FFCP PHASE1:Hg19::chr3:147111231..147111281,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000472523_5end | |association_with_transcript=22bp_to_ENST00000472523_5end | ||
|cluster_id=chr3:147111231..147111281,+ | |||
|coexpression_cluster_id=C2723 | |coexpression_cluster_id=C2723 | ||
|description=CAGE_peak_3_at_ZIC1_5end | |description=CAGE_peak_3_at_ZIC1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!2.08e-12!25;CL:0000243!1.48e-09!15;CL:0000125!1.48e-09!15;CL:0000030!1.48e-09!15;CL:0000339!1.48e-09!15;CL:0002620!3.18e-09!23;CL:0000095!4.02e-09!17;CL:0000123!4.02e-09!17;CL:0000133!4.21e-09!59;CL:0000221!4.29e-07!71;CL:0000055!4.59e-07!180;CL:0000333!5.61e-07!41 | |ontology_enrichment_celltype=CL:0002319!2.08e-12!25;CL:0000243!1.48e-09!15;CL:0000125!1.48e-09!15;CL:0000030!1.48e-09!15;CL:0000339!1.48e-09!15;CL:0002620!3.18e-09!23;CL:0000095!4.02e-09!17;CL:0000123!4.02e-09!17;CL:0000133!4.21e-09!59;CL:0000221!4.29e-07!71;CL:0000055!4.59e-07!180;CL:0000333!5.61e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.91e-12;15!CL:0000125;3.91e-12;15!CL:0000095;8.89e-12;17!CL:0002319;1.25e-11;25!CL:0002620;2.52e-08;23!CL:0000128;6.16e-08;7!CL:0000126;6.16e-08;7!CL:0000127;6.16e-08;7 | |ontology_enrichment_celltype_v019=CL:0000243;3.91e-12;15!CL:0000125;3.91e-12;15!CL:0000095;8.89e-12;17!CL:0002319;1.25e-11;25!CL:0002620;2.52e-08;23!CL:0000128;6.16e-08;7!CL:0000126;6.16e-08;7!CL:0000127;6.16e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.91e-12,15;CL:0000125,2.91e-12,15;CL:0000030,2.91e-12,15;CL:0000339,2.91e-12,15;CL:0000095,7.95e-12,17;CL:0000123,7.95e-12,17;CL:0002319,1.15e-11,25;CL:0002620,2.36e-08,23;CL:0000133,3.30e-08,59;CL:0000128,4.78e-08,7;CL:0000126,4.78e-08,7;CL:0000127,4.78e-08,7;CL:0002453,4.78e-08,7;CL:0000221,2.22e-07,72;CL:0000333,2.58e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.91e-12;15!UBERON:0006601;2.14e-08;82!UBERON:0006238;3.90e-07;10 | |ontology_enrichment_development_v019=CL:0000339;3.91e-12;15!UBERON:0006601;2.14e-08;82!UBERON:0006238;3.90e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.03e-07;5!DOID:450;4.03e-07;5!DOID:66;4.03e-07;5!DOID:423;4.03e-07;5!DOID:0080000;4.03e-07;5!DOID:11722;4.03e-07;5 | |ontology_enrichment_disease_v019=DOID:17;4.03e-07;5!DOID:450;4.03e-07;5!DOID:66;4.03e-07;5!DOID:423;4.03e-07;5!DOID:0080000;4.03e-07;5!DOID:11722;4.03e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.00e-07,5;DOID:450,4.00e-07,5;DOID:66,4.00e-07,5;DOID:423,4.00e-07,5;DOID:0080000,4.00e-07,5;DOID:11722,4.00e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-47!82;UBERON:0000073!1.09e-46!94;UBERON:0001016!1.09e-46!94;UBERON:0005743!2.78e-45!86;UBERON:0000955!1.29e-39!69;UBERON:0006238!1.29e-39!69;UBERON:0002616!3.88e-35!59;UBERON:0001049!6.04e-33!57;UBERON:0005068!6.04e-33!57;UBERON:0006241!6.04e-33!57;UBERON:0007135!6.04e-33!57;UBERON:0004121!1.17e-26!169;UBERON:0003075!2.30e-26!86;UBERON:0007284!2.30e-26!86;UBERON:0000924!2.97e-25!173;UBERON:0006601!2.97e-25!173;UBERON:0002346!3.76e-24!90;UBERON:0002780!1.09e-21!41;UBERON:0001890!1.09e-21!41;UBERON:0006240!1.09e-21!41;UBERON:0000033!3.32e-21!123;UBERON:0003080!7.61e-21!42;UBERON:0000153!1.83e-20!129;UBERON:0007811!1.83e-20!129;UBERON:0003056!5.95e-19!61;UBERON:0001893!1.87e-17!34;UBERON:0002020!4.91e-17!34;UBERON:0003528!4.91e-17!34;UBERON:0002791!7.74e-17!33;UBERON:0001869!7.23e-16!32;UBERON:0003076!1.10e-13!15;UBERON:0003057!1.10e-13!15;UBERON:0007023!1.12e-13!115;UBERON:0000475!2.10e-13!365;UBERON:0004732!5.75e-12!13;UBERON:0004733!2.62e-11!12;UBERON:0002028!2.62e-11!12;UBERON:0007277!2.62e-11!12;UBERON:0000956!4.38e-11!25;UBERON:0000203!4.38e-11!25;UBERON:0002619!2.19e-09!22;UBERON:0002097!3.12e-09!40;UBERON:0002680!9.49e-09!9;UBERON:0001895!9.49e-09!9;UBERON:0010092!9.49e-09!9;UBERON:0000119!1.45e-08!312;UBERON:0001950!5.35e-08!20;UBERON:0002308!9.03e-08!9;UBERON:0000125!9.03e-08!9;UBERON:0000483!1.59e-07!309;UBERON:0002200!2.43e-07!11;UBERON:0006876!2.43e-07!11;UBERON:0002199!2.74e-07!45;UBERON:0002416!2.74e-07!45;UBERON:0002037!3.02e-07!6;UBERON:0006215!3.02e-07!6;UBERON:0009663!9.51e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!2.08e-47!82;UBERON:0000073!1.09e-46!94;UBERON:0001016!1.09e-46!94;UBERON:0005743!2.78e-45!86;UBERON:0000955!1.29e-39!69;UBERON:0006238!1.29e-39!69;UBERON:0002616!3.88e-35!59;UBERON:0001049!6.04e-33!57;UBERON:0005068!6.04e-33!57;UBERON:0006241!6.04e-33!57;UBERON:0007135!6.04e-33!57;UBERON:0004121!1.17e-26!169;UBERON:0003075!2.30e-26!86;UBERON:0007284!2.30e-26!86;UBERON:0000924!2.97e-25!173;UBERON:0006601!2.97e-25!173;UBERON:0002346!3.76e-24!90;UBERON:0002780!1.09e-21!41;UBERON:0001890!1.09e-21!41;UBERON:0006240!1.09e-21!41;UBERON:0000033!3.32e-21!123;UBERON:0003080!7.61e-21!42;UBERON:0000153!1.83e-20!129;UBERON:0007811!1.83e-20!129;UBERON:0003056!5.95e-19!61;UBERON:0001893!1.87e-17!34;UBERON:0002020!4.91e-17!34;UBERON:0003528!4.91e-17!34;UBERON:0002791!7.74e-17!33;UBERON:0001869!7.23e-16!32;UBERON:0003076!1.10e-13!15;UBERON:0003057!1.10e-13!15;UBERON:0007023!1.12e-13!115;UBERON:0000475!2.10e-13!365;UBERON:0004732!5.75e-12!13;UBERON:0004733!2.62e-11!12;UBERON:0002028!2.62e-11!12;UBERON:0007277!2.62e-11!12;UBERON:0000956!4.38e-11!25;UBERON:0000203!4.38e-11!25;UBERON:0002619!2.19e-09!22;UBERON:0002097!3.12e-09!40;UBERON:0002680!9.49e-09!9;UBERON:0001895!9.49e-09!9;UBERON:0010092!9.49e-09!9;UBERON:0000119!1.45e-08!312;UBERON:0001950!5.35e-08!20;UBERON:0002308!9.03e-08!9;UBERON:0000125!9.03e-08!9;UBERON:0000483!1.59e-07!309;UBERON:0002200!2.43e-07!11;UBERON:0006876!2.43e-07!11;UBERON:0002199!2.74e-07!45;UBERON:0002416!2.74e-07!45;UBERON:0002037!3.02e-07!6;UBERON:0006215!3.02e-07!6;UBERON:0009663!9.51e-07!7 | ||
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| ||
|short_description=p3@ZIC1 | |short_description=p3@ZIC1 | ||
}} | }} |
Latest revision as of 18:06, 15 September 2015
Short description: | p3@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZIC1_5end |
Coexpression cluster: | C2723_Pericytes_Meningeal_Smooth_Fibroblast_cerebellum_Hair_rhabdomyosarcoma |
Association with transcript: | 22bp_to_ENST00000472523_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.91e-12 | 15 |
glial cell | 2.91e-12 | 15 |
glioblast | 2.91e-12 | 15 |
glioblast (sensu Vertebrata) | 2.91e-12 | 15 |
neuron associated cell | 7.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 7.95e-12 | 17 |
neural cell | 1.15e-11 | 25 |
skin fibroblast | 2.36e-08 | 23 |
neurectodermal cell | 3.30e-08 | 59 |
oligodendrocyte | 4.78e-08 | 7 |
macroglial cell | 4.78e-08 | 7 |
astrocyte | 4.78e-08 | 7 |
oligodendrocyte precursor cell | 4.78e-08 | 7 |
ectodermal cell | 2.22e-07 | 72 |
migratory neural crest cell | 2.58e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.00e-07 | 5 |
myotonic disease | 4.00e-07 | 5 |
muscle tissue disease | 4.00e-07 | 5 |
myopathy | 4.00e-07 | 5 |
muscular disease | 4.00e-07 | 5 |
myotonic dystrophy | 4.00e-07 | 5 |