FFCP PHASE1:Mm9::chr2:91024134..91024180,-: Difference between revisions
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{{FFCP|EntrezGene=228355|HGNC=|MCL_coexpression_id=36|UniProt=A2AGQ4,Q80U28,A2AGQ5,A2AGQ7,A2AGQ9,A2AGQ2,Q99LH6|association_with_transcript=-109bp_to_NM_001177721,NM_001177722,NM_001177723,NM_001177724,NM_001177725,NM_001177726,NM_001177727,NM_001177728,NM_001177729,uc008kuv.2,uc008kuw.2,uc008kux.2,uc008kuy.2,uc008kuz.2,uc008kvb.2,uc012bzd.1,uc012bze.1,uc012bzf.1,uc012bzg.1_5end|description=CAGE_peak_3_at_Madd_5end|id=chr2:91024134..91024180,-|ontology_enrichment_celltype=CL:0000988!4.17e-09!32;CL:0002032!4.17e-09!32;CL:0000037!4.17e-09!32;CL:0000566!4.17e-09!32;CL:0000837!4.17e-09!32;CL:0002031!3.56e-08!25|ontology_enrichment_celltype_v019_2=CL:0000988,7.00e-12,32;CL:0002032,7.00e-12,32;CL:0000037,7.00e-12,32;CL:0000837,7.00e-12,32;CL:0002031,5.33e-11,25;CL:0002320,3.57e-09,46;CL:0000134,3.57e-09,46;CL:0000049,7.60e-08,19;CL:0000763,6.73e-07,16;CL:0000738,7.19e-07,17;CL:0002087,7.19e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.47e-14!48;UBERON:0002405!1.03e-13!70;UBERON:0002390!1.58e-13!45;UBERON:0003061!1.58e-13!45;UBERON:0004119!7.97e-09!130;UBERON:0000925!7.97e-09!130;UBERON:0006595!7.97e-09!130;UBERON:0001007!1.16e-08!128;UBERON:0001555!1.16e-08!128;UBERON:0007026!1.16e-08!128;UBERON:0005911!1.80e-08!69;UBERON:0004921!2.24e-08!126;UBERON:0004185!2.24e-08!126;UBERON:0000077!4.71e-08!97;UBERON:0004177!5.35e-08!29;UBERON:0001004!8.29e-08!42;UBERON:0000065!1.09e-07!41;UBERON:0001041!1.15e-07!92;UBERON:0005057!1.27e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.64e-19,48;UBERON:0002405,4.64e-19,48;UBERON:0002390,1.18e-18,45;UBERON:0003061,1.18e-18,45;UBERON:0004177,3.04e-11,29;UBERON:0005057,3.04e-11,29;UBERON:0000077,3.73e-11,35;UBERON:0003081,8.18e-10,87;UBERON:0001004,2.63e-09,42;UBERON:0001041,3.01e-09,80;UBERON:0002384,3.57e-09,46;UBERON:0000065,3.79e-09,41;UBERON:0005911,4.93e-09,69;UBERON:0003408,2.32e-08,24;UBERON:0002371,2.98e-08,16;UBERON:0002370,3.09e-08,23;UBERON:0000974,3.09e-08,23;UBERON:0004807,3.09e-08,23;UBERON:0005058,3.09e-08,23;UBERON:0003351,3.09e-08,23;UBERON:0009113,3.09e-08,23;UBERON:0003295,3.09e-08,23;UBERON:0009722,3.09e-08,23;UBERON:0005562,3.09e-08,23;UBERON:0007690,3.09e-08,23;UBERON:0006562,1.30e-07,24;UBERON:0001557,1.30e-07,24;UBERON:0001042,1.30e-07,24;UBERON:0008814,1.30e-07,24;UBERON:0009145,1.30e-07,24;UBERON:0001474,1.34e-07,22;UBERON:0004765,1.34e-07,22;UBERON:0001434,1.34e-07,22;UBERON:0001007,2.49e-07,116;UBERON:0001555,2.49e-07,116;UBERON:0007026,2.49e-07,116;UBERON:0004921,2.68e-07,114;UBERON:0004119,2.89e-07,118;UBERON:0000925,2.89e-07,118;UBERON:0006595,2.89e-07,118;UBERON:0000926,8.38e-07,120;UBERON:0004120,8.38e-07,120;UBERON:0006603,8.38e-07,120|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,2.68606835059024,1.16806320297763,9.55512593467664,1.97104211012333,3.5109678948299,0.34243593645101,0.239316476986009,19.3456824822262,16.6098764596095,1.66554880907831,3.03712901084739,2.09868563438444,11.987562283613,14.3970155286026,13.1560792057389,2.21112554392781,11.8156231929054,8.8807928307238,2.07990149631429,0.91763712426868,0,0.86152399231815,0.861884930743556,0.570070258369122,0.756090389279792,0.886922042621219,3.17515336729816,6.1506478758457,0,1.1554064790051,0.166234645358492,0.816677425049476,13.393012183581,4.6880120671428,12.5645698553712,12.3528612486513,12.9778642142105,12.1377588257788,0,0,0,0,0,0.219686182734472,0,0,0,5.36904339384756,8.70434570413613,8.06625117941913,0,0,0,0,0,0.633831403506179,0,0,5.39939830368839,7.9109309005358,2.8419204597844,1.79760066311043,1.53687322128622,0,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0.227178579999552,0.453429360640713,4.34796733052517,1.72084775396277,0,0,0.649776417447669,0,1.68533304158102,0.340860645156116,0,0.70667914902068,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,0,1.94112595522402,13.4647699496529,1.92974780784272,0.173485326766136,0.608930956624282,0,0.753613202763113,0.587943535678524,0.376999773989026,1.73036477414062,2.74738778147832,6.19227386364912,0.647067399789637,3.97514733228708,3.87900202508178,3.72783522436244,0,0.209446706813455,4.59822699375465,2.51611761462433,1.79970819298022,2.28726408731516,0.599162557619291,0.457500602818626,0,0,1.02286182932132,0.62336413367868,0.973447578406546,0.203678727700633,3.4833951770826,0.252722758433675,5.26104639716185,0.260240885925407,0,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,1.55222022443409,0.431135985865684,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,1.40442637462647,3.08817488537658,1.13665399758237,0.414251545071004,0,0.540186184383045,0.946978942340841,0.196764231747404,0.771335564436891,0.465067889500816,0,0.233530684734339,0.329119699826961,1.47750717671186,1.4592385718254,1.60819986167866,2.19550115291051,1.20785776884335,0.841159794256509,0.102904612379284,2.31293148088659,0.264450566663544,0.639864751605702,0,0.77320476793256,0.403367049246685,0.667134131534611,0.760902504450237,0.949058123089023,0.494096864172033,1.25667604400135,1.98956472041151,1.36474860983384,0.898819408654221,0.432276099749388,1.39398891278057,0.189667900953082,0.342745537829186,3.38123207019241,0.203651327845314,0,0.210407459670956,0.379419222745544,0.885660887877613,0.941992367048249,0.987177311374404,0.296452627087149,1.50160595144485,1.57247196090562,2.69834534861824,2.43432145666204,2.41177159752417,2.29163266603278,2.87696137450811,3.56697498905078,0.823684239564244,2.87536413054709,1.86070473834252,0.624075346229121,0.757736633841335,0.358794827043824,0.964887042726734,16.2582807346612,0.757965647081939,0.814824882210129,0.339490171550376,0.938760993154008,2.01007508930179,3.09456733151818,5.85400943573396,6.9359463406724,3.98636441367795,4.62418829106713,8.84861899464985,9.67035898449015,12.5844680965915,7.53956419696361,7.61467957346193,1.96705709207614,0.551873492609465,0.80275294993896,0.703270119553219,0.163934945376675,1.00988370881749,0,0,0,0.477937595905104,0.668396022247182,0.566153061577665,0,1.16902343164525,0,0.963963949265421,0.851640511249612,0,0.488660878060728,1.81467135269789,1.32745138339963,0.485561272309963,0,0.754420319023592,0.590603785761546,0.922305443831782,1.03371317267288,0.727067458955011,0.356497378384721,1.8962205476149,0,0,5.10659408630682,0.18006109403131,0.388076051348264,0,1.24138163549592,0.535106452806212,0.822745103010605,1.2178597964584,1.17335854031855,0.847328283455281,0.441056796109924,1.15420377059036,1.77610869365496,0.663442174209714,0.716234064018819,0.164140899745061,1.1659233465194,0.556275906031529,7.00570611271196,2.27025554759545,4.07427960213366,3.20226376907975,4.92099219795691,7.32090154260872,7.9889862097112,8.6769900440668,6.49539876880792,0.954670618015114,0.316335993581135,0.813277868507395,0.540026704109006,0.418176592028937,0.87345025498471,0.944050424693745,1.1571483801547,1.04702376793612,0.518459893167171,1.24267862617385,0,0,0.330916980914195,0.583353565032143,0.129159823477731,0.506868376472335,0.352071715937262,0.2604087696879,0.419437377702843,0,0,18.0126338758062,0.810900861160657,2.2596410576262,4.67714962720062,8.23522800070415,10.3314304486258,11.658958603437,11.9628517011408,16.1546319917036,14.403086457795,17.3421038435366,16.7627554872374,17.8954025451013,26.8816875017609,0.680191150845634,0,0,0,3.09103350451505,2.25218970541418,2.74727436400898,1.50057865355346,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.900642406448441,0.453142408984205,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0.972426868273176,0.838452650511929,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,1.26348605881899,0.760437899670719,0.943131706930381,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.695305955669133,1.15745532278223,0.824171801606613,0.735994600671987,0.685738504770831,0.887379030796687,0.476872379894642,1.0174249164263,0.376437521661322,0.761531471025089,0.73171189149109,0.263069711437843,0.814824683075171,0.561142271657738,0.711810108745045,0.985044823755635,1.22769312950907,0.464810523557898,0.964533054905707,0.249810577937946,0.701794825336225,1.71896843238639,1.14772999241306,1.10295709559758,1.39120701372253|short_description=p3@Madd}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:228355 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AGQ4,uniprot:Q80U28,uniprot:A2AGQ5,uniprot:A2AGQ7,uniprot:A2AGQ9,uniprot:A2AGQ2,uniprot:Q99LH6 | |||
|association_with_transcript=-109bp_to_NM_001177721,NM_001177722,NM_001177723,NM_001177724,NM_001177725,NM_001177726,NM_001177727,NM_001177728,NM_001177729,uc008kuv.2,uc008kuw.2,uc008kux.2,uc008kuy.2,uc008kuz.2,uc008kvb.2,uc012bzd.1,uc012bze.1,uc012bzf.1,uc012bzg.1_5end | |||
|cluster_id=chr2:91024134..91024180,- | |||
|description=CAGE_peak_3_at_Madd_5end | |||
|id=chr2:91024134..91024180,- | |||
|ontology_enrichment_celltype=CL:0000988!4.17e-09!32;CL:0002032!4.17e-09!32;CL:0000037!4.17e-09!32;CL:0000566!4.17e-09!32;CL:0000837!4.17e-09!32;CL:0002031!3.56e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.00e-12,32;CL:0002032,7.00e-12,32;CL:0000037,7.00e-12,32;CL:0000837,7.00e-12,32;CL:0002031,5.33e-11,25;CL:0002320,3.57e-09,46;CL:0000134,3.57e-09,46;CL:0000049,7.60e-08,19;CL:0000763,6.73e-07,16;CL:0000738,7.19e-07,17;CL:0002087,7.19e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.47e-14!48;UBERON:0002405!1.03e-13!70;UBERON:0002390!1.58e-13!45;UBERON:0003061!1.58e-13!45;UBERON:0004119!7.97e-09!130;UBERON:0000925!7.97e-09!130;UBERON:0006595!7.97e-09!130;UBERON:0001007!1.16e-08!128;UBERON:0001555!1.16e-08!128;UBERON:0007026!1.16e-08!128;UBERON:0005911!1.80e-08!69;UBERON:0004921!2.24e-08!126;UBERON:0004185!2.24e-08!126;UBERON:0000077!4.71e-08!97;UBERON:0004177!5.35e-08!29;UBERON:0001004!8.29e-08!42;UBERON:0000065!1.09e-07!41;UBERON:0001041!1.15e-07!92;UBERON:0005057!1.27e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.64e-19,48;UBERON:0002405,4.64e-19,48;UBERON:0002390,1.18e-18,45;UBERON:0003061,1.18e-18,45;UBERON:0004177,3.04e-11,29;UBERON:0005057,3.04e-11,29;UBERON:0000077,3.73e-11,35;UBERON:0003081,8.18e-10,87;UBERON:0001004,2.63e-09,42;UBERON:0001041,3.01e-09,80;UBERON:0002384,3.57e-09,46;UBERON:0000065,3.79e-09,41;UBERON:0005911,4.93e-09,69;UBERON:0003408,2.32e-08,24;UBERON:0002371,2.98e-08,16;UBERON:0002370,3.09e-08,23;UBERON:0000974,3.09e-08,23;UBERON:0004807,3.09e-08,23;UBERON:0005058,3.09e-08,23;UBERON:0003351,3.09e-08,23;UBERON:0009113,3.09e-08,23;UBERON:0003295,3.09e-08,23;UBERON:0009722,3.09e-08,23;UBERON:0005562,3.09e-08,23;UBERON:0007690,3.09e-08,23;UBERON:0006562,1.30e-07,24;UBERON:0001557,1.30e-07,24;UBERON:0001042,1.30e-07,24;UBERON:0008814,1.30e-07,24;UBERON:0009145,1.30e-07,24;UBERON:0001474,1.34e-07,22;UBERON:0004765,1.34e-07,22;UBERON:0001434,1.34e-07,22;UBERON:0001007,2.49e-07,116;UBERON:0001555,2.49e-07,116;UBERON:0007026,2.49e-07,116;UBERON:0004921,2.68e-07,114;UBERON:0004119,2.89e-07,118;UBERON:0000925,2.89e-07,118;UBERON:0006595,2.89e-07,118;UBERON:0000926,8.38e-07,120;UBERON:0004120,8.38e-07,120;UBERON:0006603,8.38e-07,120 | |||
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| |||
|short_description=p3@Madd | |||
}} |
Revision as of 15:22, 5 August 2015
Short description: | p3@Madd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Madd_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -109bp_to_NM_001177721, NM_001177722, NM_001177723, NM_001177724, NM_001177725, NM_001177726, NM_001177727, NM_001177728, NM_001177729, uc008kuv.2, uc008kuw.2, uc008kux.2, uc008kuy.2, uc008kuz.2, uc008kvb.2, uc012bzd.1, uc012bze.1, uc012bzf.1, uc012bzg.1_5end |
EntrezGene: | 228355 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.00e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.00e-12 | 32 |
hematopoietic stem cell | 7.00e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.00e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 5.33e-11 | 25 |
connective tissue cell | 3.57e-09 | 46 |
mesenchymal cell | 3.57e-09 | 46 |
common myeloid progenitor | 7.60e-08 | 19 |
myeloid cell | 6.73e-07 | 16 |
leukocyte | 7.19e-07 | 17 |
nongranular leukocyte | 7.19e-07 | 17 |