FFCP PHASE1:Mm9::chr12:105578720..105578731,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |MCL_coexpression_id=73 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105578720..105578731,+ | |||
|description=CAGE_peak_at_chr12:105578720..105578731,+ | |description=CAGE_peak_at_chr12:105578720..105578731,+ | ||
|id=chr12:105578720..105578731,+ | |id=chr12:105578720..105578731,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.09e-24!5;CL:0000417!1.09e-24!5;CL:0000668!1.09e-24!5;CL:0000412!1.09e-24!5;CL:0000182!1.09e-24!5;CL:0000414!2.08e-11!11;CL:0000057!7.41e-09!1;CL:0000632!7.41e-09!1 | |ontology_enrichment_celltype=CL:0000181!1.09e-24!5;CL:0000417!1.09e-24!5;CL:0000668!1.09e-24!5;CL:0000412!1.09e-24!5;CL:0000182!1.09e-24!5;CL:0000414!2.08e-11!11;CL:0000057!7.41e-09!1;CL:0000632!7.41e-09!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.77e-32,5;CL:0000057,3.65e-11,1;CL:0000632,3.65e-11,1;CL:0000223,2.36e-08,20;CL:0000066,9.72e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.48e-26!22;UBERON:0007499!1.48e-26!22;UBERON:0006925!1.48e-26!22;UBERON:0009497!1.48e-26!22;UBERON:0000015!1.48e-26!22;UBERON:0002423!1.48e-26!22;UBERON:0006235!1.48e-26!22;UBERON:0008835!1.48e-26!22;UBERON:0003894!1.48e-26!22;UBERON:0004161!1.48e-26!22;UBERON:0008836!1.48e-26!22;UBERON:0009854!2.24e-25!23;UBERON:0009856!2.24e-25!23;UBERON:0002365!2.69e-23!25;UBERON:0002330!2.69e-23!25;UBERON:0003914!4.55e-12!47;UBERON:0005256!4.55e-12!47;UBERON:0005172!1.52e-11!49;UBERON:0005173!1.52e-11!49;UBERON:0002417!1.52e-11!49;UBERON:0000916!1.52e-11!49;UBERON:0005057!4.63e-11!51;UBERON:0003929!3.37e-10!55;UBERON:0002368!2.79e-09!60;UBERON:0002530!1.67e-08!65;UBERON:0000490!2.32e-08!66;UBERON:0009569!2.32e-08!66;UBERON:0005911!5.83e-08!69;UBERON:0002405!7.79e-08!70;UBERON:0000949!1.36e-07!72;UBERON:0000466!7.67e-07!79 | |ontology_enrichment_uberon=UBERON:0002107!1.48e-26!22;UBERON:0007499!1.48e-26!22;UBERON:0006925!1.48e-26!22;UBERON:0009497!1.48e-26!22;UBERON:0000015!1.48e-26!22;UBERON:0002423!1.48e-26!22;UBERON:0006235!1.48e-26!22;UBERON:0008835!1.48e-26!22;UBERON:0003894!1.48e-26!22;UBERON:0004161!1.48e-26!22;UBERON:0008836!1.48e-26!22;UBERON:0009854!2.24e-25!23;UBERON:0009856!2.24e-25!23;UBERON:0002365!2.69e-23!25;UBERON:0002330!2.69e-23!25;UBERON:0003914!4.55e-12!47;UBERON:0005256!4.55e-12!47;UBERON:0005172!1.52e-11!49;UBERON:0005173!1.52e-11!49;UBERON:0002417!1.52e-11!49;UBERON:0000916!1.52e-11!49;UBERON:0005057!4.63e-11!51;UBERON:0003929!3.37e-10!55;UBERON:0002368!2.79e-09!60;UBERON:0002530!1.67e-08!65;UBERON:0000490!2.32e-08!66;UBERON:0009569!2.32e-08!66;UBERON:0005911!5.83e-08!69;UBERON:0002405!7.79e-08!70;UBERON:0000949!1.36e-07!72;UBERON:0000466!7.67e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.99e-28,22;UBERON:0007499,3.99e-28,22;UBERON:0006925,3.99e-28,22;UBERON:0009497,3.99e-28,22;UBERON:0000015,3.99e-28,22;UBERON:0002423,3.99e-28,22;UBERON:0006235,3.99e-28,22;UBERON:0008835,3.99e-28,22;UBERON:0003894,3.99e-28,22;UBERON:0004161,3.99e-28,22;UBERON:0008836,3.99e-28,22;UBERON:0009854,6.69e-27,23;UBERON:0009856,6.69e-27,23;UBERON:0002365,9.58e-25,25;UBERON:0002330,9.58e-25,25;UBERON:0005256,1.10e-13,45;UBERON:0003914,4.30e-13,47;UBERON:0005172,1.50e-12,49;UBERON:0005173,1.50e-12,49;UBERON:0002417,1.50e-12,49;UBERON:0000916,1.50e-12,49;UBERON:0003929,3.75e-11,55;UBERON:0002368,3.36e-10,60;UBERON:0003104,4.99e-10,61;UBERON:0009142,4.99e-10,61;UBERON:0002530,2.16e-09,65;UBERON:0000490,3.03e-09,66;UBERON:0009569,3.03e-09,66;UBERON:0005911,7.89e-09,69;UBERON:0000949,1.90e-08,72;UBERON:0005177,1.15e-07,79;UBERON:0001041,1.45e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.487629785665,20.3991400112325,18.8896117073236,16.8941868536394,7.6164570806547,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,1.79397413521912,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.487629785665,20.3991400112325,18.8896117073236,16.8941868536394,7.6164570806547,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,1.79397413521912,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:105578720..105578731,+ | |short_description=p@chr12:105578720..105578731,+ | ||
}} | }} |
Latest revision as of 15:26, 4 August 2015
Short description: | p@chr12:105578720..105578731, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105578720..105578731, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.77e-32 | 5 |
fibroblast | 3.65e-11 | 1 |
hepatic stellate cell | 3.65e-11 | 1 |
endodermal cell | 2.36e-08 | 20 |
epithelial cell | 9.72e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 3.99e-28 | 22 |
epithelial sac | 3.99e-28 | 22 |
digestive gland | 3.99e-28 | 22 |
epithelium of foregut-midgut junction | 3.99e-28 | 22 |
anatomical boundary | 3.99e-28 | 22 |
hepatobiliary system | 3.99e-28 | 22 |
foregut-midgut junction | 3.99e-28 | 22 |
hepatic diverticulum | 3.99e-28 | 22 |
liver primordium | 3.99e-28 | 22 |
septum transversum | 3.99e-28 | 22 |
liver bud | 3.99e-28 | 22 |
digestive tract diverticulum | 6.69e-27 | 23 |
sac | 6.69e-27 | 23 |
exocrine gland | 9.58e-25 | 25 |
exocrine system | 9.58e-25 | 25 |
trunk mesenchyme | 1.10e-13 | 45 |
epithelial tube | 4.30e-13 | 47 |
abdomen element | 1.50e-12 | 49 |
abdominal segment element | 1.50e-12 | 49 |
abdominal segment of trunk | 1.50e-12 | 49 |
abdomen | 1.50e-12 | 49 |
gut epithelium | 3.75e-11 | 55 |
endocrine gland | 3.36e-10 | 60 |
mesenchyme | 4.99e-10 | 61 |
entire embryonic mesenchyme | 4.99e-10 | 61 |
gland | 2.16e-09 | 65 |
unilaminar epithelium | 3.03e-09 | 66 |
subdivision of trunk | 3.03e-09 | 66 |
endo-epithelium | 7.89e-09 | 69 |
endocrine system | 1.90e-08 | 72 |
trunk region element | 1.15e-07 | 79 |
foregut | 1.45e-07 | 80 |