FFCP PHASE1:Mm9::chr12:83223787..83223791,-: Difference between revisions
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|id=chr12:83223787..83223791,-
|short_description=p@chr12:83223787..83223791,-
|description=CAGE_peak_at_chr12:83223787..83223791,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:83223787..83223791,- | |||
|description=CAGE_peak_at_chr12:83223787..83223791,- | |||
|id=chr12:83223787..83223791,- | |||
|ontology_enrichment_celltype=CL:0002563!8.42e-21!9;CL:0002251!8.42e-21!9;CL:0000239!4.87e-12!6;CL:0000677!4.87e-12!6;CL:0000212!4.87e-12!6;CL:0000584!4.87e-12!6;CL:0002076!5.91e-12!15;CL:0002250!1.08e-10!3;CL:0000075!2.80e-10!7;CL:0000223!1.23e-08!20;CL:0000066!2.59e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.90e-53,3;CL:0002563,2.30e-18,9;CL:0002251,2.30e-18,9;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.87e-32!43;UBERON:0000344!4.03e-31!15;UBERON:0005409!1.19e-26!59;UBERON:0001242!4.78e-26!13;UBERON:0000060!4.78e-26!13;UBERON:0001262!4.78e-26!13;UBERON:0004786!4.78e-26!13;UBERON:0003350!8.42e-21!9;UBERON:0004808!8.42e-21!9;UBERON:0001277!8.42e-21!9;UBERON:0004923!1.97e-18!24;UBERON:0000485!8.81e-17!11;UBERON:0001007!1.02e-11!128;UBERON:0001555!1.02e-11!128;UBERON:0007026!1.02e-11!128;UBERON:0004119!1.87e-11!130;UBERON:0000925!1.87e-11!130;UBERON:0006595!1.87e-11!130;UBERON:0004921!9.27e-10!126;UBERON:0004185!9.27e-10!126;UBERON:0000331!4.01e-09!3;UBERON:0002116!4.01e-09!3;UBERON:0001204!4.01e-09!3;UBERON:0001168!4.01e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.30e-18,9;UBERON:0004808,2.30e-18,9;UBERON:0001277,2.30e-18,9;UBERON:0000485,3.43e-15,11;UBERON:0000160,1.14e-14,31;UBERON:0001242,5.49e-13,13;UBERON:0001262,5.49e-13,13;UBERON:0004786,5.49e-13,13;UBERON:0000344,2.29e-11,15;UBERON:0005409,6.83e-10,47;UBERON:0001155,7.56e-10,2;UBERON:0000059,7.56e-10,2;UBERON:0004923,2.18e-07,24 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,5.77703239502549,3.65716219788683,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0.232236671860439,0.257734922644187,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,5.77703239502549,3.65716219788683,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0.232236671860439,0.257734922644187,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:83223787..83223791,- | |||
}} | }} |
Latest revision as of 08:32, 5 August 2015
Short description: | p@chr12:83223787..83223791, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:83223787..83223791, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.90e-53 | 3 |
intestinal epithelial cell | 2.30e-18 | 9 |
epithelial cell of alimentary canal | 2.30e-18 | 9 |
endo-epithelial cell | 2.29e-11 | 15 |
endodermal cell | 1.01e-08 | 20 |
epithelial cell | 4.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.30e-18 | 9 |
gastrointestinal system epithelium | 2.30e-18 | 9 |
intestinal epithelium | 2.30e-18 | 9 |
simple columnar epithelium | 3.43e-15 | 11 |
intestine | 1.14e-14 | 31 |
intestinal mucosa | 5.49e-13 | 13 |
wall of intestine | 5.49e-13 | 13 |
gastrointestinal system mucosa | 5.49e-13 | 13 |
mucosa | 2.29e-11 | 15 |
gastrointestinal system | 6.83e-10 | 47 |
colon | 7.56e-10 | 2 |
large intestine | 7.56e-10 | 2 |
organ component layer | 2.18e-07 | 24 |