FFCP PHASE1:Mm9::chr9:71844111..71844114,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=228 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:71844111..71844114,- | |||
|description=CAGE_peak_at_chr9:71844111..71844114,- | |description=CAGE_peak_at_chr9:71844111..71844114,- | ||
|id=chr9:71844111..71844114,- | |id=chr9:71844111..71844114,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.26e-08!42;UBERON:0001048!1.98e-08!147;UBERON:0000065!3.27e-08!41;UBERON:0004177!8.87e-08!29;UBERON:0003408!1.11e-07!24;UBERON:0002370!3.06e-07!23;UBERON:0000974!3.06e-07!23;UBERON:0004807!3.06e-07!23;UBERON:0005058!3.06e-07!23;UBERON:0003351!3.06e-07!23;UBERON:0009113!3.06e-07!23;UBERON:0003295!3.06e-07!23;UBERON:0009722!3.06e-07!23;UBERON:0005562!3.06e-07!23;UBERON:0007690!3.06e-07!23;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.69e-09,43;UBERON:0001048,7.62e-09,134;UBERON:0001004,1.24e-08,42;UBERON:0007811,2.88e-08,36;UBERON:0000065,3.22e-08,41;UBERON:0004177,8.76e-08,29;UBERON:0005057,8.76e-08,29;UBERON:0000077,9.53e-08,35;UBERON:0003408,1.10e-07,24;UBERON:0002370,3.03e-07,23;UBERON:0000974,3.03e-07,23;UBERON:0004807,3.03e-07,23;UBERON:0005058,3.03e-07,23;UBERON:0003351,3.03e-07,23;UBERON:0009113,3.03e-07,23;UBERON:0003295,3.03e-07,23;UBERON:0009722,3.03e-07,23;UBERON:0005562,3.03e-07,23;UBERON:0007690,3.03e-07,23;UBERON:0001041,4.66e-07,80;UBERON:0006562,6.18e-07,24;UBERON:0001557,6.18e-07,24;UBERON:0001042,6.18e-07,24;UBERON:0008814,6.18e-07,24;UBERON:0009145,6.18e-07,24 | |||
|phase1_expression=2.40223270657191,0.697950815278722,0,1.81478526784098,2.00358291978539,1.51091344720701,2.10251376535973,10.975482492534,5.490760163915,9.83071010552373,3.4243593645101,7.0199499915896,8.9024379564227,11.4520727168887,3.66420737997229,4.25198061518635,4.19737126876888,7.5710919685977,8.22686601634433,5.94145512517242,6.88850650223665,3.27660138962921,5.74639536105658,1.27993938234725,2.2940928106717,0,0.430761996159075,1.07735616342945,2.28028103347649,1.00812051903972,3.10422714917427,1.27006134691926,0,0,0.866554859253824,3.15845826181135,2.45003227514843,1.25559489221072,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,1.45653105909346,6.42073771675444,4.1564541800001,5.32285581268876,0,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,0,8.55691290894455,11.6057942721815,7.73015738027667,3.08711323243136,3.43840127926508,0.515672092277442,0.606949382578793,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0,2.28117147078651,1.75507719831198,1.26194976810829,0.856952953211411,0.441737081903227,0.857435594504678,1.24599112323707,2.75765635983006,3.30347642998166,1.40456071893706,1.38245879930619,0.527545150920775,0.640413505216868,1.56274011167028,0,4.50210088025344,2.13917546887534,2.94628585473668,3.55929201997757,2.98239113320481,1.81742863999642,3.47629176491213,8.40607017234866,1.72084775396277,0.679971333707751,2.15881276655127,2.59910566979068,1.79210754838934,3.65155492342555,1.1930122580464,1.29893002301434,1.06001872353102,1.54927761754349,3.84979432242953,5.09610479413291,7.11066703153331,3.030874574157,2.53359865475099,1.51657333504435,6.39429726426736,6.73238497482646,6.38301197978747,3.99016251562112,4.56698217468212,4.15107895060905,4.82312449768392,9.64227398512779,1.38233250462643,5.19109432242185,6.07317299063629,3.5384422077995,6.79420769779119,9.27534377533653,5.81850303762267,9.31958806090611,10.5401086924157,4.60782754989601,6.38642638021478,2.87556298814209,0.599902730993408,3.43089613097275,3.44518470631092,2.74500361691176,1.38219787324151,2.25971616249959,2.04572365864264,3.1168206683934,2.92034273521964,5.6011650117674,8.08645308965605,10.3616330957807,7.78634866779954,8.97831056442656,5.74755261083682,4.86167750474443,13.1113191517072,12.1785333480877,16.2704424761759,11.1505052226077,14.4873887613849,7.11374376678379,10.4008344092301,6.15828934573821,3.06874025398605,16.6828349535359,11.8405736617537,10.0833246839892,8.95654200683219,5.61770549850588,1.02939162845886,3.12579849335152,7.45652781127807,8.91199027928165,7.38254451990161,7.57583153872673,7.67380503814875,8.4846912088058,9.99895962426754,4.02410102099429,7.35621656913168,6.08871444679878,11.1633875573785,8.26901857367728,5.70179950958796,6.58650345873152,4.69722465661301,3.99550902271842,2.16099685996497,6.60837565967596,5.02456076660734,6.61193576659225,10.2184135618593,7.34544529535932,5.84882221407693,7.33847544688072,3.42406127002606,7.59246498471219,5.10566759644434,8.79673230800943,6.96347652144028,5.65395852645448,8.98819408654222,5.40345124686736,7.36822711041159,0.379335801906163,11.7675967988021,10.1436962105772,10.1825663922657,12.0250542043928,7.43439690837377,7.20896523216533,6.19962621514329,8.16393384775149,2.22114895059241,4.15033677922008,3.00321190288969,5.70021085828289,4.27238013531222,4.05720242777006,5.788251834058,6.3656462945355,5.17853047411459,10.5387897403773,7.68771956926628,27.3159592401974,10.0478055870496,8.7370548472077,4.79899868099512,3.22915344339442,3.85954817090694,6.28160846566456,3.22135400009824,10.5927234687317,9.33597971763535,13.1426539041561,9.38035041674168,9.28370199455454,7.80534591431195,10.5615546551148,13.2878813789265,4.9430978283821,12.6174752331118,12.4333186943445,10.2700831592873,3.01582567878545,5.98296252200581,9.34352118736169,6.34654516500885,4.33486592967038,2.22702204525186,0.491804836130026,5.04941854408746,10.0962630213202,10.5418460960092,11.6328634775711,8.84184552424442,10.4715376818725,11.889214293131,9.71545684019746,10.8134667427185,6.32460444714438,11.2462460747632,6.81312408999689,2.49291845134157,6.67836533349662,12.0428189769951,1.32745138339963,5.58395463156457,3.62788268357701,5.65815239267694,1.47650946440386,4.91896236710284,7.49442050187841,7.99774204850512,8.55593708123331,9.7971394960103,7.37930260024991,3.09406629744561,17.702859499197,4.86164953884538,0.905510786479282,5.35842587578981,6.38424841112185,4.8159580752559,8.06290200950393,0.304464949114599,7.50949465803873,5.71946591332314,4.6310963591542,9.72828892354732,16.4693715229824,6.63442174209714,8.47543642422269,11.3257220824092,9.03590593552537,4.45020724825223,6.66396435111626,4.12773735926445,7.40778109478847,16.5764242164128,14.6262823661497,7.32090154260872,2.54967644990783,1.81936888020755,3.73139929271944,1.90934123603023,4.74503990371703,8.3360981522008,6.69633113095168,8.99079672862215,6.98760203987768,10.7891477107857,9.00922667406162,7.59092231753686,8.68420321055012,11.1841076355647,1.12738587736838,9.27002585472668,5.46013018508422,4.27792614356905,6.07051170345336,9.63049915297436,10.0927225235348,7.42164993610516,6.92071673209692,4.1069300540421,6.62469014393091,42.9775124054322,3.85177909051312,9.75754093065859,20.917252499425,20.4090433060929,25.4312134120019,34.3758985627111,39.4331037556121,35.9440561815406,42.9806389534199,49.5056569021887,41.1272256721755,38.8695840226931,60.191604623508,5.21479882314986,1.55390167361845,1.25599399253266,1.34307693091263,7.53439416725543,6.19352168988901,8.42497471629419,8.7891035422417,7.02200945649509,6.21227026878773,3.68260189205742,4.58316410751517,6.70227411140382,3.42541259885321,3.7769694869485,3.37511250115903,5.40385443869065,2.26571204492102,4.65984280576638,1.55681021376265,6.3843979744165,9.39034831647738,10.6966955510049,3.35381060204772,0.183843508450014,10.4455962066759,5.76898160268904,10.5903339165299,9.09709962349671,11.1530891951705,8.11093267960128,8.24045265734965,6.91471645972588,5.74354689556133,6.66811167796303,6.48952225291191,8.10218725947561,7.41754621445952,8.24313952752625,12.6861623382604,8.87379030796687,8.58370283810355,11.7730597472186,7.0582035311498,9.05376304440939,10.9756783723664,14.4688341290814,8.55565917228929,10.1005608898393,6.8808310512021,6.99381824866501,5.32000356120596,9.14127362997199,10.6098636039628,3.99696924700713,8.4215379040347,7.30561583764214,7.46024495068489,5.95596831622692,4.40548887678801 | |phase1_expression=2.40223270657191,0.697950815278722,0,1.81478526784098,2.00358291978539,1.51091344720701,2.10251376535973,10.975482492534,5.490760163915,9.83071010552373,3.4243593645101,7.0199499915896,8.9024379564227,11.4520727168887,3.66420737997229,4.25198061518635,4.19737126876888,7.5710919685977,8.22686601634433,5.94145512517242,6.88850650223665,3.27660138962921,5.74639536105658,1.27993938234725,2.2940928106717,0,0.430761996159075,1.07735616342945,2.28028103347649,1.00812051903972,3.10422714917427,1.27006134691926,0,0,0.866554859253824,3.15845826181135,2.45003227514843,1.25559489221072,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,1.45653105909346,6.42073771675444,4.1564541800001,5.32285581268876,0,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,0,8.55691290894455,11.6057942721815,7.73015738027667,3.08711323243136,3.43840127926508,0.515672092277442,0.606949382578793,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0,2.28117147078651,1.75507719831198,1.26194976810829,0.856952953211411,0.441737081903227,0.857435594504678,1.24599112323707,2.75765635983006,3.30347642998166,1.40456071893706,1.38245879930619,0.527545150920775,0.640413505216868,1.56274011167028,0,4.50210088025344,2.13917546887534,2.94628585473668,3.55929201997757,2.98239113320481,1.81742863999642,3.47629176491213,8.40607017234866,1.72084775396277,0.679971333707751,2.15881276655127,2.59910566979068,1.79210754838934,3.65155492342555,1.1930122580464,1.29893002301434,1.06001872353102,1.54927761754349,3.84979432242953,5.09610479413291,7.11066703153331,3.030874574157,2.53359865475099,1.51657333504435,6.39429726426736,6.73238497482646,6.38301197978747,3.99016251562112,4.56698217468212,4.15107895060905,4.82312449768392,9.64227398512779,1.38233250462643,5.19109432242185,6.07317299063629,3.5384422077995,6.79420769779119,9.27534377533653,5.81850303762267,9.31958806090611,10.5401086924157,4.60782754989601,6.38642638021478,2.87556298814209,0.599902730993408,3.43089613097275,3.44518470631092,2.74500361691176,1.38219787324151,2.25971616249959,2.04572365864264,3.1168206683934,2.92034273521964,5.6011650117674,8.08645308965605,10.3616330957807,7.78634866779954,8.97831056442656,5.74755261083682,4.86167750474443,13.1113191517072,12.1785333480877,16.2704424761759,11.1505052226077,14.4873887613849,7.11374376678379,10.4008344092301,6.15828934573821,3.06874025398605,16.6828349535359,11.8405736617537,10.0833246839892,8.95654200683219,5.61770549850588,1.02939162845886,3.12579849335152,7.45652781127807,8.91199027928165,7.38254451990161,7.57583153872673,7.67380503814875,8.4846912088058,9.99895962426754,4.02410102099429,7.35621656913168,6.08871444679878,11.1633875573785,8.26901857367728,5.70179950958796,6.58650345873152,4.69722465661301,3.99550902271842,2.16099685996497,6.60837565967596,5.02456076660734,6.61193576659225,10.2184135618593,7.34544529535932,5.84882221407693,7.33847544688072,3.42406127002606,7.59246498471219,5.10566759644434,8.79673230800943,6.96347652144028,5.65395852645448,8.98819408654222,5.40345124686736,7.36822711041159,0.379335801906163,11.7675967988021,10.1436962105772,10.1825663922657,12.0250542043928,7.43439690837377,7.20896523216533,6.19962621514329,8.16393384775149,2.22114895059241,4.15033677922008,3.00321190288969,5.70021085828289,4.27238013531222,4.05720242777006,5.788251834058,6.3656462945355,5.17853047411459,10.5387897403773,7.68771956926628,27.3159592401974,10.0478055870496,8.7370548472077,4.79899868099512,3.22915344339442,3.85954817090694,6.28160846566456,3.22135400009824,10.5927234687317,9.33597971763535,13.1426539041561,9.38035041674168,9.28370199455454,7.80534591431195,10.5615546551148,13.2878813789265,4.9430978283821,12.6174752331118,12.4333186943445,10.2700831592873,3.01582567878545,5.98296252200581,9.34352118736169,6.34654516500885,4.33486592967038,2.22702204525186,0.491804836130026,5.04941854408746,10.0962630213202,10.5418460960092,11.6328634775711,8.84184552424442,10.4715376818725,11.889214293131,9.71545684019746,10.8134667427185,6.32460444714438,11.2462460747632,6.81312408999689,2.49291845134157,6.67836533349662,12.0428189769951,1.32745138339963,5.58395463156457,3.62788268357701,5.65815239267694,1.47650946440386,4.91896236710284,7.49442050187841,7.99774204850512,8.55593708123331,9.7971394960103,7.37930260024991,3.09406629744561,17.702859499197,4.86164953884538,0.905510786479282,5.35842587578981,6.38424841112185,4.8159580752559,8.06290200950393,0.304464949114599,7.50949465803873,5.71946591332314,4.6310963591542,9.72828892354732,16.4693715229824,6.63442174209714,8.47543642422269,11.3257220824092,9.03590593552537,4.45020724825223,6.66396435111626,4.12773735926445,7.40778109478847,16.5764242164128,14.6262823661497,7.32090154260872,2.54967644990783,1.81936888020755,3.73139929271944,1.90934123603023,4.74503990371703,8.3360981522008,6.69633113095168,8.99079672862215,6.98760203987768,10.7891477107857,9.00922667406162,7.59092231753686,8.68420321055012,11.1841076355647,1.12738587736838,9.27002585472668,5.46013018508422,4.27792614356905,6.07051170345336,9.63049915297436,10.0927225235348,7.42164993610516,6.92071673209692,4.1069300540421,6.62469014393091,42.9775124054322,3.85177909051312,9.75754093065859,20.917252499425,20.4090433060929,25.4312134120019,34.3758985627111,39.4331037556121,35.9440561815406,42.9806389534199,49.5056569021887,41.1272256721755,38.8695840226931,60.191604623508,5.21479882314986,1.55390167361845,1.25599399253266,1.34307693091263,7.53439416725543,6.19352168988901,8.42497471629419,8.7891035422417,7.02200945649509,6.21227026878773,3.68260189205742,4.58316410751517,6.70227411140382,3.42541259885321,3.7769694869485,3.37511250115903,5.40385443869065,2.26571204492102,4.65984280576638,1.55681021376265,6.3843979744165,9.39034831647738,10.6966955510049,3.35381060204772,0.183843508450014,10.4455962066759,5.76898160268904,10.5903339165299,9.09709962349671,11.1530891951705,8.11093267960128,8.24045265734965,6.91471645972588,5.74354689556133,6.66811167796303,6.48952225291191,8.10218725947561,7.41754621445952,8.24313952752625,12.6861623382604,8.87379030796687,8.58370283810355,11.7730597472186,7.0582035311498,9.05376304440939,10.9756783723664,14.4688341290814,8.55565917228929,10.1005608898393,6.8808310512021,6.99381824866501,5.32000356120596,9.14127362997199,10.6098636039628,3.99696924700713,8.4215379040347,7.30561583764214,7.46024495068489,5.95596831622692,4.40548887678801 | ||
|short_description=p@chr9:71844111..71844114,- | |short_description=p@chr9:71844111..71844114,- | ||
}} | }} |
Latest revision as of 14:11, 5 August 2015
Short description: | p@chr9:71844111..71844114, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:71844111..71844114, - |
Coexpression cluster: | MCL_coexpression_mm9:228 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.69e-09 | 43 |
primordium | 7.62e-09 | 134 |
respiratory system | 1.24e-08 | 42 |
craniocervical region | 2.88e-08 | 36 |
respiratory tract | 3.22e-08 | 41 |
hemopoietic organ | 8.76e-08 | 29 |
immune organ | 8.76e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 9.53e-08 | 35 |
gland of gut | 1.10e-07 | 24 |
thymus | 3.03e-07 | 23 |
neck | 3.03e-07 | 23 |
respiratory system epithelium | 3.03e-07 | 23 |
hemolymphoid system gland | 3.03e-07 | 23 |
pharyngeal epithelium | 3.03e-07 | 23 |
thymic region | 3.03e-07 | 23 |
pharyngeal gland | 3.03e-07 | 23 |
entire pharyngeal arch endoderm | 3.03e-07 | 23 |
thymus primordium | 3.03e-07 | 23 |
early pharyngeal endoderm | 3.03e-07 | 23 |
foregut | 4.66e-07 | 80 |
pharynx | 6.18e-07 | 24 |
upper respiratory tract | 6.18e-07 | 24 |
chordate pharynx | 6.18e-07 | 24 |
pharyngeal arch system | 6.18e-07 | 24 |
pharyngeal region of foregut | 6.18e-07 | 24 |