FFCP PHASE1:Hg19::chr2:100938891..100938902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164832 | |EntrezGene=164832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24788 | |HGNC=24788 | ||
|TSSclassifier=strong | |||
|UniProt=Q1L5Z9 | |UniProt=Q1L5Z9 | ||
|association_with_transcript=292bp_to_ENST00000393437,NM_198461,uc002tal.3_5end | |association_with_transcript=292bp_to_ENST00000393437,NM_198461,uc002tal.3_5end | ||
|cluster_id=chr2:100938891..100938902,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_LONRF2_5end | |description=CAGE_peak_1_at_LONRF2_5end | ||
|id=chr2:100938891..100938902,- | |id=chr2:100938891..100938902,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.92e-09;2!CL:0000242;6.92e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.01e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.72e-13;82!UBERON:0006215;1.13e-12;3!UBERON:0010122;2.48e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.91e-59!57;UBERON:0005068!5.91e-59!57;UBERON:0006241!5.91e-59!57;UBERON:0007135!5.91e-59!57;UBERON:0007023!4.19e-56!115;UBERON:0001017!1.27e-52!82;UBERON:0002616!2.05e-51!59;UBERON:0002780!4.22e-51!41;UBERON:0001890!4.22e-51!41;UBERON:0006240!4.22e-51!41;UBERON:0005743!4.62e-51!86;UBERON:0000955!1.69e-50!69;UBERON:0006238!1.69e-50!69;UBERON:0003080!1.46e-49!42;UBERON:0000073!1.67e-47!94;UBERON:0001016!1.67e-47!94;UBERON:0002346!1.37e-42!90;UBERON:0002020!5.31e-42!34;UBERON:0003528!5.31e-42!34;UBERON:0001893!1.90e-41!34;UBERON:0003075!1.02e-40!86;UBERON:0007284!1.02e-40!86;UBERON:0002791!4.14e-40!33;UBERON:0001869!1.54e-39!32;UBERON:0003056!1.60e-31!61;UBERON:0000956!7.28e-30!25;UBERON:0000203!7.28e-30!25;UBERON:0002619!1.82e-29!22;UBERON:0001950!5.33e-27!20;UBERON:0000033!5.55e-25!123;UBERON:0000153!4.91e-24!129;UBERON:0007811!4.91e-24!129;UBERON:0000924!9.31e-24!173;UBERON:0006601!9.31e-24!173;UBERON:0004121!3.25e-22!169;UBERON:0000025!2.25e-16!194;UBERON:0002420!1.34e-13!9;UBERON:0007245!1.34e-13!9;UBERON:0010009!1.34e-13!9;UBERON:0010011!1.34e-13!9;UBERON:0000454!1.34e-13!9;UBERON:0002308!1.72e-13!9;UBERON:0000125!1.72e-13!9;UBERON:0004111!3.08e-13!241;UBERON:0000475!8.38e-13!365;UBERON:0001871!8.40e-13!7;UBERON:0001894!6.68e-11!7;UBERON:0006222!6.68e-11!7;UBERON:0003076!8.60e-11!15;UBERON:0003057!8.60e-11!15;UBERON:0009663!9.80e-11!7;UBERON:0000483!3.08e-10!309;UBERON:0000477!4.37e-10!286;UBERON:0000119!6.12e-10!312;UBERON:0004733!1.59e-09!12;UBERON:0002028!1.59e-09!12;UBERON:0007277!1.59e-09!12;UBERON:0000062!1.83e-09!511;UBERON:0000481!4.49e-09!347;UBERON:0004732!1.30e-08!13;UBERON:0002298!1.33e-08!8;UBERON:0000349!2.26e-08!5;UBERON:0001872!3.64e-08!5;UBERON:0002021!3.69e-08!5;UBERON:0000064!1.04e-07!219;UBERON:0000369!1.06e-07!4;UBERON:0002435!1.06e-07!4;UBERON:0000204!1.06e-07!4;UBERON:0010082!1.06e-07!4;UBERON:0000468!1.43e-07!659;UBERON:0000922!1.88e-07!612;UBERON:0000200!7.10e-07!6;UBERON:0003296!9.91e-07!4;UBERON:0010133!9.91e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!5.91e-59!57;UBERON:0005068!5.91e-59!57;UBERON:0006241!5.91e-59!57;UBERON:0007135!5.91e-59!57;UBERON:0007023!4.19e-56!115;UBERON:0001017!1.27e-52!82;UBERON:0002616!2.05e-51!59;UBERON:0002780!4.22e-51!41;UBERON:0001890!4.22e-51!41;UBERON:0006240!4.22e-51!41;UBERON:0005743!4.62e-51!86;UBERON:0000955!1.69e-50!69;UBERON:0006238!1.69e-50!69;UBERON:0003080!1.46e-49!42;UBERON:0000073!1.67e-47!94;UBERON:0001016!1.67e-47!94;UBERON:0002346!1.37e-42!90;UBERON:0002020!5.31e-42!34;UBERON:0003528!5.31e-42!34;UBERON:0001893!1.90e-41!34;UBERON:0003075!1.02e-40!86;UBERON:0007284!1.02e-40!86;UBERON:0002791!4.14e-40!33;UBERON:0001869!1.54e-39!32;UBERON:0003056!1.60e-31!61;UBERON:0000956!7.28e-30!25;UBERON:0000203!7.28e-30!25;UBERON:0002619!1.82e-29!22;UBERON:0001950!5.33e-27!20;UBERON:0000033!5.55e-25!123;UBERON:0000153!4.91e-24!129;UBERON:0007811!4.91e-24!129;UBERON:0000924!9.31e-24!173;UBERON:0006601!9.31e-24!173;UBERON:0004121!3.25e-22!169;UBERON:0000025!2.25e-16!194;UBERON:0002420!1.34e-13!9;UBERON:0007245!1.34e-13!9;UBERON:0010009!1.34e-13!9;UBERON:0010011!1.34e-13!9;UBERON:0000454!1.34e-13!9;UBERON:0002308!1.72e-13!9;UBERON:0000125!1.72e-13!9;UBERON:0004111!3.08e-13!241;UBERON:0000475!8.38e-13!365;UBERON:0001871!8.40e-13!7;UBERON:0001894!6.68e-11!7;UBERON:0006222!6.68e-11!7;UBERON:0003076!8.60e-11!15;UBERON:0003057!8.60e-11!15;UBERON:0009663!9.80e-11!7;UBERON:0000483!3.08e-10!309;UBERON:0000477!4.37e-10!286;UBERON:0000119!6.12e-10!312;UBERON:0004733!1.59e-09!12;UBERON:0002028!1.59e-09!12;UBERON:0007277!1.59e-09!12;UBERON:0000062!1.83e-09!511;UBERON:0000481!4.49e-09!347;UBERON:0004732!1.30e-08!13;UBERON:0002298!1.33e-08!8;UBERON:0000349!2.26e-08!5;UBERON:0001872!3.64e-08!5;UBERON:0002021!3.69e-08!5;UBERON:0000064!1.04e-07!219;UBERON:0000369!1.06e-07!4;UBERON:0002435!1.06e-07!4;UBERON:0000204!1.06e-07!4;UBERON:0010082!1.06e-07!4;UBERON:0000468!1.43e-07!659;UBERON:0000922!1.88e-07!612;UBERON:0000200!7.10e-07!6;UBERON:0003296!9.91e-07!4;UBERON:0010133!9.91e-07!4 | ||
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|short_description=p1@LONRF2 | |short_description=p1@LONRF2 | ||
}} | }} |
Latest revision as of 23:01, 15 September 2015
Short description: | p1@LONRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LONRF2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 292bp_to_ENST00000393437, NM_198461, uc002tal.3_5end |
EntrezGene: | LONRF2 |
HGNC: | 24788 |
UniProt: | Q1L5Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.01e-08 | 2 |