FFCP PHASE1:Mm9::chr6:78321784..78321820,+: Difference between revisions
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|id=chr6:78321784..78321820,+
|short_description=p@chr6:78321784..78321820,+
|description=CAGE_peak_at_chr6:78321784..78321820,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=757 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78321784..78321820,+ | |||
|description=CAGE_peak_at_chr6:78321784..78321820,+ | |||
|id=chr6:78321784..78321820,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.82e-17!9;CL:0002251!4.82e-17!9;CL:0000239!1.78e-15!6;CL:0000677!1.78e-15!6;CL:0000212!1.78e-15!6;CL:0000584!1.78e-15!6;CL:0000075!3.59e-13!7;CL:0000066!1.42e-10!25;CL:0002076!1.03e-09!15;CL:0000473!4.24e-09!3;CL:0000627!4.24e-09!3;CL:0000682!4.24e-09!3;CL:0000223!5.74e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.15e-20,6;CL:0000677,9.15e-20,6;CL:0000584,9.15e-20,6;CL:0000075,7.12e-17,7;CL:0002563,5.16e-13,9;CL:0002251,5.16e-13,9;CL:0000682,2.02e-11,3;CL:0000066,9.38e-10,25;CL:0002076,1.36e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.51e-33!43;UBERON:0000344!7.83e-32!15;UBERON:0001242!2.91e-27!13;UBERON:0000060!2.91e-27!13;UBERON:0001262!2.91e-27!13;UBERON:0004786!2.91e-27!13;UBERON:0005409!5.93e-25!59;UBERON:0004923!1.03e-18!24;UBERON:0003350!4.82e-17!9;UBERON:0004808!4.82e-17!9;UBERON:0001277!4.82e-17!9;UBERON:0000485!1.04e-13!11;UBERON:0001007!2.29e-10!128;UBERON:0001555!2.29e-10!128;UBERON:0007026!2.29e-10!128;UBERON:0004119!4.10e-10!130;UBERON:0000925!4.10e-10!130;UBERON:0006595!4.10e-10!130;UBERON:0002108!1.38e-09!16;UBERON:0000331!1.56e-09!3;UBERON:0002116!1.56e-09!3;UBERON:0001204!1.56e-09!3;UBERON:0001168!1.56e-09!3;UBERON:0004921!1.20e-08!126;UBERON:0004185!1.20e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.18e-33,31;UBERON:0000344,5.22e-31,15;UBERON:0001242,2.89e-25,13;UBERON:0001262,2.89e-25,13;UBERON:0004786,2.89e-25,13;UBERON:0005409,7.56e-21,47;UBERON:0004923,1.49e-18,24;UBERON:0002108,5.02e-15,4;UBERON:0003350,5.16e-13,9;UBERON:0004808,5.16e-13,9;UBERON:0001277,5.16e-13,9;UBERON:0000331,5.49e-12,3;UBERON:0002116,5.49e-12,3;UBERON:0001204,5.49e-12,3;UBERON:0001168,5.49e-12,3;UBERON:0000485,1.49e-10,11;UBERON:0001007,2.79e-08,116;UBERON:0001555,2.79e-08,116;UBERON:0007026,2.79e-08,116;UBERON:0004119,4.49e-08,118;UBERON:0000925,4.49e-08,118;UBERON:0006595,4.49e-08,118;UBERON:0001155,7.59e-08,2;UBERON:0000059,7.59e-08,2;UBERON:0001962,1.93e-07,2;UBERON:0001961,1.93e-07,2;UBERON:0001744,1.93e-07,2 | |||
|phase1_expression=0,18.1467211972468,28.6649520815408,8.46899791659124,11.0197060588196,1.51091344720701,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,7.34109699414944,36.1766137392463,31.0148637234534,20.6852383378453,92.1613584363413,39.5687303723091,86.2531686449135,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,41.894957054209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5559137533843,72.9883563991382,0,0,0,0,0,0,99.1765738628029,0,0.251335208800269,0,0,104.26305140389,7.3486936957396,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0.727067458955011,0,0.632073515871632,33.7339547439996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,18.1467211972468,28.6649520815408,8.46899791659124,11.0197060588196,1.51091344720701,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,7.34109699414944,36.1766137392463,31.0148637234534,20.6852383378453,92.1613584363413,39.5687303723091,86.2531686449135,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,41.894957054209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5559137533843,72.9883563991382,0,0,0,0,0,0,99.1765738628029,0,0.251335208800269,0,0,104.26305140389,7.3486936957396,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0.727067458955011,0,0.632073515871632,33.7339547439996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr6:78321784..78321820,+ | |||
}} | }} |
Latest revision as of 03:28, 6 August 2015
Short description: | p@chr6:78321784..78321820, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321784..78321820, + |
Coexpression cluster: | MCL_coexpression_mm9:757 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.15e-20 | 6 |
gut absorptive cell | 9.15e-20 | 6 |
enterocyte | 9.15e-20 | 6 |
columnar/cuboidal epithelial cell | 7.12e-17 | 7 |
intestinal epithelial cell | 5.16e-13 | 9 |
epithelial cell of alimentary canal | 5.16e-13 | 9 |
M cell of gut | 2.02e-11 | 3 |
epithelial cell | 9.38e-10 | 25 |
endo-epithelial cell | 1.36e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.18e-33 | 31 |
mucosa | 5.22e-31 | 15 |
intestinal mucosa | 2.89e-25 | 13 |
wall of intestine | 2.89e-25 | 13 |
gastrointestinal system mucosa | 2.89e-25 | 13 |
gastrointestinal system | 7.56e-21 | 47 |
organ component layer | 1.49e-18 | 24 |
small intestine | 5.02e-15 | 4 |
epithelium of mucosa | 5.16e-13 | 9 |
gastrointestinal system epithelium | 5.16e-13 | 9 |
intestinal epithelium | 5.16e-13 | 9 |
ileal mucosa | 5.49e-12 | 3 |
ileum | 5.49e-12 | 3 |
mucosa of small intestine | 5.49e-12 | 3 |
wall of small intestine | 5.49e-12 | 3 |
simple columnar epithelium | 1.49e-10 | 11 |
digestive system | 2.79e-08 | 116 |
digestive tract | 2.79e-08 | 116 |
primitive gut | 2.79e-08 | 116 |
endoderm-derived structure | 4.49e-08 | 118 |
endoderm | 4.49e-08 | 118 |
presumptive endoderm | 4.49e-08 | 118 |
colon | 7.59e-08 | 2 |
large intestine | 7.59e-08 | 2 |
gut-associated lymphoid tissue | 1.93e-07 | 2 |
mucosa-associated lymphoid tissue | 1.93e-07 | 2 |
lymphoid tissue | 1.93e-07 | 2 |