FFCP PHASE1:Mm9::chr10:68880312..68880331,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1905 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:68880312..68880331,+ | |||
|description=CAGE_peak_at_chr10:68880312..68880331,+ | |description=CAGE_peak_at_chr10:68880312..68880331,+ | ||
|id=chr10:68880312..68880331,+ | |id=chr10:68880312..68880331,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!2.97e-12!92;UBERON:0003104!1.33e-11!131;UBERON:0009142!1.33e-11!131;UBERON:0000077!7.30e-11!97;UBERON:0005177!2.11e-10!85;UBERON:0000466!2.95e-10!79;UBERON:0000464!4.74e-10!57;UBERON:0009569!8.62e-09!66;UBERON:0002048!1.16e-08!14;UBERON:0000117!1.16e-08!14;UBERON:0000171!1.16e-08!14;UBERON:0000170!1.16e-08!14;UBERON:0005597!1.16e-08!14;UBERON:0000118!1.16e-08!14;UBERON:0005153!5.56e-08!17;UBERON:0004921!6.35e-08!126;UBERON:0004185!6.35e-08!126;UBERON:0001007!8.73e-08!128;UBERON:0001555!8.73e-08!128;UBERON:0007026!8.73e-08!128;UBERON:0001048!1.65e-07!147;UBERON:0004119!2.55e-07!130;UBERON:0000925!2.55e-07!130;UBERON:0006595!2.55e-07!130;UBERON:0002113!3.68e-07!14;UBERON:0003918!3.68e-07!14;UBERON:0005095!3.68e-07!14;UBERON:0007687!3.68e-07!14;UBERON:0002100!6.47e-07!98;UBERON:0005178!8.33e-07!17;UBERON:0005181!8.33e-07!17;UBERON:0002224!8.33e-07!17;UBERON:0000915!8.33e-07!17;UBERON:0008947!8.33e-07!17;UBERON:0003258!8.33e-07!17;UBERON:0000970!8.52e-07!9;UBERON:0000019!8.52e-07!9;UBERON:0000047!8.52e-07!9;UBERON:0004088!8.52e-07!9;UBERON:0002104!8.52e-07!9;UBERON:0001456!8.52e-07!9;UBERON:0003072!8.52e-07!9;UBERON:0003071!8.52e-07!9;UBERON:0004128!8.52e-07!9 | |ontology_enrichment_uberon=UBERON:0001041!2.97e-12!92;UBERON:0003104!1.33e-11!131;UBERON:0009142!1.33e-11!131;UBERON:0000077!7.30e-11!97;UBERON:0005177!2.11e-10!85;UBERON:0000466!2.95e-10!79;UBERON:0000464!4.74e-10!57;UBERON:0009569!8.62e-09!66;UBERON:0002048!1.16e-08!14;UBERON:0000117!1.16e-08!14;UBERON:0000171!1.16e-08!14;UBERON:0000170!1.16e-08!14;UBERON:0005597!1.16e-08!14;UBERON:0000118!1.16e-08!14;UBERON:0005153!5.56e-08!17;UBERON:0004921!6.35e-08!126;UBERON:0004185!6.35e-08!126;UBERON:0001007!8.73e-08!128;UBERON:0001555!8.73e-08!128;UBERON:0007026!8.73e-08!128;UBERON:0001048!1.65e-07!147;UBERON:0004119!2.55e-07!130;UBERON:0000925!2.55e-07!130;UBERON:0006595!2.55e-07!130;UBERON:0002113!3.68e-07!14;UBERON:0003918!3.68e-07!14;UBERON:0005095!3.68e-07!14;UBERON:0007687!3.68e-07!14;UBERON:0002100!6.47e-07!98;UBERON:0005178!8.33e-07!17;UBERON:0005181!8.33e-07!17;UBERON:0002224!8.33e-07!17;UBERON:0000915!8.33e-07!17;UBERON:0008947!8.33e-07!17;UBERON:0003258!8.33e-07!17;UBERON:0000970!8.52e-07!9;UBERON:0000019!8.52e-07!9;UBERON:0000047!8.52e-07!9;UBERON:0004088!8.52e-07!9;UBERON:0002104!8.52e-07!9;UBERON:0001456!8.52e-07!9;UBERON:0003072!8.52e-07!9;UBERON:0003071!8.52e-07!9;UBERON:0004128!8.52e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.92e-17,14;UBERON:0000117,3.92e-17,14;UBERON:0000171,3.92e-17,14;UBERON:0000170,3.92e-17,14;UBERON:0005597,3.92e-17,14;UBERON:0000118,3.92e-17,14;UBERON:0005177,7.65e-17,79;UBERON:0002100,1.11e-13,90;UBERON:0005153,1.55e-13,17;UBERON:0005178,1.55e-13,17;UBERON:0005181,1.55e-13,17;UBERON:0002224,1.55e-13,17;UBERON:0000915,1.55e-13,17;UBERON:0008947,1.55e-13,17;UBERON:0003258,1.55e-13,17;UBERON:0001444,5.66e-12,11;UBERON:0000970,7.73e-12,9;UBERON:0000019,7.73e-12,9;UBERON:0000047,7.73e-12,9;UBERON:0010312,7.73e-12,9;UBERON:0004088,7.73e-12,9;UBERON:0002104,7.73e-12,9;UBERON:0001456,7.73e-12,9;UBERON:0003072,7.73e-12,9;UBERON:0004128,7.73e-12,9;UBERON:0003071,7.73e-12,9;UBERON:0009569,1.74e-11,66;UBERON:0005157,5.00e-11,20;UBERON:0000033,8.14e-10,13;UBERON:0001041,7.54e-09,80;UBERON:0000020,1.85e-08,12;UBERON:0001032,1.85e-08,12;UBERON:0004456,1.85e-08,12;UBERON:0002113,4.76e-08,14;UBERON:0003918,4.76e-08,14;UBERON:0011143,4.76e-08,14;UBERON:0005095,4.76e-08,14;UBERON:0007687,4.76e-08,14;UBERON:0005085,1.11e-07,13;UBERON:0001264,3.90e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0.916554274652847,0.373220911830279,2.77995034277042,3.57751155007006,3.12289063110489,0.229902104433473,1.44049703844279,8.13806016312861,9.32100038373192,13.4519406299092,3.84177070694888,5.43277078551933,0.215567992932842,0.189106080167819,0.351902248327898,0,0.834141747676794,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.232236671860439,0,0.80673409849337,0.889512175379481,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0,0.799739588268102,1.1270773567308,2.8511185898344,2.13347735884388,4.1380133735288,2.46622494784603,5.46157547524528,7.53593893638599,1.97435462274881,0,0,0.196558995113203,0,0,0,0.25462585178142,0,3.56697498905078,0.823684239564244,20.1275489138296,3.72140947668503,2.18426371180192,1.76805214562978,0.717589654087649,0,3.69506380333209,0,0.162964976442026,1.35796068620151,3.98973422090454,4.35516269348721,4.76087281772027,17.7571619550597,5.83250033192907,5.75808193086815,5.89982644032702,13.2729284919748,14.3328534948693,9.40218880779825,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.283880170416537,0.178065603667255,0.488660878060728,0.989820737835213,1.32745138339963,1.69946445308487,0.906970670894253,2.45186603682668,0,1.84461088766356,0.258428293168221,1.81766864738753,4.63446591900138,5.05658812697306,0,2.06271086496374,0,0.540183282093931,0.258717367565509,0.428674070063185,0.177340233642274,1.07021290561242,0.658196082408484,0,0,0,0,0,0.645857706783622,0.0603129249281559,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0,0,0,0,1.90934123603023,0,0.813277868507395,2.16010681643603,3.76358932826044,1.9652630737156,3.50647300600534,1.48776220305605,2.87931536182433,0.388844919875379,4.97071450469541,0,0,0,0,0,0.675824501963113,0.352071715937262,0.911430693907651,0.314578033277133,0.241584120826006,0.288030006257865,0,0.202725215290164,1.33524244314275,1.29920822977795,0.358053391334963,0.79472541912506,0.600977247599844,0.147689527174577,0.605798699688886,0.457240839929999,0.302478555410522,0.682205165178267,0.769694733122636,0.467507608726276,0,0.665957860122194,0,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,1.92551525755089,0,0,0.188626341386076,0.561849044819294,0.384150914429216,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.441596760403192,1.37147700954166,0.354951612318675,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0.916554274652847,0.373220911830279,2.77995034277042,3.57751155007006,3.12289063110489,0.229902104433473,1.44049703844279,8.13806016312861,9.32100038373192,13.4519406299092,3.84177070694888,5.43277078551933,0.215567992932842,0.189106080167819,0.351902248327898,0,0.834141747676794,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.232236671860439,0,0.80673409849337,0.889512175379481,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0,0.799739588268102,1.1270773567308,2.8511185898344,2.13347735884388,4.1380133735288,2.46622494784603,5.46157547524528,7.53593893638599,1.97435462274881,0,0,0.196558995113203,0,0,0,0.25462585178142,0,3.56697498905078,0.823684239564244,20.1275489138296,3.72140947668503,2.18426371180192,1.76805214562978,0.717589654087649,0,3.69506380333209,0,0.162964976442026,1.35796068620151,3.98973422090454,4.35516269348721,4.76087281772027,17.7571619550597,5.83250033192907,5.75808193086815,5.89982644032702,13.2729284919748,14.3328534948693,9.40218880779825,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.283880170416537,0.178065603667255,0.488660878060728,0.989820737835213,1.32745138339963,1.69946445308487,0.906970670894253,2.45186603682668,0,1.84461088766356,0.258428293168221,1.81766864738753,4.63446591900138,5.05658812697306,0,2.06271086496374,0,0.540183282093931,0.258717367565509,0.428674070063185,0.177340233642274,1.07021290561242,0.658196082408484,0,0,0,0,0,0.645857706783622,0.0603129249281559,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0,0,0,0,1.90934123603023,0,0.813277868507395,2.16010681643603,3.76358932826044,1.9652630737156,3.50647300600534,1.48776220305605,2.87931536182433,0.388844919875379,4.97071450469541,0,0,0,0,0,0.675824501963113,0.352071715937262,0.911430693907651,0.314578033277133,0.241584120826006,0.288030006257865,0,0.202725215290164,1.33524244314275,1.29920822977795,0.358053391334963,0.79472541912506,0.600977247599844,0.147689527174577,0.605798699688886,0.457240839929999,0.302478555410522,0.682205165178267,0.769694733122636,0.467507608726276,0,0.665957860122194,0,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,1.92551525755089,0,0,0.188626341386076,0.561849044819294,0.384150914429216,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.441596760403192,1.37147700954166,0.354951612318675,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr10:68880312..68880331,+ | |short_description=p@chr10:68880312..68880331,+ | ||
}} | }} |
Latest revision as of 15:32, 4 August 2015
Short description: | p@chr10:68880312..68880331, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:68880312..68880331, + |
Coexpression cluster: | MCL_coexpression_mm9:1905 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.92e-17 | 14 |
respiratory tube | 3.92e-17 | 14 |
respiration organ | 3.92e-17 | 14 |
pair of lungs | 3.92e-17 | 14 |
lung primordium | 3.92e-17 | 14 |
lung bud | 3.92e-17 | 14 |
trunk region element | 7.65e-17 | 79 |
trunk | 1.11e-13 | 90 |
epithelial bud | 1.55e-13 | 17 |
thoracic cavity element | 1.55e-13 | 17 |
thoracic segment organ | 1.55e-13 | 17 |
thoracic cavity | 1.55e-13 | 17 |
thoracic segment of trunk | 1.55e-13 | 17 |
respiratory primordium | 1.55e-13 | 17 |
endoderm of foregut | 1.55e-13 | 17 |
subdivision of head | 5.66e-12 | 11 |
eye | 7.73e-12 | 9 |
camera-type eye | 7.73e-12 | 9 |
simple eye | 7.73e-12 | 9 |
immature eye | 7.73e-12 | 9 |
ocular region | 7.73e-12 | 9 |
visual system | 7.73e-12 | 9 |
face | 7.73e-12 | 9 |
optic cup | 7.73e-12 | 9 |
optic vesicle | 7.73e-12 | 9 |
eye primordium | 7.73e-12 | 9 |
subdivision of trunk | 1.74e-11 | 66 |
epithelial fold | 5.00e-11 | 20 |
head | 8.14e-10 | 13 |
foregut | 7.54e-09 | 80 |
sense organ | 1.85e-08 | 12 |
sensory system | 1.85e-08 | 12 |
entire sense organ system | 1.85e-08 | 12 |
kidney | 4.76e-08 | 14 |
kidney mesenchyme | 4.76e-08 | 14 |
upper urinary tract | 4.76e-08 | 14 |
kidney rudiment | 4.76e-08 | 14 |
kidney field | 4.76e-08 | 14 |
ectodermal placode | 1.11e-07 | 13 |
pancreas | 3.90e-07 | 12 |