FFCP PHASE1:Mm9::chr11:60201692..60201715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1054 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60201692..60201715,+ | |||
|description=CAGE_peak_at_chr11:60201692..60201715,+ | |description=CAGE_peak_at_chr11:60201692..60201715,+ | ||
|id=chr11:60201692..60201715,+ | |id=chr11:60201692..60201715,+ | ||
|ontology_enrichment_celltype=CL:0000239!4.40e-07!6;CL:0000677!4.40e-07!6;CL:0000212!4.40e-07!6;CL:0000584!4.40e-07!6 | |ontology_enrichment_celltype=CL:0000239!4.40e-07!6;CL:0000677!4.40e-07!6;CL:0000212!4.40e-07!6;CL:0000584!4.40e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.14e-08,6;CL:0000677,1.14e-08,6;CL:0000584,1.14e-08,6;CL:0000075,1.93e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.32e-21!43;UBERON:0005409!1.02e-17!59;UBERON:0000344!7.39e-12!15;UBERON:0001242!3.19e-09!13;UBERON:0000060!3.19e-09!13;UBERON:0001262!3.19e-09!13;UBERON:0004786!3.19e-09!13 | |ontology_enrichment_uberon=UBERON:0000160!1.32e-21!43;UBERON:0005409!1.02e-17!59;UBERON:0000344!7.39e-12!15;UBERON:0001242!3.19e-09!13;UBERON:0000060!3.19e-09!13;UBERON:0001262!3.19e-09!13;UBERON:0004786!3.19e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-47,31;UBERON:0005409,8.37e-33,47;UBERON:0000344,6.80e-16,15;UBERON:0001007,3.50e-13,116;UBERON:0001555,3.50e-13,116;UBERON:0007026,3.50e-13,116;UBERON:0004119,7.05e-13,118;UBERON:0000925,7.05e-13,118;UBERON:0006595,7.05e-13,118;UBERON:0001242,2.70e-11,13;UBERON:0001262,2.70e-11,13;UBERON:0004786,2.70e-11,13;UBERON:0004921,6.54e-11,114;UBERON:0004923,2.23e-09,24;UBERON:0001155,5.02e-08,2;UBERON:0000059,5.02e-08,2;UBERON:0002108,9.84e-08,4;UBERON:0001962,2.63e-07,2;UBERON:0001961,2.63e-07,2;UBERON:0001744,2.63e-07,2 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,4.23449895829562,9.01612313903425,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,3.44113921600755,1.72269589234506,0.86152399231815,1.50829862880122,3.6104449696711,1.26015064879965,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,21.9493970330742,0,0,0.644337306610467,3.22693639397348,4.89231696458715,3.80451252225118,7.59246498471219,1.81168850196412,1.25667604400135,2.38747766449381,2.33956904542944,6.29173586057955,4.32276099749388,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.87345025498471,0,0,0,3.75883422546199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.824140228955577,0.64183841918363,0.505394423527595,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0.355905054372522,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.36499771816861,4.23449895829562,9.01612313903425,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,3.44113921600755,1.72269589234506,0.86152399231815,1.50829862880122,3.6104449696711,1.26015064879965,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,21.9493970330742,0,0,0.644337306610467,3.22693639397348,4.89231696458715,3.80451252225118,7.59246498471219,1.81168850196412,1.25667604400135,2.38747766449381,2.33956904542944,6.29173586057955,4.32276099749388,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.87345025498471,0,0,0,3.75883422546199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.824140228955577,0.64183841918363,0.505394423527595,0,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0.355905054372522,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr11:60201692..60201715,+ | |short_description=p@chr11:60201692..60201715,+ | ||
}} | }} |
Latest revision as of 05:28, 6 August 2015
Short description: | p@chr11:60201692..60201715, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:60201692..60201715, + |
Coexpression cluster: | MCL_coexpression_mm9:1054 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.14e-08 | 6 |
gut absorptive cell | 1.14e-08 | 6 |
enterocyte | 1.14e-08 | 6 |
columnar/cuboidal epithelial cell | 1.93e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.96e-47 | 31 |
gastrointestinal system | 8.37e-33 | 47 |
mucosa | 6.80e-16 | 15 |
digestive system | 3.50e-13 | 116 |
digestive tract | 3.50e-13 | 116 |
primitive gut | 3.50e-13 | 116 |
endoderm-derived structure | 7.05e-13 | 118 |
endoderm | 7.05e-13 | 118 |
presumptive endoderm | 7.05e-13 | 118 |
intestinal mucosa | 2.70e-11 | 13 |
wall of intestine | 2.70e-11 | 13 |
gastrointestinal system mucosa | 2.70e-11 | 13 |
subdivision of digestive tract | 6.54e-11 | 114 |
organ component layer | 2.23e-09 | 24 |
colon | 5.02e-08 | 2 |
large intestine | 5.02e-08 | 2 |
small intestine | 9.84e-08 | 4 |
gut-associated lymphoid tissue | 2.63e-07 | 2 |
mucosa-associated lymphoid tissue | 2.63e-07 | 2 |
lymphoid tissue | 2.63e-07 | 2 |