FFCP PHASE1:Hg19::chr7:119913688..119913728,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:119913688..119913728,+ to FFCP PHASE1:Hg19::chr7:119913688..119913728,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3751 | |EntrezGene=3751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6238 | |HGNC=6238 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZV8,A4D0V9 | |UniProt=Q9NZV8,A4D0V9 | ||
|association_with_transcript=0bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | |||
|cluster_id=chr7:119913688..119913728,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_KCND2_5end | |||
|id=chr7:119913688..119913728,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.41e-08!6;CL:0000031!1.41e-08!6;CL:0000404!1.41e-08!6;CL:0000047!3.16e-08!8;CL:0002322!1.46e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.41e-07;2!CL:0000242;1.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.02e-12;3!UBERON:0006241;1.55e-10;3!UBERON:0003057;1.55e-10;3!UBERON:0006601;9.76e-10;82!UBERON:0010122;2.25e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-50!57;UBERON:0005068!1.17e-50!57;UBERON:0006241!1.17e-50!57;UBERON:0007135!1.17e-50!57;UBERON:0001017!2.78e-49!82;UBERON:0005743!1.17e-47!86;UBERON:0002616!9.64e-44!59;UBERON:0000073!2.56e-41!94;UBERON:0001016!2.56e-41!94;UBERON:0002780!1.17e-38!41;UBERON:0001890!1.17e-38!41;UBERON:0006240!1.17e-38!41;UBERON:0000955!3.10e-38!69;UBERON:0006238!3.10e-38!69;UBERON:0003080!1.86e-37!42;UBERON:0002020!9.19e-35!34;UBERON:0003528!9.19e-35!34;UBERON:0001893!1.41e-34!34;UBERON:0002791!3.65e-33!33;UBERON:0001869!1.85e-32!32;UBERON:0003075!6.64e-31!86;UBERON:0007284!6.64e-31!86;UBERON:0002346!4.48e-30!90;UBERON:0002619!8.59e-27!22;UBERON:0007023!4.97e-26!115;UBERON:0001950!5.81e-24!20;UBERON:0003056!2.11e-23!61;UBERON:0000956!7.72e-23!25;UBERON:0000203!7.72e-23!25;UBERON:0004121!1.62e-17!169;UBERON:0000924!2.02e-17!173;UBERON:0006601!2.02e-17!173;UBERON:0000025!2.72e-17!194;UBERON:0000033!1.32e-16!123;UBERON:0000153!5.53e-16!129;UBERON:0007811!5.53e-16!129;UBERON:0003076!6.95e-14!15;UBERON:0003057!6.95e-14!15;UBERON:0002308!1.06e-13!9;UBERON:0000125!1.06e-13!9;UBERON:0004111!2.11e-11!241;UBERON:0009663!6.38e-11!7;UBERON:0002420!1.54e-10!9;UBERON:0007245!1.54e-10!9;UBERON:0010009!1.54e-10!9;UBERON:0010011!1.54e-10!9;UBERON:0000454!1.54e-10!9;UBERON:0004733!3.05e-10!12;UBERON:0002028!3.05e-10!12;UBERON:0007277!3.05e-10!12;UBERON:0000483!3.40e-10!309;UBERON:0000119!6.69e-10!312;UBERON:0000200!1.18e-09!6;UBERON:0004732!2.88e-09!13;UBERON:0002298!4.01e-09!8;UBERON:0002021!1.46e-08!5;UBERON:0001872!1.92e-08!5;UBERON:0000477!2.74e-08!286;UBERON:0000369!2.34e-07!4;UBERON:0002435!2.34e-07!4;UBERON:0000204!2.34e-07!4;UBERON:0010082!2.34e-07!4;UBERON:0000064!7.07e-07!219;UBERON:0001871!7.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-44;32!UBERON:0003528;1.52e-43;34!UBERON:0002020;1.52e-43;34!UBERON:0002791;5.77e-41;32!UBERON:0001893;1.70e-40;34!UBERON:0002780;5.68e-37;41!UBERON:0001890;5.68e-37;41!UBERON:0000073;3.31e-35;53!UBERON:0002616;3.31e-35;53!UBERON:0002619;4.09e-35;22!UBERON:0000956;1.36e-30;25!UBERON:0000203;1.36e-30;25!UBERON:0001950;1.63e-29;20!UBERON:0000955;1.05e-27;68!UBERON:0001017;1.85e-26;75!UBERON:0000125;8.10e-24;9!UBERON:0002308;8.10e-24;9!UBERON:0001016;3.07e-22;83!UBERON:0004733;2.32e-18;12!UBERON:0002028;2.32e-18;12!UBERON:0009663;1.03e-17;7!UBERON:0004732;7.76e-17;13!UBERON:0002298;1.26e-14;6!UBERON:0000369;1.38e-14;4!UBERON:0002435;1.38e-14;4!UBERON:0000204;1.38e-14;4!UBERON:0002680;1.78e-14;9!UBERON:0001895;1.78e-14;9!UBERON:0000200;3.60e-14;6!UBERON:0002420;1.26e-13;9!UBERON:0007245;1.26e-13;9!UBERON:0010009;1.26e-13;9!UBERON:0010011;1.26e-13;9!UBERON:0000454;1.26e-13;9!UBERON:0005383;1.18e-11;3!UBERON:0005382;1.18e-11;3!UBERON:0001872;1.62e-11;5!UBERON:0000988;2.04e-11;3!UBERON:0002240;1.55e-10;3!UBERON:0005174;1.55e-10;3!UBERON:0001137;1.55e-10;3!UBERON:0007023;3.68e-09;114!UBERON:0011216;8.69e-09;132!UBERON:0001873;2.25e-08;2!UBERON:0001897;4.28e-08;2!UBERON:0010225;4.28e-08;2!UBERON:0001871;6.51e-08;6!UBERON:0002771;6.63e-08;2!UBERON:0001954;6.63e-08;2!UBERON:0002148;6.63e-08;2!UBERON:0001875;6.63e-08;2!UBERON:0006331;6.63e-08;2!UBERON:0009662;6.63e-08;2!UBERON:0003022;6.63e-08;2!UBERON:0002421;6.63e-08;2!UBERON:0006514;6.63e-08;2!UBERON:0002600;6.63e-08;2!UBERON:0002021;2.16e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.92e-76,56;UBERON:0005068,1.92e-76,56;UBERON:0006241,1.92e-76,56;UBERON:0007135,1.92e-76,56;UBERON:0000073,2.54e-68,53;UBERON:0002616,2.54e-68,53;UBERON:0001017,2.54e-65,81;UBERON:0001016,6.29e-58,89;UBERON:0000955,1.73e-57,68;UBERON:0006238,1.73e-57,68;UBERON:0003528,6.84e-52,34;UBERON:0002020,6.84e-52,34;UBERON:0001869,1.03e-50,32;UBERON:0002780,1.93e-50,41;UBERON:0001890,1.93e-50,41;UBERON:0003080,1.93e-50,41;UBERON:0006240,1.93e-50,41;UBERON:0003075,1.54e-49,82;UBERON:0007284,1.54e-49,82;UBERON:0001893,1.83e-47,34;UBERON:0002346,7.90e-47,86;UBERON:0002791,3.86e-46,32;UBERON:0010371,9.66e-42,104;UBERON:0002619,1.87e-35,22;UBERON:0003056,6.30e-32,61;UBERON:0000956,6.83e-31,25;UBERON:0000203,6.83e-31,25;UBERON:0001950,1.06e-29,20;UBERON:0010314,4.21e-29,132;UBERON:0004121,7.32e-29,171;UBERON:0000924,7.32e-29,171;UBERON:0006601,7.32e-29,171;UBERON:0007023,2.99e-27,114;UBERON:0003076,1.59e-26,15;UBERON:0003057,1.59e-26,15;UBERON:0000125,7.39e-24,9;UBERON:0002308,7.39e-24,9;UBERON:0011216,2.93e-22,223;UBERON:0004733,1.70e-18,12;UBERON:0002028,1.70e-18,12;UBERON:0007277,1.70e-18,12;UBERON:0000025,1.93e-18,192;UBERON:0009663,1.13e-17,7;UBERON:0004732,5.83e-17,13;UBERON:0002298,8.49e-15,6;UBERON:0000369,1.28e-14,4;UBERON:0002435,1.28e-14,4;UBERON:0000204,1.28e-14,4;UBERON:0010082,1.28e-14,4;UBERON:0002680,1.56e-14,9;UBERON:0001895,1.56e-14,9;UBERON:0010092,1.56e-14,9;UBERON:0000200,2.81e-14,6;UBERON:0004111,6.69e-14,240;UBERON:0002420,1.35e-13,9;UBERON:0007245,1.35e-13,9;UBERON:0010009,1.35e-13,9;UBERON:0010011,1.35e-13,9;UBERON:0000454,1.35e-13,9;UBERON:0005383,1.01e-11,3;UBERON:0005382,1.01e-11,3;UBERON:0001872,1.24e-11,5;UBERON:0000988,1.66e-11,3;UBERON:0000483,4.12e-11,306;UBERON:0000119,6.59e-11,309;UBERON:0002240,2.50e-10,3;UBERON:0005174,2.50e-10,3;UBERON:0001137,2.50e-10,3;UBERON:0001873,2.22e-08,2;UBERON:0010122,2.22e-08,2;UBERON:0001897,2.39e-08,2;UBERON:0010225,2.39e-08,2;UBERON:0001954,4.07e-08,2;UBERON:0003022,4.07e-08,2;UBERON:0002421,4.07e-08,2;UBERON:0002600,4.07e-08,2;UBERON:0002148,5.40e-08,2;UBERON:0006331,5.40e-08,2;UBERON:0009662,5.40e-08,2;UBERON:0001871,7.59e-08,6;UBERON:0001875,7.92e-08,2;UBERON:0006514,7.92e-08,2;UBERON:0002771,9.10e-08,2;UBERON:0002021,2.12e-07,5;UBERON:0000349,8.83e-07,5 | |||
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|short_description=p2@KCND2 | |||
}} | }} |
Latest revision as of 21:05, 15 September 2015
Short description: | p2@KCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCND2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000331113, NM_012281, uc003vjj.1_5end |
EntrezGene: | KCND2 |
HGNC: | 6238 |
UniProt: | Q9NZV8A4D0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.28e-07 | 2 |