBERON:0002365,1.05e-12,31;UBERON:0002330,1.05e-12,31;UBERON:0002530,1.83e-09,59;UBERON:0001041,1.26e-08,87;UBERON:0005172,1.65e-08,54;UBERON:0005173,1.65e-08,54;UBERON:0005177,1.79e-08,101;UBERON:0005911,9.04e-08,82;UBERON:0007195,1.54e-07,1;UBERON:0002417,1.63e-07,60;UBERON:0000916,1.63e-07,60;UBERON:0003296,3.55e-07,4;UBERON:0010133,3.55e-07,4;UBERON:0003929,8.59e-07,54 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0.284338464974843,0.293600439334847,0,0.200544447470142,0.217010870715852,1.56740831967947,0.647787332037959,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0.336985893439485,0.150176892841506,0.32145117339416,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0.263504357079378,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.723033089650446,0.330881918197182,0.871517776369625,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,19.0132552232746,14.7424082501644,14.1789577603537,0.441463099414651,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0.468008530278475,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.414656231081544,0.144119953416961,0.25248486685276,0.253991577168676,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,3.51579964002488,2.10833939483032,0,0,0,0,0,0.358121926479791,0.896681151948218,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0.492762936082855,0.519254429183621,0,0.120859449591622,0.200506470303285,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59462474545423,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,6.02520324971387,0,0,0,0,0,0.764637207142375,0,0,0,0,1.62009431171434,0,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0.711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.586164286206121,1.9488432172667,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,1.0077309914171,0,0.123084805461069,0,0.179736702294654,0,0,0.197286811273867,0,1.11136990144637,0.969332746095218,0,0,0,0,0,0.227586896570999,0,1.18193840883968,0,0.291604613383254,0.347249989866585,0,0.241192877250816,0,0,0,0.219385397153973,1.41620002574687,0,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0.432777279484182,0,0.265372693510018,0.611030144933625,1.18608451472249,0.370691816839509,0.835375596043643,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.126373159256976,0,0.103688191397247,0.664653872707185,0.661983911750998,0.941798755221676,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0.0870592065804026,0,0,0.483781656445426,0.511625219603299,0.328461828212837,0,0,0,0,0,0,0.977756913674015,0.240476460754601,0,0.19980960958213,0.432271251462318,1.03082936549324,0.514784993585894,0.14405479798815,0.621262677827163,0.471388069233591,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0.199679000498991,0.429226048136571,0.669514372325618,0.134366944973453,0,0,1.89079637537337,2.14281231791033,1.48287796479207,0.295282444544246,0,0,0,0.321506296930038,0,0,0,0,0.121499113316049,0,1.02447419488958,0.577000469484979,0,5.91648219798388,0.767660789277781,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0.170388021785422,0,11.7241786942466,2.65013777824443,0,0,1.36869470307464,0,0.320362237703084,0,0.414239055347196,0,0.592834895693833,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0.758245587708239,0,0,0,0,0,0,0,0,0.251567901752575,2.66943366478961,0.457680136793847,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,1.20550485762571,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0.495743057036009,0,0,0.0788617450012534,0,0,0,0.0642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| ||
|short_description=p3@AMDHD1 | |short_description=p3@AMDHD1 | ||
}} | }} |
Latest revision as of 03:07, 16 September 2015
Short description: | p3@AMDHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMDHD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 9bp_to_ENST00000266736, NM_152435, uc001tel.1, uc009zth.1_5end |
EntrezGene: | AMDHD1 |
HGNC: | 28577 |
UniProt: | Q96NU7B3KVC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.23e-19 | 12 |
macrophage | 1.45e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 1.81e-21 | 19 |
digestive gland | 1.81e-21 | 19 |
liver bud | 1.81e-21 | 19 |
hepatic diverticulum | 2.20e-18 | 22 |
liver primordium | 2.20e-18 | 22 |
digestive tract diverticulum | 1.56e-17 | 23 |
endocrine gland | 3.81e-17 | 35 |
epithelial sac | 4.89e-16 | 25 |
epithelium of foregut-midgut junction | 4.89e-16 | 25 |
anatomical boundary | 4.89e-16 | 25 |
hepatobiliary system | 4.89e-16 | 25 |
foregut-midgut junction | 4.89e-16 | 25 |
septum transversum | 4.89e-16 | 25 |
endocrine system | 1.02e-15 | 45 |
sac | 2.24e-15 | 26 |
exocrine gland | 1.05e-12 | 31 |
exocrine system | 1.05e-12 | 31 |
gland | 1.83e-09 | 59 |
foregut | 1.26e-08 | 87 |
abdomen element | 1.65e-08 | 54 |
abdominal segment element | 1.65e-08 | 54 |
trunk region element | 1.79e-08 | 101 |
endo-epithelium | 9.04e-08 | 82 |
stroma of bone marrow | 1.54e-07 | 1 |
abdominal segment of trunk | 1.63e-07 | 60 |
abdomen | 1.63e-07 | 60 |
gland of diencephalon | 3.55e-07 | 4 |
neuroendocrine gland | 3.55e-07 | 4 |
gut epithelium | 8.59e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.26e-07 | 1 |
myeloma | 1.26e-07 | 1 |