FFCP PHASE1:Mm9::chr15:89140401..89140433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89140401..89140433,- | |||
|description=CAGE_peak_at_chr15:89140401..89140433,- | |description=CAGE_peak_at_chr15:89140401..89140433,- | ||
|id=chr15:89140401..89140433,- | |id=chr15:89140401..89140433,- | ||
|ontology_enrichment_celltype=CL:0000084!2.71e-11!11;CL:0000827!2.71e-11!11;CL:0000791!5.79e-11!9;CL:0000789!5.79e-11!9;CL:0002420!5.79e-11!9;CL:0002419!5.79e-11!9;CL:0000790!5.79e-11!9;CL:0000838!3.23e-10!12;CL:0002031!2.56e-09!25;CL:0000542!2.63e-09!13;CL:0000051!2.63e-09!13;CL:0000624!3.96e-09!8;CL:0000988!6.61e-08!32;CL:0002032!6.61e-08!32;CL:0000037!6.61e-08!32;CL:0000566!6.61e-08!32;CL:0000837!6.61e-08!32;CL:0000738!9.56e-07!17;CL:0002087!9.56e-07!17 | |ontology_enrichment_celltype=CL:0000084!2.71e-11!11;CL:0000827!2.71e-11!11;CL:0000791!5.79e-11!9;CL:0000789!5.79e-11!9;CL:0002420!5.79e-11!9;CL:0002419!5.79e-11!9;CL:0000790!5.79e-11!9;CL:0000838!3.23e-10!12;CL:0002031!2.56e-09!25;CL:0000542!2.63e-09!13;CL:0000051!2.63e-09!13;CL:0000624!3.96e-09!8;CL:0000988!6.61e-08!32;CL:0002032!6.61e-08!32;CL:0000037!6.61e-08!32;CL:0000566!6.61e-08!32;CL:0000837!6.61e-08!32;CL:0000738!9.56e-07!17;CL:0002087!9.56e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.38e-22,9;CL:0000789,1.38e-22,9;CL:0002420,1.38e-22,9;CL:0002419,1.38e-22,9;CL:0000790,1.38e-22,9;CL:0000084,1.64e-18,11;CL:0000827,1.64e-18,11;CL:0000838,5.57e-17,12;CL:0000624,1.39e-16,8;CL:0000542,1.10e-15,13;CL:0000051,1.10e-15,13;CL:0000738,5.16e-12,17;CL:0002087,5.16e-12,17;CL:0000815,1.44e-09,1;CL:0000792,1.44e-09,1;CL:0000625,2.09e-09,1;CL:0002031,3.55e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!3.89e-24!24;UBERON:0002370!2.03e-22!23;UBERON:0000974!2.03e-22!23;UBERON:0004807!2.03e-22!23;UBERON:0005058!2.03e-22!23;UBERON:0003351!2.03e-22!23;UBERON:0009113!2.03e-22!23;UBERON:0003295!2.03e-22!23;UBERON:0009722!2.03e-22!23;UBERON:0005562!2.03e-22!23;UBERON:0007690!2.03e-22!23;UBERON:0006562!2.72e-21!24;UBERON:0001557!2.72e-21!24;UBERON:0001042!2.72e-21!24;UBERON:0008814!2.72e-21!24;UBERON:0009145!2.72e-21!24;UBERON:0004177!3.11e-21!29;UBERON:0000072!2.05e-18!27;UBERON:0002193!9.32e-17!48;UBERON:0002390!1.52e-16!45;UBERON:0003061!1.52e-16!45;UBERON:0000063!3.59e-13!35;UBERON:0001004!4.16e-13!42;UBERON:0000065!6.35e-12!41;UBERON:0005057!4.21e-11!51;UBERON:0002405!1.20e-10!70;UBERON:0003081!7.62e-09!88;UBERON:0002530!1.26e-08!65;UBERON:0003929!9.14e-08!55;UBERON:0002368!1.27e-07!60 | |ontology_enrichment_uberon=UBERON:0003408!3.89e-24!24;UBERON:0002370!2.03e-22!23;UBERON:0000974!2.03e-22!23;UBERON:0004807!2.03e-22!23;UBERON:0005058!2.03e-22!23;UBERON:0003351!2.03e-22!23;UBERON:0009113!2.03e-22!23;UBERON:0003295!2.03e-22!23;UBERON:0009722!2.03e-22!23;UBERON:0005562!2.03e-22!23;UBERON:0007690!2.03e-22!23;UBERON:0006562!2.72e-21!24;UBERON:0001557!2.72e-21!24;UBERON:0001042!2.72e-21!24;UBERON:0008814!2.72e-21!24;UBERON:0009145!2.72e-21!24;UBERON:0004177!3.11e-21!29;UBERON:0000072!2.05e-18!27;UBERON:0002193!9.32e-17!48;UBERON:0002390!1.52e-16!45;UBERON:0003061!1.52e-16!45;UBERON:0000063!3.59e-13!35;UBERON:0001004!4.16e-13!42;UBERON:0000065!6.35e-12!41;UBERON:0005057!4.21e-11!51;UBERON:0002405!1.20e-10!70;UBERON:0003081!7.62e-09!88;UBERON:0002530!1.26e-08!65;UBERON:0003929!9.14e-08!55;UBERON:0002368!1.27e-07!60 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.53e-21,23;UBERON:0000974,1.53e-21,23;UBERON:0004807,1.53e-21,23;UBERON:0005058,1.53e-21,23;UBERON:0003351,1.53e-21,23;UBERON:0009113,1.53e-21,23;UBERON:0003295,1.53e-21,23;UBERON:0009722,1.53e-21,23;UBERON:0005562,1.53e-21,23;UBERON:0007690,1.53e-21,23;UBERON:0006562,1.25e-20,24;UBERON:0003408,1.25e-20,24;UBERON:0001557,1.25e-20,24;UBERON:0001042,1.25e-20,24;UBERON:0008814,1.25e-20,24;UBERON:0009145,1.25e-20,24;UBERON:0000072,2.71e-18,27;UBERON:0004177,5.29e-17,29;UBERON:0005057,5.29e-17,29;UBERON:0000077,5.18e-14,35;UBERON:0007811,1.31e-13,36;UBERON:0000065,6.86e-12,41;UBERON:0001004,1.35e-11,42;UBERON:0000153,2.59e-11,43;UBERON:0002390,8.70e-11,45;UBERON:0003061,8.70e-11,45;UBERON:0002193,4.44e-10,48;UBERON:0002405,4.44e-10,48;UBERON:0003929,1.00e-08,55;UBERON:0002368,6.00e-08,60;UBERON:0002530,2.73e-07,65;UBERON:0000490,3.60e-07,66;UBERON:0005911,7.87e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.140788722151667,0.468129052643987,0,0,1.88320802924326,1.92324885321794,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0.510259740906419,0.496454756004426,0,0,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27338845544205,0.228778173206523,0,0.69975726161829,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.576060012515731,1.26404448251271,0.202725215290164,0,0.649604114888975,0.179026695667481,0.39736270956253,0.961563596159751,0.590758108698309,1.21159739937777,1.06689529317,1.00826185136841,0.682205165178267,2.11666051608725,3.62318396762864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.140788722151667,0.468129052643987,0,0,1.88320802924326,1.92324885321794,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0.510259740906419,0.496454756004426,0,0,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27338845544205,0.228778173206523,0,0.69975726161829,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.576060012515731,1.26404448251271,0.202725215290164,0,0.649604114888975,0.179026695667481,0.39736270956253,0.961563596159751,0.590758108698309,1.21159739937777,1.06689529317,1.00826185136841,0.682205165178267,2.11666051608725,3.62318396762864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:89140401..89140433,- | |short_description=p@chr15:89140401..89140433,- | ||
}} | }} |
Latest revision as of 20:00, 5 August 2015
Short description: | p@chr15:89140401..89140433, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:89140401..89140433, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.38e-22 | 9 |
alpha-beta T cell | 1.38e-22 | 9 |
immature T cell | 1.38e-22 | 9 |
mature T cell | 1.38e-22 | 9 |
immature alpha-beta T cell | 1.38e-22 | 9 |
T cell | 1.64e-18 | 11 |
pro-T cell | 1.64e-18 | 11 |
lymphoid lineage restricted progenitor cell | 5.57e-17 | 12 |
CD4-positive, alpha-beta T cell | 1.39e-16 | 8 |
lymphocyte | 1.10e-15 | 13 |
common lymphoid progenitor | 1.10e-15 | 13 |
leukocyte | 5.16e-12 | 17 |
nongranular leukocyte | 5.16e-12 | 17 |
regulatory T cell | 1.44e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.44e-09 | 1 |
CD8-positive, alpha-beta T cell | 2.09e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 3.55e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.53e-21 | 23 |
neck | 1.53e-21 | 23 |
respiratory system epithelium | 1.53e-21 | 23 |
hemolymphoid system gland | 1.53e-21 | 23 |
pharyngeal epithelium | 1.53e-21 | 23 |
thymic region | 1.53e-21 | 23 |
pharyngeal gland | 1.53e-21 | 23 |
entire pharyngeal arch endoderm | 1.53e-21 | 23 |
thymus primordium | 1.53e-21 | 23 |
early pharyngeal endoderm | 1.53e-21 | 23 |
pharynx | 1.25e-20 | 24 |
gland of gut | 1.25e-20 | 24 |
upper respiratory tract | 1.25e-20 | 24 |
chordate pharynx | 1.25e-20 | 24 |
pharyngeal arch system | 1.25e-20 | 24 |
pharyngeal region of foregut | 1.25e-20 | 24 |
segment of respiratory tract | 2.71e-18 | 27 |
hemopoietic organ | 5.29e-17 | 29 |
immune organ | 5.29e-17 | 29 |
mixed endoderm/mesoderm-derived structure | 5.18e-14 | 35 |
craniocervical region | 1.31e-13 | 36 |
respiratory tract | 6.86e-12 | 41 |
respiratory system | 1.35e-11 | 42 |
anterior region of body | 2.59e-11 | 43 |
hematopoietic system | 8.70e-11 | 45 |
blood island | 8.70e-11 | 45 |
hemolymphoid system | 4.44e-10 | 48 |
immune system | 4.44e-10 | 48 |
gut epithelium | 1.00e-08 | 55 |
endocrine gland | 6.00e-08 | 60 |
gland | 2.73e-07 | 65 |
unilaminar epithelium | 3.60e-07 | 66 |
endo-epithelium | 7.87e-07 | 69 |