FFCP PHASE1:Mm9::chr10:3494819..3494821,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1509|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:3494819..3494821,-|id=chr10:3494819..3494821,-|ontology_enrichment_celltype=CL:0000540!1.93e-13!33;CL:0000047!1.93e-13!33;CL:0000031!1.93e-13!33;CL:0000404!1.93e-13!33;CL:0000117!1.55e-12!23;CL:0000337!1.55e-12!23;CL:0000393!4.37e-10!39;CL:0000211!4.37e-10!39;CL:0002319!8.17e-10!43;CL:0000221!2.12e-09!44;CL:0000133!2.12e-09!44;CL:0000055!2.63e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.70e-14,23;CL:0000337,8.70e-14,23;CL:0002614,2.01e-11,3;CL:0000540,5.00e-11,33;CL:0000047,5.00e-11,33;CL:0000031,5.00e-11,33;CL:0000404,5.00e-11,33;CL:0000393,4.89e-09,39;CL:0000211,4.89e-09,39;CL:0002319,5.09e-08,43;CL:0000221,8.55e-08,44;CL:0000133,8.55e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.62e-23!75;UBERON:0001016!7.62e-23!75;UBERON:0001017!4.46e-22!73;UBERON:0005743!4.46e-22!73;UBERON:0002020!1.35e-19!34;UBERON:0001049!1.52e-19!52;UBERON:0005068!1.52e-19!52;UBERON:0006241!1.52e-19!52;UBERON:0007135!1.52e-19!52;UBERON:0002346!2.02e-19!71;UBERON:0003075!2.02e-19!71;UBERON:0007284!2.02e-19!71;UBERON:0004121!5.85e-19!102;UBERON:0000924!5.85e-19!102;UBERON:0006601!5.85e-19!102;UBERON:0000955!2.23e-16!50;UBERON:0006238!2.23e-16!50;UBERON:0002616!1.49e-15!49;UBERON:0002791!4.70e-15!29;UBERON:0003528!4.70e-15!29;UBERON:0001893!4.70e-15!29;UBERON:0000033!1.23e-14!63;UBERON:0003056!6.32e-14!49;UBERON:0003080!6.73e-14!40;UBERON:0002780!5.55e-13!39;UBERON:0001890!5.55e-13!39;UBERON:0006240!5.55e-13!39;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0002420!1.83e-08!8;UBERON:0007245!1.83e-08!8;UBERON:0010009!1.83e-08!8;UBERON:0010011!1.83e-08!8;UBERON:0000454!1.83e-08!8;UBERON:0002619!7.93e-08!17;UBERON:0002298!9.52e-08!6;UBERON:0007811!1.79e-07!86;UBERON:0002240!3.27e-07!6;UBERON:0005174!3.27e-07!6;UBERON:0001137!3.27e-07!6;UBERON:0002021!4.21e-07!10;UBERON:0000411!4.21e-07!10;UBERON:0001950!4.21e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.49e-26,54;UBERON:0001017,7.71e-25,73;UBERON:0001049,1.34e-24,52;UBERON:0005068,1.34e-24,52;UBERON:0006241,1.34e-24,52;UBERON:0007135,1.34e-24,52;UBERON:0001016,4.50e-24,75;UBERON:0002346,2.64e-19,64;UBERON:0003075,2.64e-19,64;UBERON:0007284,2.64e-19,64;UBERON:0000955,3.83e-19,47;UBERON:0006238,3.83e-19,47;UBERON:0004121,3.56e-18,95;UBERON:0000924,3.56e-18,95;UBERON:0006601,3.56e-18,95;UBERON:0002020,7.66e-18,34;UBERON:0002616,2.82e-17,46;UBERON:0010371,1.80e-16,73;UBERON:0002420,7.36e-16,8;UBERON:0007245,7.36e-16,8;UBERON:0010009,7.36e-16,8;UBERON:0010011,7.36e-16,8;UBERON:0000454,7.36e-16,8;UBERON:0003080,4.16e-15,40;UBERON:0002950,4.78e-15,4;UBERON:0001891,4.78e-15,4;UBERON:0009616,4.78e-15,4;UBERON:0010286,4.78e-15,4;UBERON:0002780,3.69e-13,39;UBERON:0001890,3.69e-13,39;UBERON:0006240,3.69e-13,39;UBERON:0003528,7.98e-13,29;UBERON:0002791,7.98e-13,29;UBERON:0001893,7.98e-13,29;UBERON:0010314,2.66e-12,92;UBERON:0003056,7.59e-12,49;UBERON:0002038,2.01e-11,3;UBERON:0009663,2.01e-11,3;UBERON:0009661,2.01e-11,3;UBERON:0000125,2.01e-11,3;UBERON:0002308,2.01e-11,3;UBERON:0003076,8.98e-11,12;UBERON:0003057,8.98e-11,12;UBERON:0002240,4.07e-10,6;UBERON:0005174,4.07e-10,6;UBERON:0001137,4.07e-10,6;UBERON:0000025,3.36e-09,114;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0004111,2.39e-08,122;UBERON:0000369,4.31e-07,5;UBERON:0002435,4.31e-07,5;UBERON:0000204,4.31e-07,5;UBERON:0010082,4.31e-07,5;UBERON:0001948,4.98e-07,5;UBERON:0002315,4.98e-07,5;UBERON:0011216,8.99e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.571301968807607,1.10434270475807,1.34739879136449,0.766763768145891,0,0,2.55374676170375,2.91852413186863,0.395658863190582,0.274462930807229,1.04182674111352,2.51264699101243,3.37657566019008,2.29197371665215,4.12480019663135,4.27115042397309,0.745597783301202,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,5.09288173976397,5.49000723382352,4.02093926761166,2.25971616249959,1.27857728665165,4.77912502486988,4.86723789203273,0,0,0.252722758433675,0.420883711772948,0.130120442962704,0,0.360124259610698,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.411618449517138,0,0,0,0,0,0.403367049246685,0,0,0,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,4.17431533968259,4.57125577709592,0,0,0.94652465824877,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,1.16902343164525,0.395287777946524,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.658196082408484,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.330613822901344,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.188626341386076,0.37456602987953,0.320125762024346,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0,0,0,0.385813221962283,0,0.233931608445408,0.644613162144895,0.57386499620653,0.220591419119515,0|short_description=p@chr10:3494819..3494821,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1509 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:3494819..3494821,- | |||
|description=CAGE_peak_at_chr10:3494819..3494821,- | |||
|id=chr10:3494819..3494821,- | |||
|ontology_enrichment_celltype=CL:0000540!1.93e-13!33;CL:0000047!1.93e-13!33;CL:0000031!1.93e-13!33;CL:0000404!1.93e-13!33;CL:0000117!1.55e-12!23;CL:0000337!1.55e-12!23;CL:0000393!4.37e-10!39;CL:0000211!4.37e-10!39;CL:0002319!8.17e-10!43;CL:0000221!2.12e-09!44;CL:0000133!2.12e-09!44;CL:0000055!2.63e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.70e-14,23;CL:0000337,8.70e-14,23;CL:0002614,2.01e-11,3;CL:0000540,5.00e-11,33;CL:0000047,5.00e-11,33;CL:0000031,5.00e-11,33;CL:0000404,5.00e-11,33;CL:0000393,4.89e-09,39;CL:0000211,4.89e-09,39;CL:0002319,5.09e-08,43;CL:0000221,8.55e-08,44;CL:0000133,8.55e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.62e-23!75;UBERON:0001016!7.62e-23!75;UBERON:0001017!4.46e-22!73;UBERON:0005743!4.46e-22!73;UBERON:0002020!1.35e-19!34;UBERON:0001049!1.52e-19!52;UBERON:0005068!1.52e-19!52;UBERON:0006241!1.52e-19!52;UBERON:0007135!1.52e-19!52;UBERON:0002346!2.02e-19!71;UBERON:0003075!2.02e-19!71;UBERON:0007284!2.02e-19!71;UBERON:0004121!5.85e-19!102;UBERON:0000924!5.85e-19!102;UBERON:0006601!5.85e-19!102;UBERON:0000955!2.23e-16!50;UBERON:0006238!2.23e-16!50;UBERON:0002616!1.49e-15!49;UBERON:0002791!4.70e-15!29;UBERON:0003528!4.70e-15!29;UBERON:0001893!4.70e-15!29;UBERON:0000033!1.23e-14!63;UBERON:0003056!6.32e-14!49;UBERON:0003080!6.73e-14!40;UBERON:0002780!5.55e-13!39;UBERON:0001890!5.55e-13!39;UBERON:0006240!5.55e-13!39;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0002420!1.83e-08!8;UBERON:0007245!1.83e-08!8;UBERON:0010009!1.83e-08!8;UBERON:0010011!1.83e-08!8;UBERON:0000454!1.83e-08!8;UBERON:0002619!7.93e-08!17;UBERON:0002298!9.52e-08!6;UBERON:0007811!1.79e-07!86;UBERON:0002240!3.27e-07!6;UBERON:0005174!3.27e-07!6;UBERON:0001137!3.27e-07!6;UBERON:0002021!4.21e-07!10;UBERON:0000411!4.21e-07!10;UBERON:0001950!4.21e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.49e-26,54;UBERON:0001017,7.71e-25,73;UBERON:0001049,1.34e-24,52;UBERON:0005068,1.34e-24,52;UBERON:0006241,1.34e-24,52;UBERON:0007135,1.34e-24,52;UBERON:0001016,4.50e-24,75;UBERON:0002346,2.64e-19,64;UBERON:0003075,2.64e-19,64;UBERON:0007284,2.64e-19,64;UBERON:0000955,3.83e-19,47;UBERON:0006238,3.83e-19,47;UBERON:0004121,3.56e-18,95;UBERON:0000924,3.56e-18,95;UBERON:0006601,3.56e-18,95;UBERON:0002020,7.66e-18,34;UBERON:0002616,2.82e-17,46;UBERON:0010371,1.80e-16,73;UBERON:0002420,7.36e-16,8;UBERON:0007245,7.36e-16,8;UBERON:0010009,7.36e-16,8;UBERON:0010011,7.36e-16,8;UBERON:0000454,7.36e-16,8;UBERON:0003080,4.16e-15,40;UBERON:0002950,4.78e-15,4;UBERON:0001891,4.78e-15,4;UBERON:0009616,4.78e-15,4;UBERON:0010286,4.78e-15,4;UBERON:0002780,3.69e-13,39;UBERON:0001890,3.69e-13,39;UBERON:0006240,3.69e-13,39;UBERON:0003528,7.98e-13,29;UBERON:0002791,7.98e-13,29;UBERON:0001893,7.98e-13,29;UBERON:0010314,2.66e-12,92;UBERON:0003056,7.59e-12,49;UBERON:0002038,2.01e-11,3;UBERON:0009663,2.01e-11,3;UBERON:0009661,2.01e-11,3;UBERON:0000125,2.01e-11,3;UBERON:0002308,2.01e-11,3;UBERON:0003076,8.98e-11,12;UBERON:0003057,8.98e-11,12;UBERON:0002240,4.07e-10,6;UBERON:0005174,4.07e-10,6;UBERON:0001137,4.07e-10,6;UBERON:0000025,3.36e-09,114;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0004111,2.39e-08,122;UBERON:0000369,4.31e-07,5;UBERON:0002435,4.31e-07,5;UBERON:0000204,4.31e-07,5;UBERON:0010082,4.31e-07,5;UBERON:0001948,4.98e-07,5;UBERON:0002315,4.98e-07,5;UBERON:0011216,8.99e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.571301968807607,1.10434270475807,1.34739879136449,0.766763768145891,0,0,2.55374676170375,2.91852413186863,0.395658863190582,0.274462930807229,1.04182674111352,2.51264699101243,3.37657566019008,2.29197371665215,4.12480019663135,4.27115042397309,0.745597783301202,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,5.09288173976397,5.49000723382352,4.02093926761166,2.25971616249959,1.27857728665165,4.77912502486988,4.86723789203273,0,0,0.252722758433675,0.420883711772948,0.130120442962704,0,0.360124259610698,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.411618449517138,0,0,0,0,0,0.403367049246685,0,0,0,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,4.17431533968259,4.57125577709592,0,0,0.94652465824877,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,1.16902343164525,0.395287777946524,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.658196082408484,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.330613822901344,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.188626341386076,0.37456602987953,0.320125762024346,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0,0,0,0.385813221962283,0,0.233931608445408,0.644613162144895,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr10:3494819..3494821,- | |||
}} |
Latest revision as of 08:11, 4 August 2015
Short description: | p@chr10:3494819..3494821, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3494819..3494821, - |
Coexpression cluster: | MCL_coexpression_mm9:1509 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.70e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.70e-14 | 23 |
neuron of the substantia nigra | 2.01e-11 | 3 |
neuron | 5.00e-11 | 33 |
neuronal stem cell | 5.00e-11 | 33 |
neuroblast | 5.00e-11 | 33 |
electrically signaling cell | 5.00e-11 | 33 |
electrically responsive cell | 4.89e-09 | 39 |
electrically active cell | 4.89e-09 | 39 |
neural cell | 5.09e-08 | 43 |
ectodermal cell | 8.55e-08 | 44 |
neurectodermal cell | 8.55e-08 | 44 |