FFCP PHASE1:Hg19::chr7:119913185..119913236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3751 | |EntrezGene=3751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6238 | |HGNC=6238 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZV8,A4D0V9 | |UniProt=Q9NZV8,A4D0V9 | ||
|association_with_transcript=-485bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | |association_with_transcript=-485bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | ||
|cluster_id=chr7:119913185..119913236,+ | |||
|coexpression_cluster_id=C710 | |coexpression_cluster_id=C710 | ||
|description=CAGE_peak_1_at_KCND2_5end | |description=CAGE_peak_1_at_KCND2_5end | ||
|id=chr7:119913185..119913236,+ | |id=chr7:119913185..119913236,+ | ||
|ontology_enrichment_celltype=CL:0002322;1.63e-07;5 | |ontology_enrichment_celltype=CL:0002334!3.11e-08!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;1.63e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.17e-07,5;CL:0000047,8.04e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.29e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000073;3.57e-28;53!UBERON:0002616;3.57e-28;53!UBERON:0002780;1.31e-26;41!UBERON:0001890;1.31e-26;41!UBERON:0003528;2.52e-26;34!UBERON:0002020;2.52e-26;34!UBERON:0001893;3.00e-25;34!UBERON:0002791;3.50e-25;32!UBERON:0001869;5.94e-25;32!UBERON:0002619;2.59e-22;22!UBERON:0001950;3.63e-20;20!UBERON:0000956;5.39e-19;25!UBERON:0000203;5.39e-19;25!UBERON:0000955;5.20e-18;68!UBERON:0001017;1.01e-17;75!UBERON:0001016;5.39e-15;83!UBERON:0000125;1.62e-14;9!UBERON:0002308;1.62e-14;9!UBERON:0002420;5.91e-14;9!UBERON:0007245;5.91e-14;9!UBERON:0010009;5.91e-14;9!UBERON:0010011;5.91e-14;9!UBERON:0000454;5.91e-14;9!UBERON:0009663;1.46e-11;7!UBERON:0004733;7.27e-11;12!UBERON:0002028;7.27e-11;12!UBERON:0002298;1.93e-10;6!UBERON:0004732;7.68e-10;13!UBERON:0001894;2.61e-08;7!UBERON:0000200;3.15e-08;6!UBERON:0007023;3.22e-08;114!UBERON:0000369;1.31e-07;4!UBERON:0002435;1.31e-07;4!UBERON:0000204;1.31e-07;4!UBERON:0000349;1.63e-07;5!UBERON:0001872;5.11e-07;5!UBERON:0002680;5.98e-07;9!UBERON:0001895;5.98e-07;9!UBERON:0001871;9.16e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.34e-33!82;UBERON:0001049!3.77e-32!57;UBERON:0005068!3.77e-32!57;UBERON:0006241!3.77e-32!57;UBERON:0007135!3.77e-32!57;UBERON:0005743!2.38e-31!86;UBERON:0007023!9.48e-29!115;UBERON:0002616!4.37e-28!59;UBERON:0000073!4.96e-27!94;UBERON:0001016!4.96e-27!94;UBERON:0000955!3.58e-25!69;UBERON:0006238!3.58e-25!69;UBERON:0003080!8.71e-24!42;UBERON:0002780!5.58e-23!41;UBERON:0001890!5.58e-23!41;UBERON:0006240!5.58e-23!41;UBERON:0003075!1.11e-21!86;UBERON:0007284!1.11e-21!86;UBERON:0002346!1.69e-20!90;UBERON:0002020!1.75e-19!34;UBERON:0003528!1.75e-19!34;UBERON:0001893!6.71e-19!34;UBERON:0002791!2.68e-18!33;UBERON:0001869!1.32e-17!32;UBERON:0003056!6.47e-15!61;UBERON:0002619!1.36e-14!22;UBERON:0000025!6.08e-14!194;UBERON:0001950!3.52e-13!20;UBERON:0004121!1.46e-12!169;UBERON:0000924!3.82e-12!173;UBERON:0006601!3.82e-12!173;UBERON:0000956!5.65e-12!25;UBERON:0000203!5.65e-12!25;UBERON:0000153!1.16e-11!129;UBERON:0007811!1.16e-11!129;UBERON:0000033!1.79e-11!123;UBERON:0004111!2.01e-10!241;UBERON:0000483!3.73e-10!309;UBERON:0000119!9.41e-10!312;UBERON:0002308!1.25e-09!9;UBERON:0000125!1.25e-09!9;UBERON:0000475!1.63e-09!365;UBERON:0003076!2.02e-09!15;UBERON:0003057!2.02e-09!15;UBERON:0002420!2.40e-09!9;UBERON:0007245!2.40e-09!9;UBERON:0010009!2.40e-09!9;UBERON:0010011!2.40e-09!9;UBERON:0000454!2.40e-09!9;UBERON:0002298!1.27e-08!8;UBERON:0000477!1.35e-08!286;UBERON:0009663!9.13e-08!7;UBERON:0000064!5.76e-07!219;UBERON:0004733!8.15e-07!12;UBERON:0002028!8.15e-07!12;UBERON:0007277!8.15e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.57e-28;53!UBERON:0002616;3.57e-28;53!UBERON:0002780;1.31e-26;41!UBERON:0001890;1.31e-26;41!UBERON:0003528;2.52e-26;34!UBERON:0002020;2.52e-26;34!UBERON:0001893;3.00e-25;34!UBERON:0002791;3.50e-25;32!UBERON:0001869;5.94e-25;32!UBERON:0002619;2.59e-22;22!UBERON:0001950;3.63e-20;20!UBERON:0000956;5.39e-19;25!UBERON:0000203;5.39e-19;25!UBERON:0000955;5.20e-18;68!UBERON:0001017;1.01e-17;75!UBERON:0001016;5.39e-15;83!UBERON:0000125;1.62e-14;9!UBERON:0002308;1.62e-14;9!UBERON:0002420;5.91e-14;9!UBERON:0007245;5.91e-14;9!UBERON:0010009;5.91e-14;9!UBERON:0010011;5.91e-14;9!UBERON:0000454;5.91e-14;9!UBERON:0009663;1.46e-11;7!UBERON:0004733;7.27e-11;12!UBERON:0002028;7.27e-11;12!UBERON:0002298;1.93e-10;6!UBERON:0004732;7.68e-10;13!UBERON:0001894;2.61e-08;7!UBERON:0000200;3.15e-08;6!UBERON:0007023;3.22e-08;114!UBERON:0000369;1.31e-07;4!UBERON:0002435;1.31e-07;4!UBERON:0000204;1.31e-07;4!UBERON:0000349;1.63e-07;5!UBERON:0001872;5.11e-07;5!UBERON:0002680;5.98e-07;9!UBERON:0001895;5.98e-07;9!UBERON:0001871;9.16e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.49e-52,56;UBERON:0005068,5.49e-52,56;UBERON:0006241,5.49e-52,56;UBERON:0007135,5.49e-52,56;UBERON:0001017,4.15e-49,81;UBERON:0000073,1.70e-47,53;UBERON:0002616,1.70e-47,53;UBERON:0001016,2.19e-42,89;UBERON:0000955,1.04e-38,68;UBERON:0006238,1.04e-38,68;UBERON:0002780,1.29e-37,41;UBERON:0001890,1.29e-37,41;UBERON:0003080,1.29e-37,41;UBERON:0006240,1.29e-37,41;UBERON:0003528,1.06e-31,34;UBERON:0002020,1.06e-31,34;UBERON:0001893,9.58e-31,34;UBERON:0003075,1.47e-30,82;UBERON:0007284,1.47e-30,82;UBERON:0002791,7.73e-29,32;UBERON:0001869,1.15e-28,32;UBERON:0002346,2.00e-28,86;UBERON:0007023,2.85e-24,114;UBERON:0010371,1.26e-23,104;UBERON:0002619,5.92e-23,22;UBERON:0003056,1.20e-21,61;UBERON:0010314,1.39e-21,132;UBERON:0001950,1.08e-20,20;UBERON:0000956,1.50e-19,25;UBERON:0000203,1.50e-19,25;UBERON:0004121,5.85e-18,171;UBERON:0000924,5.85e-18,171;UBERON:0006601,5.85e-18,171;UBERON:0000025,7.60e-16,192;UBERON:0003076,4.95e-15,15;UBERON:0003057,4.95e-15,15;UBERON:0000125,2.20e-14,9;UBERON:0002308,2.20e-14,9;UBERON:0002420,6.22e-14,9;UBERON:0007245,6.22e-14,9;UBERON:0010009,6.22e-14,9;UBERON:0010011,6.22e-14,9;UBERON:0000454,6.22e-14,9;UBERON:0011216,2.53e-13,223;UBERON:0009663,2.00e-11,7;UBERON:0004111,5.96e-11,240;UBERON:0004733,7.91e-11,12;UBERON:0002028,7.91e-11,12;UBERON:0007277,7.91e-11,12;UBERON:0002298,2.13e-10,6;UBERON:0004732,8.29e-10,13;UBERON:0000200,2.18e-08,6;UBERON:0001894,3.21e-08,7;UBERON:0006222,3.21e-08,7;UBERON:0000483,5.57e-08,306;UBERON:0000349,9.79e-08,5;UBERON:0000119,9.80e-08,309;UBERON:0000369,1.27e-07,4;UBERON:0002435,1.27e-07,4;UBERON:0000204,1.27e-07,4;UBERON:0010082,1.27e-07,4;UBERON:0001872,2.65e-07,5;UBERON:0001871,5.19e-07,6;UBERON:0002680,6.02e-07,9;UBERON:0001895,6.02e-07,9;UBERON:0010092,6.02e-07,9 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.704772020479856,0,0,0,0,1.89515962028049,0.261185628199839,0,0,0,0,0.123766352960047,0,2.01697543935533,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,4.73763115637298,4.02292888304734,3.38456359648821,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.379891534993739,1.19168262731897,3.72887606973458,1.77334191099179,0,1.06748995729705,0,0.933633106199299,0,0.326923806226917,0,0,0,0.312160076830321,0,0.747243402759005,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0,0,0.772921620136887,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0,0,0,0,0,0,2.5614478287215,3.71083351300159,2.78865462886844,1.45125477021519,2.52320850875628,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,1.32969058292435,1.04007436911366,0,1.41849132023278,0,0.857867961948885,0.542621605391443,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.723906533337896,0.410952645100767,1.07436577943937,0,0,0,0,0,2.60279707715243,1.54657762555539,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48107807818777,2.30192959932094,1.68396056659844,3.71603532841533,2.55853624533352,1.28683136914886,1.48418066444991,0.308419387605311,0.887808626565635,0.492762936082855,1.03850885836724,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.165018999841176,0,0,6.42735719376638,0,0,0,0,0.107420244868274,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,1.5740617341532,0.6970372701606,0.616067160352178,0,0,0,0,0,0.632758849437452,3.43134349062885,0,1.28381696410176,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,1.00109485027145,0,0.278406173895242,0,0,0,0,0,2.05111450980652,0,0,0,0,0.296964680832639,0,2.98244294329889,2.53204949538923,0.445234820091624,0,36.7358210142709,0.796991953004279,0.276283915531148,0,0,2.46169610922139,0.311039587661807,0,0.537063524026827,0,0.690503839458535,0,0,0,2.50473865036998,1.99613798001194,0,0,2.89999830173917,0,0.254253650292766,0,11.3765313169683,1.16641845353302,0.347249989866585,11.5146380155799,6.99459344027366,36.6196167161,34.2795705786796,26.5992857058193,4.60709334023342,0,0,0.923403102045565,0.683652335082007,0,0,0,0,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,1.34802265961354,0,5.85661114313348,0,0,0,0,0,1.22429104652196,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,1.35588444468319,0,0,1.96263467463224,0,1.84365286578528,0.426905989478705,0,2.88180834308212,0,0,0,0,0,0,0,0,0.288950589901519,4.20294202096853,3.14882371451584,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0.201550417460179,1.44119953416961,0,0,0,0,0,0.0846733320657845,1.59045937961861,2.72406812223151,3.69732241469544,10.4529971813898,8.3088067605837,0,0,1.27574068981852,0,0,0.0524545881349981,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0,0,5.81773303626977,5.55376927319298,0,0.704815022316672,0.320362237703084,0,0,0,0,0,0,0,1.7548292581589,1.22538230705385,0,0,4.43034089983493,2.3184990331373,2.003054891304,5.73409195690071,5.32459447376891,3.22901295295194,0.553394539744923,0,0,0,0,7.49335849291011,9.56478788831446,1.34329322598187,1.16856654923612,0,0,1.25783950876288,4.44905610798268,0.228840068396924,2.41969478021182,1.08806040407946,0.443565449968902,1.11507737014592,0.899606224327209,0.155262956876259,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0,3.63697318405119,0.214821114084977,6.03243887842042,0.796191777397232,0,3.09056134664514,1.6837474438296,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,1.93561810612423,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0.895260599125562,0,0,0,0,0.212574920101683,0,0,0,0,8.0057074828547,0,0,3.3399197050159,0,2.07524016774297,3.28186182785208,7.31007919042983,1.72893131160545,2.42213468447777,0,0,0,0,0,0,0,0,0.82731361184183,0,0.781514011233092,0,0,0,1.41828927698629,2.34323429584154,1.86018116851066,1.45856363445986,4.92277328116398,0,2.48105589194647,0,0,1.07140367175657,0,8.49751845931284,6.60220354918763,0.177404740325278,2.88084968889448,0,6.45712463279901,1.90741043332262,0,0.333694205676207,0.39246546425257,5.81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| ||
|short_description=p1@KCND2 | |short_description=p1@KCND2 | ||
}} | }} |
Latest revision as of 21:01, 15 September 2015
Short description: | p1@KCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCND2_5end |
Coexpression cluster: | C710_anaplastic_cerebellum_xeroderma_B_carcinoid_merkel_occipital |
Association with transcript: | -485bp_to_ENST00000331113, NM_012281, uc003vjj.1_5end |
EntrezGene: | KCND2 |
HGNC: | 6238 |
UniProt: | Q9NZV8A4D0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.17e-07 | 5 |
neuronal stem cell | 8.04e-07 | 8 |