FFCP PHASE1:Mm9::chr15:75396740..75396784,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:75396740..75396784,- to FFCP PHASE1:Mm9::chr15:75396740..75396784,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=870 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:75396740..75396784,- | |||
|description=CAGE_peak_at_chr15:75396740..75396784,- | |||
|id=chr15:75396740..75396784,- | |||
|ontology_enrichment_celltype=CL:0000117!5.43e-20!23;CL:0000337!5.43e-20!23;CL:0000540!1.96e-14!33;CL:0000047!1.96e-14!33;CL:0000031!1.96e-14!33;CL:0000404!1.96e-14!33;CL:0000221!1.96e-11!44;CL:0000133!1.96e-11!44;CL:0002319!3.15e-11!43;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0000055!2.78e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.71e-29,23;CL:0000337,3.71e-29,23;CL:0000540,8.78e-19,33;CL:0000047,8.78e-19,33;CL:0000031,8.78e-19,33;CL:0000404,8.78e-19,33;CL:0000393,3.97e-15,39;CL:0000211,3.97e-15,39;CL:0002319,2.90e-13,43;CL:0000221,7.50e-13,44;CL:0000133,7.50e-13,44;CL:0002614,1.42e-07,3;CL:0002612,2.54e-07,3;CL:0002610,3.54e-07,3;CL:0000120,8.97e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.08e-33!75;UBERON:0001016!1.08e-33!75;UBERON:0001017!4.60e-33!73;UBERON:0005743!4.60e-33!73;UBERON:0001049!8.34e-33!52;UBERON:0005068!8.34e-33!52;UBERON:0006241!8.34e-33!52;UBERON:0007135!8.34e-33!52;UBERON:0000955!9.03e-31!50;UBERON:0006238!9.03e-31!50;UBERON:0002616!5.65e-30!49;UBERON:0003080!4.03e-28!40;UBERON:0002346!1.84e-27!71;UBERON:0003075!1.84e-27!71;UBERON:0007284!1.84e-27!71;UBERON:0002780!2.64e-27!39;UBERON:0001890!2.64e-27!39;UBERON:0006240!2.64e-27!39;UBERON:0000033!6.02e-27!63;UBERON:0003056!7.03e-25!49;UBERON:0004121!1.37e-24!102;UBERON:0000924!1.37e-24!102;UBERON:0006601!1.37e-24!102;UBERON:0002020!5.96e-24!34;UBERON:0002791!5.18e-19!29;UBERON:0003528!5.18e-19!29;UBERON:0001893!5.18e-19!29;UBERON:0007811!1.92e-15!86;UBERON:0000153!3.26e-13!94;UBERON:0000956!2.81e-12!21;UBERON:0001869!2.81e-12!21;UBERON:0000203!2.81e-12!21;UBERON:0002619!4.96e-10!17;UBERON:0001894!4.15e-09!10;UBERON:0006222!4.15e-09!10;UBERON:0002021!1.27e-08!10;UBERON:0000411!1.27e-08!10;UBERON:0001950!1.27e-08!10;UBERON:0002420!3.87e-08!8;UBERON:0007245!3.87e-08!8;UBERON:0010009!3.87e-08!8;UBERON:0010011!3.87e-08!8;UBERON:0000454!3.87e-08!8;UBERON:0000007!1.62e-07!8;UBERON:0003296!1.62e-07!8;UBERON:0010133!1.62e-07!8;UBERON:0000025!9.47e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-53,54;UBERON:0001017,2.88e-46,73;UBERON:0001049,3.60e-46,52;UBERON:0005068,3.60e-46,52;UBERON:0006241,3.60e-46,52;UBERON:0007135,3.60e-46,52;UBERON:0001016,8.69e-45,75;UBERON:0000955,6.42e-39,47;UBERON:0006238,6.42e-39,47;UBERON:0003080,9.21e-39,40;UBERON:0002616,2.04e-37,46;UBERON:0002780,3.62e-37,39;UBERON:0001890,3.62e-37,39;UBERON:0006240,3.62e-37,39;UBERON:0002346,6.93e-36,64;UBERON:0003075,6.93e-36,64;UBERON:0007284,6.93e-36,64;UBERON:0002020,3.51e-34,34;UBERON:0004121,2.07e-33,95;UBERON:0000924,2.07e-33,95;UBERON:0006601,2.07e-33,95;UBERON:0010371,2.18e-30,73;UBERON:0003056,2.96e-30,49;UBERON:0003528,9.39e-25,29;UBERON:0002791,9.39e-25,29;UBERON:0001893,9.39e-25,29;UBERON:0010314,2.60e-22,92;UBERON:0000025,2.53e-16,114;UBERON:0002420,2.28e-15,8;UBERON:0007245,2.28e-15,8;UBERON:0010009,2.28e-15,8;UBERON:0010011,2.28e-15,8;UBERON:0000454,2.28e-15,8;UBERON:0004111,1.11e-14,122;UBERON:0002619,2.00e-13,17;UBERON:0001894,4.97e-13,10;UBERON:0006222,4.97e-13,10;UBERON:0000956,2.00e-12,21;UBERON:0001869,2.00e-12,21;UBERON:0000203,2.00e-12,21;UBERON:0011216,1.59e-11,194;UBERON:0001948,1.78e-11,5;UBERON:0002315,1.78e-11,5;UBERON:0002021,6.17e-11,10;UBERON:0000411,6.17e-11,10;UBERON:0001950,6.17e-11,10;UBERON:0000007,8.13e-10,8;UBERON:0003296,8.13e-10,8;UBERON:0010133,8.13e-10,8;UBERON:0002240,1.79e-09,6;UBERON:0005174,1.79e-09,6;UBERON:0001137,1.79e-09,6;UBERON:0000369,1.98e-09,5;UBERON:0002435,1.98e-09,5;UBERON:0000204,1.98e-09,5;UBERON:0010082,1.98e-09,5;UBERON:0002950,4.87e-09,4;UBERON:0001891,4.87e-09,4;UBERON:0009616,4.87e-09,4;UBERON:0010286,4.87e-09,4;UBERON:0003076,1.01e-07,12;UBERON:0003057,1.01e-07,12;UBERON:0000483,1.04e-07,174;UBERON:0002038,1.42e-07,3;UBERON:0009663,1.42e-07,3;UBERON:0009661,1.42e-07,3;UBERON:0000125,1.42e-07,3;UBERON:0002308,1.42e-07,3;UBERON:0000119,1.59e-07,176;UBERON:0002257,2.54e-07,3;UBERON:0004684,3.54e-07,3;UBERON:0002275,3.54e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23706337375356,2.64495489636016,3.80298842103708,0,0,0,0,0.7104801149461,0,0.768436610643109,0.311068836925433,0.540023753326763,0.841299845405528,8.85518051651791,10.6016899656774,1.10241719293459,0.766763768145891,1.83843757322004,6.60695285996332,3.44755812830007,3.99376986466233,2.76961204233407,3.11057988248193,2.08365348222704,4.4669279840221,10.1297269805702,7.94550888439413,6.18720029494702,5.55249555116501,4.28718725398191,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.9472783122627,1.37250180845588,2.38743269014442,3.12883776346098,2.04572365864264,2.49345653471472,2.92034273521964,0.203678727700633,0,0,0,0,0,0.180062129805349,0.452114453507145,0,0.384341160854549,0.281105173679186,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,4.41608891984667,1.74937841044784,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.52375192569864,0,0,0.631016438832513,0.780877488593277,0,0,0,0,0,0,0,1.60660658210904,0,1.06839362200353,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5536277783674,0.18006109403131,0.388076051348264,2.14337035031592,4.96552654198366,9.98865378571595,9.54384319492302,11.2652031172402,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.920650473014354,1.71868654031819,1.89038500578056,1.37016503954128,0.755393897389701,6.07520250208625,2.70192721934532,2.26571204492102,1.55328093525546,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.192075457214608,0.17230640686684,0,0.579421629724277,0.77163688185482,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0.872078499793971,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0,0.561142271657738,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.859484216193193,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23706337375356,2.64495489636016,3.80298842103708,0,0,0,0,0.7104801149461,0,0.768436610643109,0.311068836925433,0.540023753326763,0.841299845405528,8.85518051651791,10.6016899656774,1.10241719293459,0.766763768145891,1.83843757322004,6.60695285996332,3.44755812830007,3.99376986466233,2.76961204233407,3.11057988248193,2.08365348222704,4.4669279840221,10.1297269805702,7.94550888439413,6.18720029494702,5.55249555116501,4.28718725398191,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.9472783122627,1.37250180845588,2.38743269014442,3.12883776346098,2.04572365864264,2.49345653471472,2.92034273521964,0.203678727700633,0,0,0,0,0,0.180062129805349,0.452114453507145,0,0.384341160854549,0.281105173679186,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,4.41608891984667,1.74937841044784,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.52375192569864,0,0,0.631016438832513,0.780877488593277,0,0,0,0,0,0,0,1.60660658210904,0,1.06839362200353,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5536277783674,0.18006109403131,0.388076051348264,2.14337035031592,4.96552654198366,9.98865378571595,9.54384319492302,11.2652031172402,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.920650473014354,1.71868654031819,1.89038500578056,1.37016503954128,0.755393897389701,6.07520250208625,2.70192721934532,2.26571204492102,1.55328093525546,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.192075457214608,0.17230640686684,0,0.579421629724277,0.77163688185482,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0.872078499793971,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0,0.561142271657738,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.859484216193193,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr15:75396740..75396784,- | |||
}} | }} |
Latest revision as of 11:42, 5 August 2015
Short description: | p@chr15:75396740..75396784, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:75396740..75396784, - |
Coexpression cluster: | MCL_coexpression_mm9:870 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.71e-29 | 23 |
neuroblast (sensu Vertebrata) | 3.71e-29 | 23 |
neuron | 8.78e-19 | 33 |
neuronal stem cell | 8.78e-19 | 33 |
neuroblast | 8.78e-19 | 33 |
electrically signaling cell | 8.78e-19 | 33 |
electrically responsive cell | 3.97e-15 | 39 |
electrically active cell | 3.97e-15 | 39 |
neural cell | 2.90e-13 | 43 |
ectodermal cell | 7.50e-13 | 44 |
neurectodermal cell | 7.50e-13 | 44 |
neuron of the substantia nigra | 1.42e-07 | 3 |
neuron of the ventral spinal cord | 2.54e-07 | 3 |
raphe nuclei neuron | 3.54e-07 | 3 |
granule cell | 8.97e-07 | 3 |