FFCP PHASE1:Mm9::chr7:25692688..25692751,+: Difference between revisions
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{{FFCP|EntrezGene=16801|HGNC=|UniProt=D3YVJ9|association_with_transcript=22bp_to_ENSMUST00000151121_5end|description=CAGE_peak_5_at_Arhgef1_5end|id=chr7:25692688..25692751,+|ontology_enrichment_celltype=CL:0000791!1.06e-07!9;CL:0000789!1.06e-07!9;CL:0002420!1.06e-07!9;CL:0002419!1.06e-07!9;CL:0000790!1.06e-07!9;CL:0000624!5.37e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,3.36e-14,9;CL:0000789,3.36e-14,9;CL:0002420,3.36e-14,9;CL:0002419,3.36e-14,9;CL:0000790,3.36e-14,9;CL:0000624,9.36e-13,8;CL:0000084,3.55e-11,11;CL:0000827,3.55e-11,11;CL:0000838,4.78e-10,12;CL:0000893,6.82e-10,6;CL:0002489,6.82e-10,6;CL:0000898,6.82e-10,6;CL:0000809,6.82e-10,6;CL:0000810,6.82e-10,6;CL:0000895,6.82e-10,6;CL:0000808,6.82e-10,6;CL:0000894,6.82e-10,6;CL:0000806,6.82e-10,6;CL:0000807,6.82e-10,6;CL:0000805,6.82e-10,6;CL:0002425,6.82e-10,6;CL:0002436,6.82e-10,6;CL:0002427,6.82e-10,6;CL:0002428,6.82e-10,6;CL:0002429,6.82e-10,6;CL:0002433,6.82e-10,6;CL:0002431,6.82e-10,6;CL:0002432,6.82e-10,6;CL:0000542,4.29e-09,13;CL:0000051,4.29e-09,13;CL:0000738,1.05e-07,17;CL:0002087,1.05e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.55e-18!42;UBERON:0000065!2.66e-18!41;UBERON:0000077!3.46e-13!97;UBERON:0000072!6.09e-13!27;UBERON:0001041!5.94e-12!92;UBERON:0003408!3.68e-11!24;UBERON:0002370!5.87e-11!23;UBERON:0000974!5.87e-11!23;UBERON:0004807!5.87e-11!23;UBERON:0005058!5.87e-11!23;UBERON:0003351!5.87e-11!23;UBERON:0009113!5.87e-11!23;UBERON:0003295!5.87e-11!23;UBERON:0009722!5.87e-11!23;UBERON:0005562!5.87e-11!23;UBERON:0007690!5.87e-11!23;UBERON:0004177!6.14e-11!29;UBERON:0006562!9.76e-11!24;UBERON:0001557!9.76e-11!24;UBERON:0001042!9.76e-11!24;UBERON:0008814!9.76e-11!24;UBERON:0009145!9.76e-11!24;UBERON:0001048!8.89e-09!147;UBERON:0000063!9.51e-09!35;UBERON:0002193!1.38e-08!48;UBERON:0005178!1.96e-08!17;UBERON:0005181!1.96e-08!17;UBERON:0002224!1.96e-08!17;UBERON:0000915!1.96e-08!17;UBERON:0008947!1.96e-08!17;UBERON:0003258!1.96e-08!17;UBERON:0003104!2.31e-08!131;UBERON:0009142!2.31e-08!131;UBERON:0000926!4.05e-08!193;UBERON:0004120!4.05e-08!193;UBERON:0006603!4.05e-08!193;UBERON:0002390!4.64e-08!45;UBERON:0003061!4.64e-08!45;UBERON:0004119!4.15e-07!130;UBERON:0000925!4.15e-07!130;UBERON:0006595!4.15e-07!130;UBERON:0005153!6.89e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.01e-33,41;UBERON:0001004,2.21e-32,42;UBERON:0000072,6.42e-27,27;UBERON:0002370,1.59e-23,23;UBERON:0000974,1.59e-23,23;UBERON:0004807,1.59e-23,23;UBERON:0005058,1.59e-23,23;UBERON:0003351,1.59e-23,23;UBERON:0009113,1.59e-23,23;UBERON:0003295,1.59e-23,23;UBERON:0009722,1.59e-23,23;UBERON:0005562,1.59e-23,23;UBERON:0007690,1.59e-23,23;UBERON:0006562,2.82e-22,24;UBERON:0003408,2.82e-22,24;UBERON:0001557,2.82e-22,24;UBERON:0001042,2.82e-22,24;UBERON:0008814,2.82e-22,24;UBERON:0009145,2.82e-22,24;UBERON:0000153,3.68e-19,43;UBERON:0004177,2.44e-17,29;UBERON:0005057,2.44e-17,29;UBERON:0000077,9.91e-17,35;UBERON:0007811,1.02e-15,36;UBERON:0001041,2.72e-12,80;UBERON:0002193,3.45e-12,48;UBERON:0002405,3.45e-12,48;UBERON:0002390,3.69e-12,45;UBERON:0003061,3.69e-12,45;UBERON:0005911,7.95e-12,69;UBERON:0005178,1.31e-11,17;UBERON:0005181,1.31e-11,17;UBERON:0002224,1.31e-11,17;UBERON:0000915,1.31e-11,17;UBERON:0008947,1.31e-11,17;UBERON:0003258,1.31e-11,17;UBERON:0003081,7.59e-11,87;UBERON:0001048,1.59e-09,134;UBERON:0002048,1.03e-07,14;UBERON:0000117,1.03e-07,14;UBERON:0000171,1.03e-07,14;UBERON:0000170,1.03e-07,14;UBERON:0005597,1.03e-07,14;UBERON:0000118,1.03e-07,14;UBERON:0000926,3.93e-07,120;UBERON:0004120,3.93e-07,120;UBERON:0006603,3.93e-07,120;UBERON:0004119,8.44e-07,118;UBERON:0000925,8.44e-07,118;UBERON:0006595,8.44e-07,118|phase1_expression=2.08193501236232,0,0,0,0,0.671517087647559,0,7.87652272993615,3.09735188733667,4.44722600011788,20.8885921235116,16.113976117058,11.641649635322,13.1130603628496,0.333109761815663,0.404950534779652,0.699561878128147,1.41957974411207,1.50825876966313,0.84877930359606,1.10556277196391,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.671130424230945,11.6057942721815,9.07453257684653,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,0,2.81686839553361,0,0,0,15.5873549528074,21.5355885653834,22.2430755806505,0.22836775943812,3.10725460376606,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,6.67426412882809,0.144599356919912,1.76922110389975,2.75003644910596,1.32504911076236,0,0,0,0.41889341362691,0.255457055208591,0,0,0.254140454146129,0.299581278809645,0,0,0,0,0,0.162241263067758,0.305518091550949,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,1.89106080167819,2.46331573829528,2.41115305670332,2.22437799380478,2.43776516565517,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0.397912944082302,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0.482443521363367,7.02062122633098,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,1.34005005953453,2.38043640886014,7.02481132288076,1.41871629695572,1.32878813789265,2.23236676120482,3.27726629431476,1.55416483679306,4.19482269886384,1.50791283939272,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,0.164970122972535,0,3.39892890616974,1.51161778482376,0.754420319023592,0.885905678642318,0.307435147943927,0.775284879504663,2.18120237686503,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0,0.913394847343798,3.28540391289194,12.921756322693,0.661585194164886,1.81374878235628,0.322928853391811,0.422190474497091,0.358117032009409,0.820704498725306,0,0,0.854354403989263,0,0.185194527369712,0.753473828018764,0.683471138605126,0.686334519619568,0.339956859987711,1.11961161858926,0.967399816630967,0.954670618015114,0.790839983952838,0.203319467126849,0,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0.241584120826006,0,4.4241556887945,2.63542779877213,7.9087437016917,6.62596197186755,5.19177417435696,7.54989148168807,4.44723163223885,4.28299628806274,4.54349024766664,4.95344243257499,3.42809029465258,4.97035191772737,6.83104075646339,7.36324483743884,0.226730383615211,1.55390167361845,1.25599399253266,1.51096154727671,0,1.31377732815827,0,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,1.64834360321323,0.294397840268795,0,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,1.40358965067245,0.429742108096597,2.10417165275728,1.32354851471709,0.695603506861264|short_description=p5@Arhgef1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16801 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YVJ9 | |||
|association_with_transcript=22bp_to_ENSMUST00000151121_5end | |||
|cluster_id=chr7:25692688..25692751,+ | |||
|description=CAGE_peak_5_at_Arhgef1_5end | |||
|id=chr7:25692688..25692751,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.06e-07!9;CL:0000789!1.06e-07!9;CL:0002420!1.06e-07!9;CL:0002419!1.06e-07!9;CL:0000790!1.06e-07!9;CL:0000624!5.37e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.36e-14,9;CL:0000789,3.36e-14,9;CL:0002420,3.36e-14,9;CL:0002419,3.36e-14,9;CL:0000790,3.36e-14,9;CL:0000624,9.36e-13,8;CL:0000084,3.55e-11,11;CL:0000827,3.55e-11,11;CL:0000838,4.78e-10,12;CL:0000893,6.82e-10,6;CL:0002489,6.82e-10,6;CL:0000898,6.82e-10,6;CL:0000809,6.82e-10,6;CL:0000810,6.82e-10,6;CL:0000895,6.82e-10,6;CL:0000808,6.82e-10,6;CL:0000894,6.82e-10,6;CL:0000806,6.82e-10,6;CL:0000807,6.82e-10,6;CL:0000805,6.82e-10,6;CL:0002425,6.82e-10,6;CL:0002436,6.82e-10,6;CL:0002427,6.82e-10,6;CL:0002428,6.82e-10,6;CL:0002429,6.82e-10,6;CL:0002433,6.82e-10,6;CL:0002431,6.82e-10,6;CL:0002432,6.82e-10,6;CL:0000542,4.29e-09,13;CL:0000051,4.29e-09,13;CL:0000738,1.05e-07,17;CL:0002087,1.05e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.55e-18!42;UBERON:0000065!2.66e-18!41;UBERON:0000077!3.46e-13!97;UBERON:0000072!6.09e-13!27;UBERON:0001041!5.94e-12!92;UBERON:0003408!3.68e-11!24;UBERON:0002370!5.87e-11!23;UBERON:0000974!5.87e-11!23;UBERON:0004807!5.87e-11!23;UBERON:0005058!5.87e-11!23;UBERON:0003351!5.87e-11!23;UBERON:0009113!5.87e-11!23;UBERON:0003295!5.87e-11!23;UBERON:0009722!5.87e-11!23;UBERON:0005562!5.87e-11!23;UBERON:0007690!5.87e-11!23;UBERON:0004177!6.14e-11!29;UBERON:0006562!9.76e-11!24;UBERON:0001557!9.76e-11!24;UBERON:0001042!9.76e-11!24;UBERON:0008814!9.76e-11!24;UBERON:0009145!9.76e-11!24;UBERON:0001048!8.89e-09!147;UBERON:0000063!9.51e-09!35;UBERON:0002193!1.38e-08!48;UBERON:0005178!1.96e-08!17;UBERON:0005181!1.96e-08!17;UBERON:0002224!1.96e-08!17;UBERON:0000915!1.96e-08!17;UBERON:0008947!1.96e-08!17;UBERON:0003258!1.96e-08!17;UBERON:0003104!2.31e-08!131;UBERON:0009142!2.31e-08!131;UBERON:0000926!4.05e-08!193;UBERON:0004120!4.05e-08!193;UBERON:0006603!4.05e-08!193;UBERON:0002390!4.64e-08!45;UBERON:0003061!4.64e-08!45;UBERON:0004119!4.15e-07!130;UBERON:0000925!4.15e-07!130;UBERON:0006595!4.15e-07!130;UBERON:0005153!6.89e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.01e-33,41;UBERON:0001004,2.21e-32,42;UBERON:0000072,6.42e-27,27;UBERON:0002370,1.59e-23,23;UBERON:0000974,1.59e-23,23;UBERON:0004807,1.59e-23,23;UBERON:0005058,1.59e-23,23;UBERON:0003351,1.59e-23,23;UBERON:0009113,1.59e-23,23;UBERON:0003295,1.59e-23,23;UBERON:0009722,1.59e-23,23;UBERON:0005562,1.59e-23,23;UBERON:0007690,1.59e-23,23;UBERON:0006562,2.82e-22,24;UBERON:0003408,2.82e-22,24;UBERON:0001557,2.82e-22,24;UBERON:0001042,2.82e-22,24;UBERON:0008814,2.82e-22,24;UBERON:0009145,2.82e-22,24;UBERON:0000153,3.68e-19,43;UBERON:0004177,2.44e-17,29;UBERON:0005057,2.44e-17,29;UBERON:0000077,9.91e-17,35;UBERON:0007811,1.02e-15,36;UBERON:0001041,2.72e-12,80;UBERON:0002193,3.45e-12,48;UBERON:0002405,3.45e-12,48;UBERON:0002390,3.69e-12,45;UBERON:0003061,3.69e-12,45;UBERON:0005911,7.95e-12,69;UBERON:0005178,1.31e-11,17;UBERON:0005181,1.31e-11,17;UBERON:0002224,1.31e-11,17;UBERON:0000915,1.31e-11,17;UBERON:0008947,1.31e-11,17;UBERON:0003258,1.31e-11,17;UBERON:0003081,7.59e-11,87;UBERON:0001048,1.59e-09,134;UBERON:0002048,1.03e-07,14;UBERON:0000117,1.03e-07,14;UBERON:0000171,1.03e-07,14;UBERON:0000170,1.03e-07,14;UBERON:0005597,1.03e-07,14;UBERON:0000118,1.03e-07,14;UBERON:0000926,3.93e-07,120;UBERON:0004120,3.93e-07,120;UBERON:0006603,3.93e-07,120;UBERON:0004119,8.44e-07,118;UBERON:0000925,8.44e-07,118;UBERON:0006595,8.44e-07,118 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.671517087647559,0,7.87652272993615,3.09735188733667,4.44722600011788,20.8885921235116,16.113976117058,11.641649635322,13.1130603628496,0.333109761815663,0.404950534779652,0.699561878128147,1.41957974411207,1.50825876966313,0.84877930359606,1.10556277196391,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.671130424230945,11.6057942721815,9.07453257684653,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,0,2.81686839553361,0,0,0,15.5873549528074,21.5355885653834,22.2430755806505,0.22836775943812,3.10725460376606,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,6.67426412882809,0.144599356919912,1.76922110389975,2.75003644910596,1.32504911076236,0,0,0,0.41889341362691,0.255457055208591,0,0,0.254140454146129,0.299581278809645,0,0,0,0,0,0.162241263067758,0.305518091550949,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,1.89106080167819,2.46331573829528,2.41115305670332,2.22437799380478,2.43776516565517,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0.397912944082302,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0.482443521363367,7.02062122633098,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,1.34005005953453,2.38043640886014,7.02481132288076,1.41871629695572,1.32878813789265,2.23236676120482,3.27726629431476,1.55416483679306,4.19482269886384,1.50791283939272,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,0.164970122972535,0,3.39892890616974,1.51161778482376,0.754420319023592,0.885905678642318,0.307435147943927,0.775284879504663,2.18120237686503,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0,0.913394847343798,3.28540391289194,12.921756322693,0.661585194164886,1.81374878235628,0.322928853391811,0.422190474497091,0.358117032009409,0.820704498725306,0,0,0.854354403989263,0,0.185194527369712,0.753473828018764,0.683471138605126,0.686334519619568,0.339956859987711,1.11961161858926,0.967399816630967,0.954670618015114,0.790839983952838,0.203319467126849,0,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0.241584120826006,0,4.4241556887945,2.63542779877213,7.9087437016917,6.62596197186755,5.19177417435696,7.54989148168807,4.44723163223885,4.28299628806274,4.54349024766664,4.95344243257499,3.42809029465258,4.97035191772737,6.83104075646339,7.36324483743884,0.226730383615211,1.55390167361845,1.25599399253266,1.51096154727671,0,1.31377732815827,0,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,1.64834360321323,0.294397840268795,0,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,1.40358965067245,0.429742108096597,2.10417165275728,1.32354851471709,0.695603506861264 | |||
|short_description=p5@Arhgef1 | |||
}} |
Revision as of 19:43, 4 August 2015
Short description: | p5@Arhgef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Arhgef1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENSMUST00000151121_5end |
EntrezGene: | 16801 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data