FFCP PHASE1:Mm9::chr17:84174862..84174879,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=900 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:84174862..84174879,+ | |||
|description=CAGE_peak_at_chr17:84174862..84174879,+ | |description=CAGE_peak_at_chr17:84174862..84174879,+ | ||
|id=chr17:84174862..84174879,+ | |id=chr17:84174862..84174879,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.33e-07!32;CL:0002032!1.33e-07!32;CL:0000037!1.33e-07!32;CL:0000566!1.33e-07!32;CL:0000837!1.33e-07!32;CL:0000049!1.63e-07!19 | |ontology_enrichment_celltype=CL:0000988!1.33e-07!32;CL:0002032!1.33e-07!32;CL:0000037!1.33e-07!32;CL:0000566!1.33e-07!32;CL:0000837!1.33e-07!32;CL:0000049!1.63e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.31e-09,32;CL:0002032,1.31e-09,32;CL:0000037,1.31e-09,32;CL:0000837,1.31e-09,32;CL:0000049,1.81e-07,19;CL:0000553,2.73e-07,6;CL:0000556,2.73e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.60e-20!48;UBERON:0002390!8.90e-19!45;UBERON:0003061!8.90e-19!45;UBERON:0004177!2.05e-15!29;UBERON:0002405!4.24e-12!70;UBERON:0002370!2.69e-11!23;UBERON:0000974!2.69e-11!23;UBERON:0004807!2.69e-11!23;UBERON:0005058!2.69e-11!23;UBERON:0003351!2.69e-11!23;UBERON:0009113!2.69e-11!23;UBERON:0003295!2.69e-11!23;UBERON:0009722!2.69e-11!23;UBERON:0005562!2.69e-11!23;UBERON:0007690!2.69e-11!23;UBERON:0006562!1.18e-10!24;UBERON:0003408!1.18e-10!24;UBERON:0001557!1.18e-10!24;UBERON:0001042!1.18e-10!24;UBERON:0008814!1.18e-10!24;UBERON:0009145!1.18e-10!24;UBERON:0003081!2.21e-10!88;UBERON:0000072!5.03e-09!27;UBERON:0000065!5.07e-09!41;UBERON:0001004!1.11e-08!42;UBERON:0005057!2.97e-07!51;UBERON:0000063!5.32e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.68e-22,48;UBERON:0002405,4.68e-22,48;UBERON:0002390,1.58e-21,45;UBERON:0003061,1.58e-21,45;UBERON:0002370,2.18e-20,23;UBERON:0000974,2.18e-20,23;UBERON:0004807,2.18e-20,23;UBERON:0005058,2.18e-20,23;UBERON:0003351,2.18e-20,23;UBERON:0009113,2.18e-20,23;UBERON:0003295,2.18e-20,23;UBERON:0009722,2.18e-20,23;UBERON:0005562,2.18e-20,23;UBERON:0007690,2.18e-20,23;UBERON:0004177,3.18e-20,29;UBERON:0005057,3.18e-20,29;UBERON:0006562,2.10e-19,24;UBERON:0003408,2.10e-19,24;UBERON:0001557,2.10e-19,24;UBERON:0001042,2.10e-19,24;UBERON:0008814,2.10e-19,24;UBERON:0009145,2.10e-19,24;UBERON:0000072,6.80e-17,27;UBERON:0000077,3.98e-16,35;UBERON:0003081,3.98e-12,87;UBERON:0007811,7.03e-12,36;UBERON:0000065,4.73e-10,41;UBERON:0001004,9.71e-10,42;UBERON:0000153,1.93e-09,43;UBERON:0000926,2.40e-07,120;UBERON:0004120,2.40e-07,120;UBERON:0006603,2.40e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,0,4.73193248037357,5.48457734422955,6.79023442876848,0.0850432901510698,11.7163322417045,11.4927907221132,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,3.52343472721246,0,10.0828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.14300613835475,0,0,0,0,0,0,0,0,0,0,0,1.10420759230197,1.93950101254089,0,0,0,0.255457055208591,3.95389910869537,4.19931911695385,2.41433431438823,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.327726629431476,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0.185194527369712,1.13021074202815,1.77702496037333,0.686334519619568,2.03974115992626,3.49878630809145,3.45499934511059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.79634473947353,1.01362607645082,4.62199307241723,4.15746633528944,3.58053391334963,5.36439657909415,4.56742708175882,5.90758108698309,6.15895344683701,6.09654453239999,4.83965688656834,6.43222012882366,6.92725259810372,6.89573722871257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,0,4.73193248037357,5.48457734422955,6.79023442876848,0.0850432901510698,11.7163322417045,11.4927907221132,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,3.52343472721246,0,10.0828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.14300613835475,0,0,0,0,0,0,0,0,0,0,0,1.10420759230197,1.93950101254089,0,0,0,0.255457055208591,3.95389910869537,4.19931911695385,2.41433431438823,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.327726629431476,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0.185194527369712,1.13021074202815,1.77702496037333,0.686334519619568,2.03974115992626,3.49878630809145,3.45499934511059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.79634473947353,1.01362607645082,4.62199307241723,4.15746633528944,3.58053391334963,5.36439657909415,4.56742708175882,5.90758108698309,6.15895344683701,6.09654453239999,4.83965688656834,6.43222012882366,6.92725259810372,6.89573722871257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p@chr17:84174862..84174879,+ | |short_description=p@chr17:84174862..84174879,+ | ||
}} | }} |
Latest revision as of 10:00, 5 August 2015
Short description: | p@chr17:84174862..84174879, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:84174862..84174879, + |
Coexpression cluster: | MCL_coexpression_mm9:900 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.31e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.31e-09 | 32 |
hematopoietic stem cell | 1.31e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.31e-09 | 32 |
common myeloid progenitor | 1.81e-07 | 19 |
megakaryocyte progenitor cell | 2.73e-07 | 6 |
megakaryocyte | 2.73e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.68e-22 | 48 |
immune system | 4.68e-22 | 48 |
hematopoietic system | 1.58e-21 | 45 |
blood island | 1.58e-21 | 45 |
thymus | 2.18e-20 | 23 |
neck | 2.18e-20 | 23 |
respiratory system epithelium | 2.18e-20 | 23 |
hemolymphoid system gland | 2.18e-20 | 23 |
pharyngeal epithelium | 2.18e-20 | 23 |
thymic region | 2.18e-20 | 23 |
pharyngeal gland | 2.18e-20 | 23 |
entire pharyngeal arch endoderm | 2.18e-20 | 23 |
thymus primordium | 2.18e-20 | 23 |
early pharyngeal endoderm | 2.18e-20 | 23 |
hemopoietic organ | 3.18e-20 | 29 |
immune organ | 3.18e-20 | 29 |
pharynx | 2.10e-19 | 24 |
gland of gut | 2.10e-19 | 24 |
upper respiratory tract | 2.10e-19 | 24 |
chordate pharynx | 2.10e-19 | 24 |
pharyngeal arch system | 2.10e-19 | 24 |
pharyngeal region of foregut | 2.10e-19 | 24 |
segment of respiratory tract | 6.80e-17 | 27 |
mixed endoderm/mesoderm-derived structure | 3.98e-16 | 35 |
lateral plate mesoderm | 3.98e-12 | 87 |
craniocervical region | 7.03e-12 | 36 |
respiratory tract | 4.73e-10 | 41 |
respiratory system | 9.71e-10 | 42 |
anterior region of body | 1.93e-09 | 43 |
mesoderm | 2.40e-07 | 120 |
mesoderm-derived structure | 2.40e-07 | 120 |
presumptive mesoderm | 2.40e-07 | 120 |