FFCP PHASE1:Mm9::chr16:34081979..34082024,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:34081979..34082024,- | |||
|description=CAGE_peak_at_chr16:34081979..34082024,- | |description=CAGE_peak_at_chr16:34081979..34082024,- | ||
|id=chr16:34081979..34082024,- | |id=chr16:34081979..34082024,- | ||
|ontology_enrichment_celltype=CL:0000239!1.12e-11!6;CL:0000677!1.12e-11!6;CL:0000212!1.12e-11!6;CL:0000584!1.12e-11!6;CL:0000075!7.37e-10!7;CL:0002563!1.09e-09!9;CL:0002251!1.09e-09!9;CL:0000066!5.67e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.94e-21,6;CL:0000677,3.94e-21,6;CL:0000584,3.94e-21,6;CL:0000075,4.90e-18,7;CL:0002563,6.65e-14,9;CL:0002251,6.65e-14,9;CL:0000682,1.72e-11,3;CL:0000066,3.07e-10,25;CL:0002076,4.20e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.87e-19!15;UBERON:0000160!4.10e-17!43;UBERON:0004923!2.02e-16!24;UBERON:0001242!9.69e-16!13;UBERON:0000060!9.69e-16!13;UBERON:0001262!9.69e-16!13;UBERON:0004786!9.69e-16!13;UBERON:0005409!3.21e-13!59;UBERON:0003350!1.09e-09!9;UBERON:0004808!1.09e-09!9;UBERON:0001277!1.09e-09!9;UBERON:0000485!1.11e-07!11;UBERON:0004119!6.20e-07!130;UBERON:0000925!6.20e-07!130;UBERON:0006595!6.20e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.32e-33,31;UBERON:0000344,6.90e-32,15;UBERON:0001242,3.26e-25,13;UBERON:0001262,3.26e-25,13;UBERON:0004786,3.26e-25,13;UBERON:0005409,4.22e-23,47;UBERON:0004923,2.62e-22,24;UBERON:0003350,6.65e-14,9;UBERON:0004808,6.65e-14,9;UBERON:0001277,6.65e-14,9;UBERON:0002108,2.55e-13,4;UBERON:0000485,2.86e-11,11;UBERON:0000331,1.96e-10,3;UBERON:0002116,1.96e-10,3;UBERON:0001204,1.96e-10,3;UBERON:0001168,1.96e-10,3;UBERON:0004119,2.51e-10,118;UBERON:0000925,2.51e-10,118;UBERON:0006595,2.51e-10,118;UBERON:0001007,1.91e-09,116;UBERON:0001555,1.91e-09,116;UBERON:0007026,1.91e-09,116;UBERON:0001962,1.27e-08,2;UBERON:0001961,1.27e-08,2;UBERON:0001744,1.27e-08,2;UBERON:0001155,4.00e-08,2;UBERON:0000059,4.00e-08,2;UBERON:0004921,2.27e-07,114 | |||
|phase1_expression=0,27.9180326111489,26.8449551239826,12.7034968748869,19.0340377379612,3.69334398206158,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0390983124154,19.0409703285751,17.8011908875656,9.90752591165872,15.7293999860699,6.84084310042946,6.30075324399827,5.09980174507201,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,18.6391761218122,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0,0,12.5559137533843,8.46241813323342,0,0.232236671860439,0,0,0,0,4.2707615539006,0.494096864172033,0,0.198956472041151,0.38992817423824,15.2799299471218,8.42938394511308,10.1562049359727,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.90648863777438,0,0.16488625294148,0,0.0603129249281559,0.358117032009409,0.164140899745061,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41326727862668,0,7.64728342421578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,27.9180326111489,26.8449551239826,12.7034968748869,19.0340377379612,3.69334398206158,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0390983124154,19.0409703285751,17.8011908875656,9.90752591165872,15.7293999860699,6.84084310042946,6.30075324399827,5.09980174507201,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,18.6391761218122,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0,0,12.5559137533843,8.46241813323342,0,0.232236671860439,0,0,0,0,4.2707615539006,0.494096864172033,0,0.198956472041151,0.38992817423824,15.2799299471218,8.42938394511308,10.1562049359727,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.90648863777438,0,0.16488625294148,0,0.0603129249281559,0.358117032009409,0.164140899745061,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41326727862668,0,7.64728342421578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:34081979..34082024,- | |short_description=p@chr16:34081979..34082024,- | ||
}} | }} |
Latest revision as of 08:34, 6 August 2015
Short description: | p@chr16:34081979..34082024, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:34081979..34082024, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.94e-21 | 6 |
gut absorptive cell | 3.94e-21 | 6 |
enterocyte | 3.94e-21 | 6 |
columnar/cuboidal epithelial cell | 4.90e-18 | 7 |
intestinal epithelial cell | 6.65e-14 | 9 |
epithelial cell of alimentary canal | 6.65e-14 | 9 |
M cell of gut | 1.72e-11 | 3 |
epithelial cell | 3.07e-10 | 25 |
endo-epithelial cell | 4.20e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.32e-33 | 31 |
mucosa | 6.90e-32 | 15 |
intestinal mucosa | 3.26e-25 | 13 |
wall of intestine | 3.26e-25 | 13 |
gastrointestinal system mucosa | 3.26e-25 | 13 |
gastrointestinal system | 4.22e-23 | 47 |
organ component layer | 2.62e-22 | 24 |
epithelium of mucosa | 6.65e-14 | 9 |
gastrointestinal system epithelium | 6.65e-14 | 9 |
intestinal epithelium | 6.65e-14 | 9 |
small intestine | 2.55e-13 | 4 |
simple columnar epithelium | 2.86e-11 | 11 |
ileal mucosa | 1.96e-10 | 3 |
ileum | 1.96e-10 | 3 |
mucosa of small intestine | 1.96e-10 | 3 |
wall of small intestine | 1.96e-10 | 3 |
endoderm-derived structure | 2.51e-10 | 118 |
endoderm | 2.51e-10 | 118 |
presumptive endoderm | 2.51e-10 | 118 |
digestive system | 1.91e-09 | 116 |
digestive tract | 1.91e-09 | 116 |
primitive gut | 1.91e-09 | 116 |
gut-associated lymphoid tissue | 1.27e-08 | 2 |
mucosa-associated lymphoid tissue | 1.27e-08 | 2 |
lymphoid tissue | 1.27e-08 | 2 |
colon | 4.00e-08 | 2 |
large intestine | 4.00e-08 | 2 |
subdivision of digestive tract | 2.27e-07 | 114 |