FFCP PHASE1:Mm9::chr5:4023343..4023357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:4023343..4023357,+ | |||
|description=CAGE_peak_at_chr5:4023343..4023357,+ | |description=CAGE_peak_at_chr5:4023343..4023357,+ | ||
|id=chr5:4023343..4023357,+ | |id=chr5:4023343..4023357,+ | ||
|ontology_enrichment_celltype=CL:0000239!4.44e-08!6;CL:0000677!4.44e-08!6;CL:0000212!4.44e-08!6;CL:0000584!4.44e-08!6 | |ontology_enrichment_celltype=CL:0000239!4.44e-08!6;CL:0000677!4.44e-08!6;CL:0000212!4.44e-08!6;CL:0000584!4.44e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.71e-15,6;CL:0000677,4.71e-15,6;CL:0000584,4.71e-15,6;CL:0000075,7.23e-13,7;CL:0000682,2.66e-10,3;CL:0002563,6.01e-10,9;CL:0002251,6.01e-10,9;CL:0000066,8.63e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.64e-11!15;UBERON:0005409!1.58e-10!59;UBERON:0000160!4.26e-10!43;UBERON:0001242!7.21e-09!13;UBERON:0000060!7.21e-09!13;UBERON:0001262!7.21e-09!13;UBERON:0004786!7.21e-09!13;UBERON:0004923!3.85e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.43e-30,31;UBERON:0000344,1.25e-26,15;UBERON:0005409,1.61e-21,47;UBERON:0001242,3.48e-21,13;UBERON:0001262,3.48e-21,13;UBERON:0004786,3.48e-21,13;UBERON:0004923,6.77e-16,24;UBERON:0002108,7.52e-15,4;UBERON:0000331,1.46e-11,3;UBERON:0002116,1.46e-11,3;UBERON:0001204,1.46e-11,3;UBERON:0001168,1.46e-11,3;UBERON:0003350,6.01e-10,9;UBERON:0004808,6.01e-10,9;UBERON:0001277,6.01e-10,9;UBERON:0001007,1.26e-09,116;UBERON:0001555,1.26e-09,116;UBERON:0007026,1.26e-09,116;UBERON:0004119,2.15e-09,118;UBERON:0000925,2.15e-09,118;UBERON:0006595,2.15e-09,118;UBERON:0001155,2.67e-08,2;UBERON:0000059,2.67e-08,2;UBERON:0000485,4.38e-08,11;UBERON:0004921,9.94e-08,114;UBERON:0001962,2.62e-07,2;UBERON:0001961,2.62e-07,2;UBERON:0001744,2.62e-07,2 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,6.95667686005709,3.00537437967808,2.51818907867835,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.37645568640302,1.72269589234506,1.7230479846363,1.07735616342945,4.3705386474966,6.30075324399827,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,9.31958806090611,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0,1.98251269790279,3.96675849995316,0,0,0,0.605050573870028,0,0,2.37264530772256,1.31759163779209,0,0.795825888164603,0.779856348476481,0.898819408654221,1.72910439899755,5.57595565112228,0,0,1.1270773567308,0.203651327845314,0.387904974335251,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0.32977250588296,0.645857706783622,0.180938774784468,0.477489376012546,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,8.55458823725833,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,1.13365191807606,0,0,0,0.386379188064381,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,2.44282785347553,2.27499619694768,6.95667686005709,3.00537437967808,2.51818907867835,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.37645568640302,1.72269589234506,1.7230479846363,1.07735616342945,4.3705386474966,6.30075324399827,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,9.31958806090611,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0,1.98251269790279,3.96675849995316,0,0,0,0.605050573870028,0,0,2.37264530772256,1.31759163779209,0,0.795825888164603,0.779856348476481,0.898819408654221,1.72910439899755,5.57595565112228,0,0,1.1270773567308,0.203651327845314,0.387904974335251,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0.32977250588296,0.645857706783622,0.180938774784468,0.477489376012546,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,8.55458823725833,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,1.13365191807606,0,0,0,0.386379188064381,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr5:4023343..4023357,+ | |short_description=p@chr5:4023343..4023357,+ | ||
}} | }} |
Latest revision as of 09:57, 4 August 2015
Short description: | p@chr5:4023343..4023357, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:4023343..4023357, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.71e-15 | 6 |
gut absorptive cell | 4.71e-15 | 6 |
enterocyte | 4.71e-15 | 6 |
columnar/cuboidal epithelial cell | 7.23e-13 | 7 |
M cell of gut | 2.66e-10 | 3 |
intestinal epithelial cell | 6.01e-10 | 9 |
epithelial cell of alimentary canal | 6.01e-10 | 9 |
epithelial cell | 8.63e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.43e-30 | 31 |
mucosa | 1.25e-26 | 15 |
gastrointestinal system | 1.61e-21 | 47 |
intestinal mucosa | 3.48e-21 | 13 |
wall of intestine | 3.48e-21 | 13 |
gastrointestinal system mucosa | 3.48e-21 | 13 |
organ component layer | 6.77e-16 | 24 |
small intestine | 7.52e-15 | 4 |
ileal mucosa | 1.46e-11 | 3 |
ileum | 1.46e-11 | 3 |
mucosa of small intestine | 1.46e-11 | 3 |
wall of small intestine | 1.46e-11 | 3 |
epithelium of mucosa | 6.01e-10 | 9 |
gastrointestinal system epithelium | 6.01e-10 | 9 |
intestinal epithelium | 6.01e-10 | 9 |
digestive system | 1.26e-09 | 116 |
digestive tract | 1.26e-09 | 116 |
primitive gut | 1.26e-09 | 116 |
endoderm-derived structure | 2.15e-09 | 118 |
endoderm | 2.15e-09 | 118 |
presumptive endoderm | 2.15e-09 | 118 |
colon | 2.67e-08 | 2 |
large intestine | 2.67e-08 | 2 |
simple columnar epithelium | 4.38e-08 | 11 |
subdivision of digestive tract | 9.94e-08 | 114 |
gut-associated lymphoid tissue | 2.62e-07 | 2 |
mucosa-associated lymphoid tissue | 2.62e-07 | 2 |
lymphoid tissue | 2.62e-07 | 2 |