FFCP PHASE1:Hg19::chr11:118272301..118272312,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118272301..118272312,+ to FFCP PHASE1:Hg19::chr11:118272301..118272312,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10632 | |EntrezGene=10632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14247 | |HGNC=14247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000529790_5end | |||
|cluster_id=chr11:118272301..118272312,+ | |||
|description=CAGE_peak_3_at_ATP5L_5end | |||
|id=chr11:118272301..118272312,+ | |||
|ontology_enrichment_celltype=CL:0000012!9.38e-25!682;CL:0000548!2.23e-24!679;CL:0000004!2.23e-24!679;CL:0000255!2.23e-24!679;CL:0000144!6.54e-16!625;CL:0000003!1.45e-15!722;CL:0000222!2.85e-15!119;CL:0002321!3.29e-13!248;CL:0002371!4.64e-13!591;CL:0000220!5.93e-13!246;CL:0000183!6.59e-13!59;CL:0000192!1.70e-11!42;CL:0000514!1.70e-11!42;CL:0000393!1.84e-11!60;CL:0000211!1.84e-11!60;CL:0000066!9.45e-11!254;CL:0000187!1.52e-10!54;CL:0000680!4.35e-10!57;CL:0000056!4.35e-10!57;CL:0000355!4.35e-10!57;CL:0000359!9.73e-09!32;CL:0000055!3.06e-08!180;CL:0000063!1.49e-07!578;CL:1000449!4.06e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.12e-08;32!CL:1000449;3.15e-08;15!CL:0000192;8.72e-08;43!CL:1000497;1.41e-07;17!CL:0002518;1.41e-07;17!CL:0002681;2.30e-07;12!CL:0002584;2.30e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.33e-15,121;CL:0002321,3.07e-13,250;CL:0000066,5.00e-11,253;CL:0000393,7.45e-11,61;CL:0000211,7.45e-11,61;CL:0000192,9.67e-11,43;CL:0000514,9.67e-11,43;CL:0000187,6.17e-10,55;CL:0000680,1.62e-09,58;CL:0000056,1.62e-09,58;CL:0000355,1.62e-09,58;CL:0000359,9.73e-09,32;CL:1000449,3.24e-08,15;CL:1000497,1.33e-07,17;CL:0002518,1.33e-07,17;CL:0002681,2.41e-07,12;CL:0002584,2.41e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;8.72e-08;43 | |||
|ontology_enrichment_disease=DOID:2531!3.52e-10!51;DOID:0060083!3.52e-10!51;DOID:1240!1.33e-07!39;DOID:14566!1.99e-07!239;DOID:0050686!2.52e-07!137;DOID:162!2.53e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.52e-10,51;DOID:0060083,3.52e-10,51;DOID:1240,1.33e-07,39;DOID:14566,1.99e-07,239;DOID:0050686,2.52e-07,137;DOID:162,2.53e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.99e-10!83;UBERON:0002329!1.99e-10!83;UBERON:0003077!1.99e-10!83;UBERON:0003059!1.99e-10!83;UBERON:0007282!1.99e-10!83;UBERON:0009618!1.99e-10!83;UBERON:0007285!1.99e-10!83;UBERON:0005256!2.28e-10!143;UBERON:0004290!2.94e-10!70;UBERON:0003914!5.16e-10!118;UBERON:0002049!8.36e-10!79;UBERON:0007798!8.36e-10!79;UBERON:0000486!1.03e-09!82;UBERON:0000055!1.44e-09!69;UBERON:0003104!1.65e-09!238;UBERON:0009142!1.65e-09!238;UBERON:0001134!6.28e-09!61;UBERON:0002036!6.28e-09!61;UBERON:0003082!6.28e-09!61;UBERON:0000490!9.93e-09!138;UBERON:0002385!4.62e-08!63;UBERON:0001015!4.62e-08!63;UBERON:0000383!4.62e-08!63;UBERON:0001981!4.91e-08!60;UBERON:0007500!4.91e-08!60;UBERON:0004537!4.91e-08!60;UBERON:0006965!4.91e-08!60;UBERON:0001637!1.47e-07!42;UBERON:0003509!1.47e-07!42;UBERON:0004572!1.47e-07!42;UBERON:0002100!1.99e-07!216;UBERON:0004872!2.32e-07!84;UBERON:0004211!4.06e-07!16;UBERON:0001285!4.06e-07!16;UBERON:0007684!4.06e-07!16;UBERON:0003220!4.06e-07!16;UBERON:0004208!4.06e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.15e-08;15!UBERON:0004819;3.15e-08;15!UBERON:0001285;3.15e-08;15!UBERON:0007684;3.15e-08;15!UBERON:0000353;1.86e-07;15!UBERON:0001225;2.30e-07;12!UBERON:0008987;2.30e-07;12!UBERON:0003914;4.16e-07;74!UBERON:0001851;5.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.75e-12,78;UBERON:0003914,2.11e-10,117;UBERON:0002049,5.37e-10,78;UBERON:0007798,5.37e-10,78;UBERON:0000055,8.89e-10,68;UBERON:0002329,9.58e-10,71;UBERON:0003059,9.58e-10,71;UBERON:0007282,9.58e-10,71;UBERON:0004290,9.58e-10,71;UBERON:0009618,9.58e-10,71;UBERON:0000490,1.23e-09,148;UBERON:0007524,1.74e-09,73;UBERON:0003077,2.68e-09,72;UBERON:0007285,2.68e-09,72;UBERON:0000486,2.90e-09,83;UBERON:0003104,3.63e-09,160;UBERON:0009142,3.63e-09,160;UBERON:0001134,2.00e-08,62;UBERON:0002036,2.00e-08,62;UBERON:0003082,2.00e-08,62;UBERON:0007500,3.09e-08,59;UBERON:0001981,3.09e-08,59;UBERON:0004537,3.09e-08,59;UBERON:0006965,3.09e-08,59;UBERON:0004211,3.24e-08,15;UBERON:0009773,3.24e-08,15;UBERON:0001231,3.24e-08,15;UBERON:0001285,3.24e-08,15;UBERON:0007684,3.24e-08,15;UBERON:0004208,3.24e-08,15;UBERON:0005256,1.10e-07,122;UBERON:0002100,1.12e-07,199;UBERON:0002385,1.33e-07,64;UBERON:0001015,1.33e-07,64;UBERON:0000383,1.33e-07,64;UBERON:0001637,1.47e-07,42;UBERON:0003509,1.47e-07,42;UBERON:0004572,1.47e-07,42;UBERON:0004872,1.67e-07,83;UBERON:0000353,2.09e-07,15;UBERON:0001225,2.41e-07,12;UBERON:0008987,2.41e-07,12;UBERON:0006555,2.86e-07,16;UBERON:0004819,2.86e-07,16;UBERON:0001851,5.86e-07,15;UBERON:0001009,8.72e-07,112 | |||
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| ||
|short_description=p3@ATP5L | |||
}} | }} |
Latest revision as of 00:12, 16 September 2015
Short description: | p3@ATP5L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP5L_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000529790_5end |
EntrezGene: | ATP5L |
HGNC: | 14247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.33e-15 | 121 |
embryonic cell | 3.07e-13 | 250 |
epithelial cell | 5.00e-11 | 253 |
electrically responsive cell | 7.45e-11 | 61 |
electrically active cell | 7.45e-11 | 61 |
smooth muscle cell | 9.67e-11 | 43 |
smooth muscle myoblast | 9.67e-11 | 43 |
muscle cell | 6.17e-10 | 55 |
muscle precursor cell | 1.62e-09 | 58 |
myoblast | 1.62e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.62e-09 | 58 |
vascular associated smooth muscle cell | 9.73e-09 | 32 |
epithelial cell of nephron | 3.24e-08 | 15 |
kidney cell | 1.33e-07 | 17 |
kidney epithelial cell | 1.33e-07 | 17 |
kidney cortical cell | 2.41e-07 | 12 |
renal cortical epithelial cell | 2.41e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.52e-10 | 51 |
immune system cancer | 3.52e-10 | 51 |
leukemia | 1.33e-07 | 39 |
disease of cellular proliferation | 1.99e-07 | 239 |
organ system cancer | 2.52e-07 | 137 |
cancer | 2.53e-07 | 235 |