FFCP PHASE1:Mm9::chr14:8849148..8849194,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:8849148..8849194,+ | |||
|description=CAGE_peak_at_chr14:8849148..8849194,+ | |description=CAGE_peak_at_chr14:8849148..8849194,+ | ||
|id=chr14:8849148..8849194,+ | |id=chr14:8849148..8849194,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.24e-13!6;CL:0000677!3.24e-13!6;CL:0000212!3.24e-13!6;CL:0000584!3.24e-13!6;CL:0002563!2.52e-11!9;CL:0002251!2.52e-11!9;CL:0000075!3.30e-11!7;CL:0000066!2.63e-10!25;CL:0000473!1.36e-07!3;CL:0000627!1.36e-07!3;CL:0000682!1.36e-07!3;CL:0000223!2.56e-07!20 | |ontology_enrichment_celltype=CL:0000239!3.24e-13!6;CL:0000677!3.24e-13!6;CL:0000212!3.24e-13!6;CL:0000584!3.24e-13!6;CL:0002563!2.52e-11!9;CL:0002251!2.52e-11!9;CL:0000075!3.30e-11!7;CL:0000066!2.63e-10!25;CL:0000473!1.36e-07!3;CL:0000627!1.36e-07!3;CL:0000682!1.36e-07!3;CL:0000223!2.56e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.87e-10,6;CL:0000677,5.87e-10,6;CL:0000584,5.87e-10,6;CL:0000682,3.51e-09,3;CL:0000075,1.30e-08,7;CL:0002563,8.27e-07,9;CL:0002251,8.27e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.52e-19!15;UBERON:0001242!2.93e-19!13;UBERON:0000060!2.93e-19!13;UBERON:0001262!2.93e-19!13;UBERON:0004786!2.93e-19!13;UBERON:0005409!5.58e-13!59;UBERON:0000160!6.91e-13!43;UBERON:0003350!2.52e-11!9;UBERON:0004808!2.52e-11!9;UBERON:0001277!2.52e-11!9;UBERON:0004923!3.99e-11!24;UBERON:0000485!4.71e-09!11;UBERON:0000331!9.12e-08!3;UBERON:0002116!9.12e-08!3;UBERON:0001204!9.12e-08!3;UBERON:0001168!9.12e-08!3;UBERON:0001007!1.63e-07!128;UBERON:0001555!1.63e-07!128;UBERON:0007026!1.63e-07!128;UBERON:0004119!2.71e-07!130;UBERON:0000925!2.71e-07!130;UBERON:0006595!2.71e-07!130;UBERON:0004921!6.03e-07!126;UBERON:0004185!6.03e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.70e-23,31;UBERON:0005409,3.47e-18,47;UBERON:0001242,2.21e-17,13;UBERON:0001262,2.21e-17,13;UBERON:0004786,2.21e-17,13;UBERON:0000344,4.97e-15,15;UBERON:0001155,1.27e-13,2;UBERON:0000059,1.27e-13,2;UBERON:0000331,9.04e-10,3;UBERON:0002116,9.04e-10,3;UBERON:0001204,9.04e-10,3;UBERON:0001168,9.04e-10,3;UBERON:0004923,2.80e-09,24;UBERON:0001153,4.65e-08,1;UBERON:0001045,4.65e-08,1;UBERON:0002108,1.54e-07,4;UBERON:0003350,8.27e-07,9;UBERON:0004808,8.27e-07,9;UBERON:0001277,8.27e-07,9 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,1.20985684522732,2.00358291978539,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0,1.14846392823004,1.7230479846363,0.861884930743556,7.03086651988583,0.504060259519861,3.32595765982957,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,7.45567044872489,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,1.08069024937347,2.58883655230677,0,0.114248512609729,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.39590163055744,0.909998478779072,1.20985684522732,2.00358291978539,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0,1.14846392823004,1.7230479846363,0.861884930743556,7.03086651988583,0.504060259519861,3.32595765982957,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,7.45567044872489,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,1.08069024937347,2.58883655230677,0,0.114248512609729,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr14:8849148..8849194,+ | |short_description=p@chr14:8849148..8849194,+ | ||
}} | }} |
Latest revision as of 21:32, 4 August 2015
Short description: | p@chr14:8849148..8849194, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:8849148..8849194, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.87e-10 | 6 |
gut absorptive cell | 5.87e-10 | 6 |
enterocyte | 5.87e-10 | 6 |
M cell of gut | 3.51e-09 | 3 |
columnar/cuboidal epithelial cell | 1.30e-08 | 7 |
intestinal epithelial cell | 8.27e-07 | 9 |
epithelial cell of alimentary canal | 8.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.70e-23 | 31 |
gastrointestinal system | 3.47e-18 | 47 |
intestinal mucosa | 2.21e-17 | 13 |
wall of intestine | 2.21e-17 | 13 |
gastrointestinal system mucosa | 2.21e-17 | 13 |
mucosa | 4.97e-15 | 15 |
colon | 1.27e-13 | 2 |
large intestine | 1.27e-13 | 2 |
ileal mucosa | 9.04e-10 | 3 |
ileum | 9.04e-10 | 3 |
mucosa of small intestine | 9.04e-10 | 3 |
wall of small intestine | 9.04e-10 | 3 |
organ component layer | 2.80e-09 | 24 |
caecum | 4.65e-08 | 1 |
midgut | 4.65e-08 | 1 |
small intestine | 1.54e-07 | 4 |
epithelium of mucosa | 8.27e-07 | 9 |
gastrointestinal system epithelium | 8.27e-07 | 9 |
intestinal epithelium | 8.27e-07 | 9 |