FFCP PHASE1:Mm9::chr4:130488310..130488325,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr4:130488310..130488325,+ to FFCP PHASE1:Mm9::chr4:130488310..130488325,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=521 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:130488310..130488325,+ | |||
|description=CAGE_peak_at_chr4:130488310..130488325,+ | |||
|id=chr4:130488310..130488325,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.48e-10!32;CL:0002032!1.48e-10!32;CL:0000037!1.48e-10!32;CL:0000566!1.48e-10!32;CL:0000837!1.48e-10!32;CL:0000838!1.50e-09!12;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000542!1.98e-08!13;CL:0000051!1.98e-08!13;CL:0002031!2.29e-08!25;CL:0000738!5.21e-08!17;CL:0002087!5.21e-08!17;CL:0000791!1.88e-07!9;CL:0000789!1.88e-07!9;CL:0002420!1.88e-07!9;CL:0002419!1.88e-07!9;CL:0000790!1.88e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.99e-15,32;CL:0002032,1.99e-15,32;CL:0000037,1.99e-15,32;CL:0000837,1.99e-15,32;CL:0000838,1.40e-14,12;CL:0002031,1.75e-14,25;CL:0000738,3.49e-14,17;CL:0002087,3.49e-14,17;CL:0000542,2.73e-13,13;CL:0000051,2.73e-13,13;CL:0000084,1.06e-12,11;CL:0000827,1.06e-12,11;CL:0000791,6.12e-10,9;CL:0000789,6.12e-10,9;CL:0002420,6.12e-10,9;CL:0002419,6.12e-10,9;CL:0000790,6.12e-10,9;CL:0002320,2.27e-09,46;CL:0000134,2.27e-09,46;CL:0000624,2.99e-08,8;CL:0000219,2.36e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.19e-18!48;UBERON:0002390!2.43e-16!45;UBERON:0003061!2.43e-16!45;UBERON:0004177!2.97e-14!29;UBERON:0002405!1.62e-13!70;UBERON:0002370!5.61e-11!23;UBERON:0000974!5.61e-11!23;UBERON:0004807!5.61e-11!23;UBERON:0005058!5.61e-11!23;UBERON:0003351!5.61e-11!23;UBERON:0009113!5.61e-11!23;UBERON:0003295!5.61e-11!23;UBERON:0009722!5.61e-11!23;UBERON:0005562!5.61e-11!23;UBERON:0007690!5.61e-11!23;UBERON:0006562!3.59e-10!24;UBERON:0003408!3.59e-10!24;UBERON:0001557!3.59e-10!24;UBERON:0001042!3.59e-10!24;UBERON:0008814!3.59e-10!24;UBERON:0009145!3.59e-10!24;UBERON:0003081!1.12e-09!88;UBERON:0000065!3.96e-09!41;UBERON:0005057!4.20e-09!51;UBERON:0001004!1.17e-08!42;UBERON:0000072!3.76e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.26e-24,48;UBERON:0002405,1.26e-24,48;UBERON:0002390,2.64e-24,45;UBERON:0003061,2.64e-24,45;UBERON:0004177,1.64e-23,29;UBERON:0005057,1.64e-23,29;UBERON:0002370,9.95e-20,23;UBERON:0000974,9.95e-20,23;UBERON:0004807,9.95e-20,23;UBERON:0005058,9.95e-20,23;UBERON:0003351,9.95e-20,23;UBERON:0009113,9.95e-20,23;UBERON:0003295,9.95e-20,23;UBERON:0009722,9.95e-20,23;UBERON:0005562,9.95e-20,23;UBERON:0007690,9.95e-20,23;UBERON:0006562,9.99e-19,24;UBERON:0003408,9.99e-19,24;UBERON:0001557,9.99e-19,24;UBERON:0001042,9.99e-19,24;UBERON:0008814,9.99e-19,24;UBERON:0009145,9.99e-19,24;UBERON:0000077,1.49e-18,35;UBERON:0000072,3.60e-16,27;UBERON:0000065,3.04e-13,41;UBERON:0001004,8.23e-13,42;UBERON:0007811,4.39e-11,36;UBERON:0003081,2.52e-10,87;UBERON:0002384,2.27e-09,46;UBERON:0000153,1.26e-08,43;UBERON:0001041,2.26e-08,80;UBERON:0003929,8.92e-07,55;UBERON:0005911,8.93e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.985521055061667,1.87251621057595,1.54096171402954,0.638177271962691,2.56801094896809,2.71003247498892,0.333109761815663,0.202475267389826,0,2.99689057090326,2.4680598049033,4.2438965179803,0,1.58865521921416,1.30599894569468,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,1.76469446409304,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.04686945442493,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.3575153458869,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0.722996784599558,0,0.323533699894818,2.20841518460394,0.484875253135222,0,0,0,0.255457055208591,2.03685711660064,0.599902730993408,1.27070227073065,0,0,0,0,0,0,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0,0,0.335012514883631,0,0.195133647857799,0.630540576424764,1.10732344824387,0.318909537314974,1.14704320301017,1.72684981865896,0.723245292907558,1.50791283939272,4.89515115436839,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,1.1659233465194,0,1.02522528478712,0.206386867963223,0.925972636848558,1.88368457004691,5.60446333656203,1.37266903923914,3.22959016988325,2.09927178485487,1.93479963326193,0,0,0,0,0.209088296014469,0,0,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,6.95224465381992,0,0.410843828659309,1.94881234466693,1.43221356533985,2.38417625737518,3.846254384639,3.54454865218985,4.54349024766664,5.10585604588499,5.84791873793675,7.21188317474168,6.92725259810372,8.76576766361767,0,0,0,0,0.19318959403219,0.375364950902364,0.915758121336325,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.985521055061667,1.87251621057595,1.54096171402954,0.638177271962691,2.56801094896809,2.71003247498892,0.333109761815663,0.202475267389826,0,2.99689057090326,2.4680598049033,4.2438965179803,0,1.58865521921416,1.30599894569468,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,1.76469446409304,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.04686945442493,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.3575153458869,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0.722996784599558,0,0.323533699894818,2.20841518460394,0.484875253135222,0,0,0,0.255457055208591,2.03685711660064,0.599902730993408,1.27070227073065,0,0,0,0,0,0,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0,0,0.335012514883631,0,0.195133647857799,0.630540576424764,1.10732344824387,0.318909537314974,1.14704320301017,1.72684981865896,0.723245292907558,1.50791283939272,4.89515115436839,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,1.1659233465194,0,1.02522528478712,0.206386867963223,0.925972636848558,1.88368457004691,5.60446333656203,1.37266903923914,3.22959016988325,2.09927178485487,1.93479963326193,0,0,0,0,0.209088296014469,0,0,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,6.95224465381992,0,0.410843828659309,1.94881234466693,1.43221356533985,2.38417625737518,3.846254384639,3.54454865218985,4.54349024766664,5.10585604588499,5.84791873793675,7.21188317474168,6.92725259810372,8.76576766361767,0,0,0,0,0.19318959403219,0.375364950902364,0.915758121336325,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr4:130488310..130488325,+ | |||
}} | }} |
Latest revision as of 20:29, 4 August 2015
Short description: | p@chr4:130488310..130488325, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130488310..130488325, + |
Coexpression cluster: | MCL_coexpression_mm9:521 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.99e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.99e-15 | 32 |
hematopoietic stem cell | 1.99e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.99e-15 | 32 |
lymphoid lineage restricted progenitor cell | 1.40e-14 | 12 |
hematopoietic lineage restricted progenitor cell | 1.75e-14 | 25 |
leukocyte | 3.49e-14 | 17 |
nongranular leukocyte | 3.49e-14 | 17 |
lymphocyte | 2.73e-13 | 13 |
common lymphoid progenitor | 2.73e-13 | 13 |
T cell | 1.06e-12 | 11 |
pro-T cell | 1.06e-12 | 11 |
mature alpha-beta T cell | 6.12e-10 | 9 |
alpha-beta T cell | 6.12e-10 | 9 |
immature T cell | 6.12e-10 | 9 |
mature T cell | 6.12e-10 | 9 |
immature alpha-beta T cell | 6.12e-10 | 9 |
connective tissue cell | 2.27e-09 | 46 |
mesenchymal cell | 2.27e-09 | 46 |
CD4-positive, alpha-beta T cell | 2.99e-08 | 8 |
motile cell | 2.36e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.26e-24 | 48 |
immune system | 1.26e-24 | 48 |
hematopoietic system | 2.64e-24 | 45 |
blood island | 2.64e-24 | 45 |
hemopoietic organ | 1.64e-23 | 29 |
immune organ | 1.64e-23 | 29 |
thymus | 9.95e-20 | 23 |
neck | 9.95e-20 | 23 |
respiratory system epithelium | 9.95e-20 | 23 |
hemolymphoid system gland | 9.95e-20 | 23 |
pharyngeal epithelium | 9.95e-20 | 23 |
thymic region | 9.95e-20 | 23 |
pharyngeal gland | 9.95e-20 | 23 |
entire pharyngeal arch endoderm | 9.95e-20 | 23 |
thymus primordium | 9.95e-20 | 23 |
early pharyngeal endoderm | 9.95e-20 | 23 |
pharynx | 9.99e-19 | 24 |
gland of gut | 9.99e-19 | 24 |
upper respiratory tract | 9.99e-19 | 24 |
chordate pharynx | 9.99e-19 | 24 |
pharyngeal arch system | 9.99e-19 | 24 |
pharyngeal region of foregut | 9.99e-19 | 24 |
mixed endoderm/mesoderm-derived structure | 1.49e-18 | 35 |
segment of respiratory tract | 3.60e-16 | 27 |
respiratory tract | 3.04e-13 | 41 |
respiratory system | 8.23e-13 | 42 |
craniocervical region | 4.39e-11 | 36 |
lateral plate mesoderm | 2.52e-10 | 87 |
connective tissue | 2.27e-09 | 46 |
anterior region of body | 1.26e-08 | 43 |
foregut | 2.26e-08 | 80 |
gut epithelium | 8.92e-07 | 55 |
endo-epithelium | 8.93e-07 | 69 |