FFCP PHASE1:Hg19::chr7:119913688..119913728,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3751 | |EntrezGene=3751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6238 | |HGNC=6238 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZV8,A4D0V9 | |UniProt=Q9NZV8,A4D0V9 | ||
|association_with_transcript=0bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | |association_with_transcript=0bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | ||
|cluster_id=chr7:119913688..119913728,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_2_at_KCND2_5end | |description=CAGE_peak_2_at_KCND2_5end | ||
|id=chr7:119913688..119913728,+ | |id=chr7:119913688..119913728,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.41e-08!6;CL:0000031!1.41e-08!6;CL:0000404!1.41e-08!6;CL:0000047!3.16e-08!8;CL:0002322!1.46e-07!5 | |ontology_enrichment_celltype=CL:0000540!1.41e-08!6;CL:0000031!1.41e-08!6;CL:0000404!1.41e-08!6;CL:0000047!3.16e-08!8;CL:0002322!1.46e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.41e-07;2!CL:0000242;1.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.02e-12;3!UBERON:0006241;1.55e-10;3!UBERON:0003057;1.55e-10;3!UBERON:0006601;9.76e-10;82!UBERON:0010122;2.25e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-50!57;UBERON:0005068!1.17e-50!57;UBERON:0006241!1.17e-50!57;UBERON:0007135!1.17e-50!57;UBERON:0001017!2.78e-49!82;UBERON:0005743!1.17e-47!86;UBERON:0002616!9.64e-44!59;UBERON:0000073!2.56e-41!94;UBERON:0001016!2.56e-41!94;UBERON:0002780!1.17e-38!41;UBERON:0001890!1.17e-38!41;UBERON:0006240!1.17e-38!41;UBERON:0000955!3.10e-38!69;UBERON:0006238!3.10e-38!69;UBERON:0003080!1.86e-37!42;UBERON:0002020!9.19e-35!34;UBERON:0003528!9.19e-35!34;UBERON:0001893!1.41e-34!34;UBERON:0002791!3.65e-33!33;UBERON:0001869!1.85e-32!32;UBERON:0003075!6.64e-31!86;UBERON:0007284!6.64e-31!86;UBERON:0002346!4.48e-30!90;UBERON:0002619!8.59e-27!22;UBERON:0007023!4.97e-26!115;UBERON:0001950!5.81e-24!20;UBERON:0003056!2.11e-23!61;UBERON:0000956!7.72e-23!25;UBERON:0000203!7.72e-23!25;UBERON:0004121!1.62e-17!169;UBERON:0000924!2.02e-17!173;UBERON:0006601!2.02e-17!173;UBERON:0000025!2.72e-17!194;UBERON:0000033!1.32e-16!123;UBERON:0000153!5.53e-16!129;UBERON:0007811!5.53e-16!129;UBERON:0003076!6.95e-14!15;UBERON:0003057!6.95e-14!15;UBERON:0002308!1.06e-13!9;UBERON:0000125!1.06e-13!9;UBERON:0004111!2.11e-11!241;UBERON:0009663!6.38e-11!7;UBERON:0002420!1.54e-10!9;UBERON:0007245!1.54e-10!9;UBERON:0010009!1.54e-10!9;UBERON:0010011!1.54e-10!9;UBERON:0000454!1.54e-10!9;UBERON:0004733!3.05e-10!12;UBERON:0002028!3.05e-10!12;UBERON:0007277!3.05e-10!12;UBERON:0000483!3.40e-10!309;UBERON:0000119!6.69e-10!312;UBERON:0000200!1.18e-09!6;UBERON:0004732!2.88e-09!13;UBERON:0002298!4.01e-09!8;UBERON:0002021!1.46e-08!5;UBERON:0001872!1.92e-08!5;UBERON:0000477!2.74e-08!286;UBERON:0000369!2.34e-07!4;UBERON:0002435!2.34e-07!4;UBERON:0000204!2.34e-07!4;UBERON:0010082!2.34e-07!4;UBERON:0000064!7.07e-07!219;UBERON:0001871!7.25e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!1.17e-50!57;UBERON:0005068!1.17e-50!57;UBERON:0006241!1.17e-50!57;UBERON:0007135!1.17e-50!57;UBERON:0001017!2.78e-49!82;UBERON:0005743!1.17e-47!86;UBERON:0002616!9.64e-44!59;UBERON:0000073!2.56e-41!94;UBERON:0001016!2.56e-41!94;UBERON:0002780!1.17e-38!41;UBERON:0001890!1.17e-38!41;UBERON:0006240!1.17e-38!41;UBERON:0000955!3.10e-38!69;UBERON:0006238!3.10e-38!69;UBERON:0003080!1.86e-37!42;UBERON:0002020!9.19e-35!34;UBERON:0003528!9.19e-35!34;UBERON:0001893!1.41e-34!34;UBERON:0002791!3.65e-33!33;UBERON:0001869!1.85e-32!32;UBERON:0003075!6.64e-31!86;UBERON:0007284!6.64e-31!86;UBERON:0002346!4.48e-30!90;UBERON:0002619!8.59e-27!22;UBERON:0007023!4.97e-26!115;UBERON:0001950!5.81e-24!20;UBERON:0003056!2.11e-23!61;UBERON:0000956!7.72e-23!25;UBERON:0000203!7.72e-23!25;UBERON:0004121!1.62e-17!169;UBERON:0000924!2.02e-17!173;UBERON:0006601!2.02e-17!173;UBERON:0000025!2.72e-17!194;UBERON:0000033!1.32e-16!123;UBERON:0000153!5.53e-16!129;UBERON:0007811!5.53e-16!129;UBERON:0003076!6.95e-14!15;UBERON:0003057!6.95e-14!15;UBERON:0002308!1.06e-13!9;UBERON:0000125!1.06e-13!9;UBERON:0004111!2.11e-11!241;UBERON:0009663!6.38e-11!7;UBERON:0002420!1.54e-10!9;UBERON:0007245!1.54e-10!9;UBERON:0010009!1.54e-10!9;UBERON:0010011!1.54e-10!9;UBERON:0000454!1.54e-10!9;UBERON:0004733!3.05e-10!12;UBERON:0002028!3.05e-10!12;UBERON:0007277!3.05e-10!12;UBERON:0000483!3.40e-10!309;UBERON:0000119!6.69e-10!312;UBERON:0000200!1.18e-09!6;UBERON:0004732!2.88e-09!13;UBERON:0002298!4.01e-09!8;UBERON:0002021!1.46e-08!5;UBERON:0001872!1.92e-08!5;UBERON:0000477!2.74e-08!286;UBERON:0000369!2.34e-07!4;UBERON:0002435!2.34e-07!4;UBERON:0000204!2.34e-07!4;UBERON:0010082!2.34e-07!4;UBERON:0000064!7.07e-07!219;UBERON:0001871!7.25e-07!7 | ||
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|short_description=p2@KCND2 | |short_description=p2@KCND2 | ||
}} | }} |
Latest revision as of 21:05, 15 September 2015
Short description: | p2@KCND2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCND2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000331113, NM_012281, uc003vjj.1_5end |
EntrezGene: | KCND2 |
HGNC: | 6238 |
UniProt: | Q9NZV8A4D0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Merkel cell | 2.28e-07 | 2 |