FFCP PHASE1:Hg19::chr2:233497931..233497947,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80303 | |EntrezGene=80303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29556 | |HGNC=29556 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUP0 | |UniProt=Q9BUP0 | ||
|association_with_transcript=0bp_to_ENST00000264059_5end | |association_with_transcript=0bp_to_ENST00000264059_5end | ||
|cluster_id=chr2:233497931..233497947,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_EFHD1_5end | |description=CAGE_peak_3_at_EFHD1_5end | ||
|id=chr2:233497931..233497947,+ | |id=chr2:233497931..233497947,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.49e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.97e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.27e-20;82!UBERON:0006241;7.53e-09;3!UBERON:0003057;7.53e-09;3!UBERON:0006215;5.49e-08;3!UBERON:0002532;1.91e-07;206!UBERON:0010316;1.91e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.47e-70!115;UBERON:0001049!3.14e-41!57;UBERON:0005068!3.14e-41!57;UBERON:0006241!3.14e-41!57;UBERON:0007135!3.14e-41!57;UBERON:0001017!2.26e-37!82;UBERON:0005743!2.94e-36!86;UBERON:0002616!8.17e-35!59;UBERON:0000955!3.81e-34!69;UBERON:0006238!3.81e-34!69;UBERON:0000073!1.06e-33!94;UBERON:0001016!1.06e-33!94;UBERON:0003075!1.12e-32!86;UBERON:0007284!1.12e-32!86;UBERON:0003080!1.03e-30!42;UBERON:0002346!2.54e-30!90;UBERON:0002780!7.45e-30!41;UBERON:0001890!7.45e-30!41;UBERON:0006240!7.45e-30!41;UBERON:0001893!8.72e-29!34;UBERON:0002020!9.29e-29!34;UBERON:0003528!9.29e-29!34;UBERON:0002791!1.23e-27!33;UBERON:0001869!2.93e-26!32;UBERON:0004121!7.08e-22!169;UBERON:0003056!1.06e-21!61;UBERON:0000924!8.16e-21!173;UBERON:0006601!8.16e-21!173;UBERON:0002619!3.69e-20!22;UBERON:0000956!1.95e-18!25;UBERON:0000203!1.95e-18!25;UBERON:0000033!2.37e-18!123;UBERON:0000153!3.01e-18!129;UBERON:0007811!3.01e-18!129;UBERON:0001950!7.26e-18!20;UBERON:0000064!1.61e-13!219;UBERON:0000062!2.25e-12!511;UBERON:0002308!2.96e-12!9;UBERON:0000125!2.96e-12!9;UBERON:0002420!3.24e-12!9;UBERON:0007245!3.24e-12!9;UBERON:0010009!3.24e-12!9;UBERON:0010011!3.24e-12!9;UBERON:0000454!3.24e-12!9;UBERON:0000475!1.60e-11!365;UBERON:0003076!2.13e-11!15;UBERON:0003057!2.13e-11!15;UBERON:0002298!6.62e-11!8;UBERON:0000025!4.06e-10!194;UBERON:0009663!7.55e-10!7;UBERON:0004732!2.55e-09!13;UBERON:0000200!1.47e-08!6;UBERON:0004733!3.45e-08!12;UBERON:0002028!3.45e-08!12;UBERON:0007277!3.45e-08!12;UBERON:0004111!4.29e-08!241;UBERON:0001871!6.54e-08!7;UBERON:0000349!1.81e-07!5;UBERON:0000477!2.42e-07!286;UBERON:0000468!4.61e-07!659;UBERON:0000467!8.64e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.96e-47;34!UBERON:0003528;7.19e-46;34!UBERON:0002020;7.19e-46;34!UBERON:0002791;1.63e-44;32!UBERON:0001869;2.68e-44;32!UBERON:0000073;3.14e-40;53!UBERON:0002616;3.14e-40;53!UBERON:0002780;1.05e-39;41!UBERON:0001890;1.05e-39;41!UBERON:0002619;8.16e-39;22!UBERON:0001950;4.86e-34;20!UBERON:0000956;1.08e-33;25!UBERON:0000203;1.08e-33;25!UBERON:0001017;8.20e-27;75!UBERON:0000955;1.69e-25;68!UBERON:0000125;7.34e-24;9!UBERON:0002308;7.34e-24;9!UBERON:0002420;9.33e-24;9!UBERON:0007245;9.33e-24;9!UBERON:0010009;9.33e-24;9!UBERON:0010011;9.33e-24;9!UBERON:0000454;9.33e-24;9!UBERON:0007023;4.16e-22;114!UBERON:0001016;5.72e-22;83!UBERON:0004732;3.60e-19;13!UBERON:0009663;7.81e-19;7!UBERON:0004733;9.46e-17;12!UBERON:0002028;9.46e-17;12!UBERON:0002298;1.03e-16;6!UBERON:0000200;3.26e-16;6!UBERON:0000349;7.80e-14;5!UBERON:0000369;6.82e-11;4!UBERON:0002435;6.82e-11;4!UBERON:0000204;6.82e-11;4!UBERON:0002680;4.56e-10;9!UBERON:0001895;4.56e-10;9!UBERON:0001871;7.38e-10;6!UBERON:0001872;2.60e-09;5!UBERON:0000988;3.31e-09;3!UBERON:0001896;3.31e-09;3!UBERON:0005290;3.31e-09;3!UBERON:0001870;5.32e-09;3!UBERON:0002021;5.54e-09;5!UBERON:0002240;7.53e-09;3!UBERON:0005174;7.53e-09;3!UBERON:0001137;7.53e-09;3!UBERON:0005383;1.45e-08;3!UBERON:0005382;1.45e-08;3!UBERON:0011216;1.69e-08;132!UBERON:0003124;5.49e-08;3!UBERON:0000920;5.49e-08;3!UBERON:0010314;1.07e-07;132!UBERON:0005162;4.89e-07;2!UBERON:0000122;4.89e-07;2!UBERON:0001897;5.17e-07;2!UBERON:0010225;5.17e-07;2!UBERON:0001875;6.58e-07;2!UBERON:0006514;6.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.56e-79,56;UBERON:0005068,1.56e-79,56;UBERON:0006241,1.56e-79,56;UBERON:0007135,1.56e-79,56;UBERON:0007023,8.14e-77,114;UBERON:0000073,2.59e-72,53;UBERON:0002616,2.59e-72,53;UBERON:0001017,7.47e-62,81;UBERON:0003075,1.59e-61,82;UBERON:0007284,1.59e-61,82;UBERON:0000955,2.08e-59,68;UBERON:0006238,2.08e-59,68;UBERON:0002346,4.33e-58,86;UBERON:0001016,2.47e-57,89;UBERON:0002780,5.17e-56,41;UBERON:0001890,5.17e-56,41;UBERON:0003080,5.17e-56,41;UBERON:0006240,5.17e-56,41;UBERON:0001893,3.96e-55,34;UBERON:0003528,4.50e-55,34;UBERON:0002020,4.50e-55,34;UBERON:0002791,3.93e-50,32;UBERON:0001869,7.04e-50,32;UBERON:0010371,7.06e-46,104;UBERON:0003056,3.86e-40,61;UBERON:0002619,8.48e-39,22;UBERON:0010314,1.10e-38,132;UBERON:0001950,5.21e-34,20;UBERON:0000956,1.11e-33,25;UBERON:0000203,1.11e-33,25;UBERON:0004121,1.09e-30,171;UBERON:0000924,1.09e-30,171;UBERON:0006601,1.09e-30,171;UBERON:0000125,6.54e-24,9;UBERON:0002308,6.54e-24,9;UBERON:0002420,7.88e-24,9;UBERON:0007245,7.88e-24,9;UBERON:0010009,7.88e-24,9;UBERON:0010011,7.88e-24,9;UBERON:0000454,7.88e-24,9;UBERON:0003076,1.36e-23,15;UBERON:0003057,1.36e-23,15;UBERON:0000025,5.60e-20,192;UBERON:0004732,3.47e-19,13;UBERON:0009663,7.14e-19,7;UBERON:0011216,2.30e-18,223;UBERON:0004733,8.96e-17,12;UBERON:0002028,8.96e-17,12;UBERON:0007277,8.96e-17,12;UBERON:0002298,1.09e-16,6;UBERON:0000200,3.54e-16,6;UBERON:0004111,3.60e-15,240;UBERON:0000349,6.57e-14,5;UBERON:0000369,6.16e-11,4;UBERON:0002435,6.16e-11,4;UBERON:0000204,6.16e-11,4;UBERON:0010082,6.16e-11,4;UBERON:0002680,4.17e-10,9;UBERON:0001895,4.17e-10,9;UBERON:0010092,4.17e-10,9;UBERON:0000483,5.29e-10,306;UBERON:0001871,7.67e-10,6;UBERON:0000119,8.69e-10,309;UBERON:0001872,2.57e-09,5;UBERON:0000988,3.27e-09,3;UBERON:0001896,3.55e-09,3;UBERON:0005290,3.55e-09,3;UBERON:0010096,3.55e-09,3;UBERON:0001870,5.47e-09,3;UBERON:0002021,5.60e-09,5;UBERON:0002240,6.25e-09,3;UBERON:0005174,6.25e-09,3;UBERON:0001137,6.25e-09,3;UBERON:0005383,1.38e-08,3;UBERON:0005382,1.38e-08,3;UBERON:0000920,3.97e-08,3;UBERON:0005162,5.03e-07,2;UBERON:0000122,5.03e-07,2;UBERON:0001897,5.18e-07,2;UBERON:0010225,5.18e-07,2;UBERON:0001875,6.68e-07,2;UBERON:0006514,6.68e-07,2 | |||
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| ||
|short_description=p3@EFHD1 | |short_description=p3@EFHD1 | ||
}} | }} |
Latest revision as of 21:58, 15 September 2015
Short description: | p3@EFHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFHD1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000264059_5end |
EntrezGene: | EFHD1 |
HGNC: | 29556 |
UniProt: | Q9BUP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.97e-08 | 3 |