FFCP PHASE1:Mm9::chr17:84580073..84580090,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:84580073..84580090,- | |||
|description=CAGE_peak_at_chr17:84580073..84580090,- | |description=CAGE_peak_at_chr17:84580073..84580090,- | ||
|id=chr17:84580073..84580090,- | |id=chr17:84580073..84580090,- | ||
|ontology_enrichment_celltype=CL:0000988!1.24e-15!32;CL:0002032!1.24e-15!32;CL:0000037!1.24e-15!32;CL:0000566!1.24e-15!32;CL:0000837!1.24e-15!32;CL:0002031!1.56e-12!25;CL:0000084!5.16e-12!11;CL:0000827!5.16e-12!11;CL:0000838!9.12e-11!12;CL:0002320!9.05e-10!46;CL:0000134!9.05e-10!46;CL:0000542!1.03e-09!13;CL:0000051!1.03e-09!13;CL:0000791!2.02e-09!9;CL:0000789!2.02e-09!9;CL:0002420!2.02e-09!9;CL:0002419!2.02e-09!9;CL:0000790!2.02e-09!9;CL:0000624!4.18e-08!8;CL:0000553!4.78e-08!6;CL:0000556!4.78e-08!6;CL:0000049!1.79e-07!19;CL:0000219!2.39e-07!54;CL:0000738!8.88e-07!17;CL:0002087!8.88e-07!17 | |ontology_enrichment_celltype=CL:0000988!1.24e-15!32;CL:0002032!1.24e-15!32;CL:0000037!1.24e-15!32;CL:0000566!1.24e-15!32;CL:0000837!1.24e-15!32;CL:0002031!1.56e-12!25;CL:0000084!5.16e-12!11;CL:0000827!5.16e-12!11;CL:0000838!9.12e-11!12;CL:0002320!9.05e-10!46;CL:0000134!9.05e-10!46;CL:0000542!1.03e-09!13;CL:0000051!1.03e-09!13;CL:0000791!2.02e-09!9;CL:0000789!2.02e-09!9;CL:0002420!2.02e-09!9;CL:0002419!2.02e-09!9;CL:0000790!2.02e-09!9;CL:0000624!4.18e-08!8;CL:0000553!4.78e-08!6;CL:0000556!4.78e-08!6;CL:0000049!1.79e-07!19;CL:0000219!2.39e-07!54;CL:0000738!8.88e-07!17;CL:0002087!8.88e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.32e-16,32;CL:0002032,8.32e-16,32;CL:0000037,8.32e-16,32;CL:0000837,8.32e-16,32;CL:0000084,1.70e-15,11;CL:0000827,1.70e-15,11;CL:0002031,4.97e-15,25;CL:0000838,4.00e-14,12;CL:0000542,5.81e-13,13;CL:0000051,5.81e-13,13;CL:0002320,3.25e-10,46;CL:0000134,3.25e-10,46;CL:0000791,4.77e-10,9;CL:0000789,4.77e-10,9;CL:0002420,4.77e-10,9;CL:0002419,4.77e-10,9;CL:0000790,4.77e-10,9;CL:0000738,1.11e-09,17;CL:0002087,1.11e-09,17;CL:0000553,5.93e-09,6;CL:0000556,5.93e-09,6;CL:0000219,2.52e-08,54;CL:0000624,1.74e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.55e-19!45;UBERON:0003061!1.55e-19!45;UBERON:0002193!3.31e-19!48;UBERON:0002370!6.89e-18!23;UBERON:0000974!6.89e-18!23;UBERON:0004807!6.89e-18!23;UBERON:0005058!6.89e-18!23;UBERON:0003351!6.89e-18!23;UBERON:0009113!6.89e-18!23;UBERON:0003295!6.89e-18!23;UBERON:0009722!6.89e-18!23;UBERON:0005562!6.89e-18!23;UBERON:0007690!6.89e-18!23;UBERON:0004177!1.22e-17!29;UBERON:0006562!7.03e-17!24;UBERON:0003408!7.03e-17!24;UBERON:0001557!7.03e-17!24;UBERON:0001042!7.03e-17!24;UBERON:0008814!7.03e-17!24;UBERON:0009145!7.03e-17!24;UBERON:0003081!1.79e-15!88;UBERON:0000072!2.60e-14!27;UBERON:0002405!8.35e-13!70;UBERON:0000065!3.22e-10!41;UBERON:0001004!8.04e-10!42;UBERON:0002384!9.05e-10!46;UBERON:0000063!1.10e-09!35;UBERON:0005057!1.16e-09!51 | |ontology_enrichment_uberon=UBERON:0002390!1.55e-19!45;UBERON:0003061!1.55e-19!45;UBERON:0002193!3.31e-19!48;UBERON:0002370!6.89e-18!23;UBERON:0000974!6.89e-18!23;UBERON:0004807!6.89e-18!23;UBERON:0005058!6.89e-18!23;UBERON:0003351!6.89e-18!23;UBERON:0009113!6.89e-18!23;UBERON:0003295!6.89e-18!23;UBERON:0009722!6.89e-18!23;UBERON:0005562!6.89e-18!23;UBERON:0007690!6.89e-18!23;UBERON:0004177!1.22e-17!29;UBERON:0006562!7.03e-17!24;UBERON:0003408!7.03e-17!24;UBERON:0001557!7.03e-17!24;UBERON:0001042!7.03e-17!24;UBERON:0008814!7.03e-17!24;UBERON:0009145!7.03e-17!24;UBERON:0003081!1.79e-15!88;UBERON:0000072!2.60e-14!27;UBERON:0002405!8.35e-13!70;UBERON:0000065!3.22e-10!41;UBERON:0001004!8.04e-10!42;UBERON:0002384!9.05e-10!46;UBERON:0000063!1.10e-09!35;UBERON:0005057!1.16e-09!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.63e-19,23;UBERON:0000974,4.63e-19,23;UBERON:0004807,4.63e-19,23;UBERON:0005058,4.63e-19,23;UBERON:0003351,4.63e-19,23;UBERON:0009113,4.63e-19,23;UBERON:0003295,4.63e-19,23;UBERON:0009722,4.63e-19,23;UBERON:0005562,4.63e-19,23;UBERON:0007690,4.63e-19,23;UBERON:0006562,3.59e-18,24;UBERON:0003408,3.59e-18,24;UBERON:0001557,3.59e-18,24;UBERON:0001042,3.59e-18,24;UBERON:0008814,3.59e-18,24;UBERON:0009145,3.59e-18,24;UBERON:0002390,4.92e-16,45;UBERON:0003061,4.92e-16,45;UBERON:0000072,6.75e-16,27;UBERON:0002193,7.83e-15,48;UBERON:0002405,7.83e-15,48;UBERON:0004177,1.21e-14,29;UBERON:0005057,1.21e-14,29;UBERON:0000077,9.72e-12,35;UBERON:0007811,2.38e-11,36;UBERON:0002384,3.25e-10,46;UBERON:0000065,1.10e-09,41;UBERON:0001004,2.11e-09,42;UBERON:0000153,3.94e-09,43;UBERON:0003081,7.80e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,0.985521055061667,2.80877431586392,0.171217968225505,0,7.70403284690426,5.42006494997784,0.333109761815663,1.41732687172878,0.699561878128147,2.36596624018678,2.60517423850904,1.27316895539409,0.0850432901510698,3.27660138962921,3.91799683708403,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0,0.837063261473815,0,0,0,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0.725362142011344,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,1.91704199209472,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0,0.228778173206523,1.69978429993855,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,3.79213344753814,1.01362607645082,0.616265742988964,0.389762468933385,0.716106782669926,1.58945083825012,1.32214994471966,1.47689527174577,2.22126189885925,0.990688486514998,0.806609481094724,1.26695244961678,2.79014340756955,4.55819918508119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.74457637980571,0.985521055061667,2.80877431586392,0.171217968225505,0,7.70403284690426,5.42006494997784,0.333109761815663,1.41732687172878,0.699561878128147,2.36596624018678,2.60517423850904,1.27316895539409,0.0850432901510698,3.27660138962921,3.91799683708403,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0,0.837063261473815,0,0,0,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0.725362142011344,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,1.91704199209472,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0,0.228778173206523,1.69978429993855,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,3.79213344753814,1.01362607645082,0.616265742988964,0.389762468933385,0.716106782669926,1.58945083825012,1.32214994471966,1.47689527174577,2.22126189885925,0.990688486514998,0.806609481094724,1.26695244961678,2.79014340756955,4.55819918508119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr17:84580073..84580090,- | |short_description=p@chr17:84580073..84580090,- | ||
}} | }} |
Latest revision as of 10:14, 5 August 2015
Short description: | p@chr17:84580073..84580090, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:84580073..84580090, - |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.32e-16 | 32 |
hematopoietic oligopotent progenitor cell | 8.32e-16 | 32 |
hematopoietic stem cell | 8.32e-16 | 32 |
hematopoietic multipotent progenitor cell | 8.32e-16 | 32 |
T cell | 1.70e-15 | 11 |
pro-T cell | 1.70e-15 | 11 |
hematopoietic lineage restricted progenitor cell | 4.97e-15 | 25 |
lymphoid lineage restricted progenitor cell | 4.00e-14 | 12 |
lymphocyte | 5.81e-13 | 13 |
common lymphoid progenitor | 5.81e-13 | 13 |
connective tissue cell | 3.25e-10 | 46 |
mesenchymal cell | 3.25e-10 | 46 |
mature alpha-beta T cell | 4.77e-10 | 9 |
alpha-beta T cell | 4.77e-10 | 9 |
immature T cell | 4.77e-10 | 9 |
mature T cell | 4.77e-10 | 9 |
immature alpha-beta T cell | 4.77e-10 | 9 |
leukocyte | 1.11e-09 | 17 |
nongranular leukocyte | 1.11e-09 | 17 |
megakaryocyte progenitor cell | 5.93e-09 | 6 |
megakaryocyte | 5.93e-09 | 6 |
motile cell | 2.52e-08 | 54 |
CD4-positive, alpha-beta T cell | 1.74e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.63e-19 | 23 |
neck | 4.63e-19 | 23 |
respiratory system epithelium | 4.63e-19 | 23 |
hemolymphoid system gland | 4.63e-19 | 23 |
pharyngeal epithelium | 4.63e-19 | 23 |
thymic region | 4.63e-19 | 23 |
pharyngeal gland | 4.63e-19 | 23 |
entire pharyngeal arch endoderm | 4.63e-19 | 23 |
thymus primordium | 4.63e-19 | 23 |
early pharyngeal endoderm | 4.63e-19 | 23 |
pharynx | 3.59e-18 | 24 |
gland of gut | 3.59e-18 | 24 |
upper respiratory tract | 3.59e-18 | 24 |
chordate pharynx | 3.59e-18 | 24 |
pharyngeal arch system | 3.59e-18 | 24 |
pharyngeal region of foregut | 3.59e-18 | 24 |
hematopoietic system | 4.92e-16 | 45 |
blood island | 4.92e-16 | 45 |
segment of respiratory tract | 6.75e-16 | 27 |
hemolymphoid system | 7.83e-15 | 48 |
immune system | 7.83e-15 | 48 |
hemopoietic organ | 1.21e-14 | 29 |
immune organ | 1.21e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 9.72e-12 | 35 |
craniocervical region | 2.38e-11 | 36 |
connective tissue | 3.25e-10 | 46 |
respiratory tract | 1.10e-09 | 41 |
respiratory system | 2.11e-09 | 42 |
anterior region of body | 3.94e-09 | 43 |
lateral plate mesoderm | 7.80e-08 | 87 |