FFCP PHASE1:Mm9::chr11:58426058..58426084,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=54 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58426058..58426084,- | |||
|description=CAGE_peak_at_chr11:58426058..58426084,- | |description=CAGE_peak_at_chr11:58426058..58426084,- | ||
|id=chr11:58426058..58426084,- | |id=chr11:58426058..58426084,- | ||
|ontology_enrichment_celltype=CL:0002563!1.01e-11!9;CL:0002251!1.01e-11!9;CL:0000239!2.14e-07!6;CL:0000677!2.14e-07!6;CL:0000212!2.14e-07!6;CL:0000584!2.14e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.01e-11!9;CL:0002251!1.01e-11!9;CL:0000239!2.14e-07!6;CL:0000677!2.14e-07!6;CL:0000212!2.14e-07!6;CL:0000584!2.14e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.30e-23!59;UBERON:0000344!4.69e-18!15;UBERON:0000160!5.85e-17!43;UBERON:0001242!8.91e-15!13;UBERON:0000060!8.91e-15!13;UBERON:0001262!8.91e-15!13;UBERON:0004786!8.91e-15!13;UBERON:0003350!1.01e-11!9;UBERON:0004808!1.01e-11!9;UBERON:0001277!1.01e-11!9;UBERON:0004923!1.30e-11!24;UBERON:0004119!1.66e-09!130;UBERON:0000925!1.66e-09!130;UBERON:0006595!1.66e-09!130;UBERON:0000485!2.68e-09!11;UBERON:0001007!4.77e-09!128;UBERON:0001555!4.77e-09!128;UBERON:0007026!4.77e-09!128;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!6.30e-23!59;UBERON:0000344!4.69e-18!15;UBERON:0000160!5.85e-17!43;UBERON:0001242!8.91e-15!13;UBERON:0000060!8.91e-15!13;UBERON:0001262!8.91e-15!13;UBERON:0004786!8.91e-15!13;UBERON:0003350!1.01e-11!9;UBERON:0004808!1.01e-11!9;UBERON:0001277!1.01e-11!9;UBERON:0004923!1.30e-11!24;UBERON:0004119!1.66e-09!130;UBERON:0000925!1.66e-09!130;UBERON:0006595!1.66e-09!130;UBERON:0000485!2.68e-09!11;UBERON:0001007!4.77e-09!128;UBERON:0001555!4.77e-09!128;UBERON:0007026!4.77e-09!128;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.04e-32,47;UBERON:0000160,2.22e-25,31;UBERON:0000344,5.39e-17,15;UBERON:0001007,2.41e-13,116;UBERON:0001555,2.41e-13,116;UBERON:0007026,2.41e-13,116;UBERON:0004119,4.79e-13,118;UBERON:0000925,4.79e-13,118;UBERON:0006595,4.79e-13,118;UBERON:0001242,6.61e-12,13;UBERON:0001262,6.61e-12,13;UBERON:0004786,6.61e-12,13;UBERON:0004921,6.41e-11,114;UBERON:0004923,4.33e-10,24;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0001962,5.10e-08,2;UBERON:0001961,5.10e-08,2;UBERON:0001744,5.10e-08,2;UBERON:0001155,7.59e-08,2;UBERON:0000059,7.59e-08,2;UBERON:0000945,1.02e-07,16;UBERON:0010039,1.02e-07,16;UBERON:0000485,1.82e-07,11 | |||
|phase1_expression=0,0.348975407639361,0,4.23449895829562,1.50268718983904,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,5.75972722056264,3.44113921600755,1.14846392823004,0.86152399231815,1.29282739611533,0.570070258369122,1.00812051903972,0,0,0,0,1.1554064790051,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,0,7.59963200862735,1.05780226665418,0,0,0,0,0,0,8.54152310780121,0.329397909448022,0.251335208800269,0.795825888164603,1.16978452271472,6.29173586057955,4.75503709724327,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.441056796109924,0,0,0,0,0,5.82961673259701,0,0,0,0,0,0,0,0,0,0,32.4588010125139,0,0,0.216010681643603,1.04544148007234,3.49380101993884,14.295620716791,10.0010681427656,21.2022313007064,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,4.23449895829562,1.50268718983904,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,5.75972722056264,3.44113921600755,1.14846392823004,0.86152399231815,1.29282739611533,0.570070258369122,1.00812051903972,0,0,0,0,1.1554064790051,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,0,7.59963200862735,1.05780226665418,0,0,0,0,0,0,8.54152310780121,0.329397909448022,0.251335208800269,0.795825888164603,1.16978452271472,6.29173586057955,4.75503709724327,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.441056796109924,0,0,0,0,0,5.82961673259701,0,0,0,0,0,0,0,0,0,0,32.4588010125139,0,0,0.216010681643603,1.04544148007234,3.49380101993884,14.295620716791,10.0010681427656,21.2022313007064,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:58426058..58426084,- | |short_description=p@chr11:58426058..58426084,- | ||
}} | }} |
Latest revision as of 04:16, 6 August 2015
Short description: | p@chr11:58426058..58426084, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58426058..58426084, - |
Coexpression cluster: | MCL_coexpression_mm9:54 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.54e-09 | 9 |
epithelial cell of alimentary canal | 3.54e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.04e-32 | 47 |
intestine | 2.22e-25 | 31 |
mucosa | 5.39e-17 | 15 |
digestive system | 2.41e-13 | 116 |
digestive tract | 2.41e-13 | 116 |
primitive gut | 2.41e-13 | 116 |
endoderm-derived structure | 4.79e-13 | 118 |
endoderm | 4.79e-13 | 118 |
presumptive endoderm | 4.79e-13 | 118 |
intestinal mucosa | 6.61e-12 | 13 |
wall of intestine | 6.61e-12 | 13 |
gastrointestinal system mucosa | 6.61e-12 | 13 |
subdivision of digestive tract | 6.41e-11 | 114 |
organ component layer | 4.33e-10 | 24 |
epithelium of mucosa | 3.54e-09 | 9 |
gastrointestinal system epithelium | 3.54e-09 | 9 |
intestinal epithelium | 3.54e-09 | 9 |
gut-associated lymphoid tissue | 5.10e-08 | 2 |
mucosa-associated lymphoid tissue | 5.10e-08 | 2 |
lymphoid tissue | 5.10e-08 | 2 |
colon | 7.59e-08 | 2 |
large intestine | 7.59e-08 | 2 |
stomach | 1.02e-07 | 16 |
food storage organ | 1.02e-07 | 16 |
simple columnar epithelium | 1.82e-07 | 11 |